BLASTX nr result
ID: Rehmannia23_contig00005113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00005113
(345 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHH30431.1| RNA polymerase beta'' subunit (chloroplast) [Bart... 119 2e-30
gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Orig... 119 2e-30
ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ... 119 2e-30
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in... 119 2e-30
gb|ABV65740.1| RNA polymerase beta'' subunit (chloroplast) [Heuc... 118 3e-30
ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) ... 119 3e-30
gb|ABD93751.1| RNA polymerase beta chain [Heuchera sp. Qiu 95076] 118 3e-30
gb|ABQ15068.1| RNA polymerase beta' subunit [Heuchera micrantha] 118 3e-30
gb|ADX99124.1| RNA polymerase beta II subunit [Bouchea fluminensis] 118 3e-30
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 118 4e-30
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 118 4e-30
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 118 4e-30
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 118 4e-30
gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea] gi|3... 118 4e-30
ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast)... 118 4e-30
gb|ABV65777.1| RNA polymerase beta'' subunit (chloroplast) [Stap... 117 4e-30
gb|ADX99117.1| RNA polymerase beta II subunit [Priva cordifolia] 118 4e-30
gb|ABV65776.1| RNA polymerase beta'' subunit, partial (chloropla... 117 5e-30
gb|ABD93799.1| RNA polymerase beta chain [Staphylea trifolia] 117 5e-30
gb|ADX99114.1| RNA polymerase beta II subunit [Lampayo castellani] 118 5e-30
>gb|AHH30431.1| RNA polymerase beta'' subunit (chloroplast) [Bartsia inaequalis]
Length = 1384
Score = 119 bits (299), Expect(2) = 2e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWN+R+TRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1164 RVEGWNKRITRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1223
Query: 306 IS 311
I+
Sbjct: 1224 IT 1225
Score = 38.5 bits (88), Expect(2) = 2e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1125 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1159
>gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 1397
Score = 119 bits (298), Expect(2) = 2e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1175 RVEGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1234
Query: 306 IS 311
I+
Sbjct: 1235 IT 1236
Score = 38.5 bits (88), Expect(2) = 2e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1136 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1170
>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|401879732|gb|AFQ30919.1| RNA polymerase beta subunit-2
(chloroplast) [Salvia miltiorrhiza]
gi|573461941|emb|CCQ71610.1| RNA polymerase beta''
subunit (chloroplast) [Salvia miltiorrhiza]
Length = 1395
Score = 119 bits (298), Expect(2) = 2e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1173 RVEGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1232
Query: 306 IS 311
I+
Sbjct: 1233 IT 1234
Score = 38.5 bits (88), Expect(2) = 2e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1134 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1168
>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
(chloroplast) [Sesamum indicum]
gi|496538591|gb|AGL45326.1| RpoC2 (chloroplast) [Sesamum
indicum]
Length = 1390
Score = 119 bits (298), Expect(2) = 2e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1170 RVEGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1229
Query: 306 IS 311
I+
Sbjct: 1230 IT 1231
Score = 38.5 bits (88), Expect(2) = 2e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1131 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1165
>gb|ABV65740.1| RNA polymerase beta'' subunit (chloroplast) [Heuchera sanguinea]
Length = 1376
Score = 118 bits (295), Expect(2) = 3e-30
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3
Query: 111 IQYRSRKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 290
I R EGWNER+TRILG+PW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE
Sbjct: 1156 INLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 1215
Query: 291 IIVRQIS 311
IIVRQI+
Sbjct: 1216 IIVRQIT 1222
Score = 39.3 bits (90), Expect(2) = 3e-30
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 62 SQGLPKVERVLEVRSIDSISI 124
+QGLPKVE+VLEVRSIDSISI
Sbjct: 1136 TQGLPKVEQVLEVRSIDSISI 1156
>ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) [Lindenbergia
philippensis] gi|557136853|emb|CDI43908.1| RNA polymerase
beta'' subunit (chloroplast) [Lindenbergia philippensis]
Length = 1368
Score = 119 bits (298), Expect(2) = 3e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNE +TRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1162 RVEGWNEHITRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1221
Query: 306 IS 311
I+
Sbjct: 1222 IT 1223
Score = 38.1 bits (87), Expect(2) = 3e-30
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRS+DSIS+
Sbjct: 1123 LITFIYEKSRSGDITQGLPKVEQVLEVRSVDSISM 1157
>gb|ABD93751.1| RNA polymerase beta chain [Heuchera sp. Qiu 95076]
Length = 857
Score = 118 bits (295), Expect(2) = 3e-30
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3
Query: 111 IQYRSRKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 290
I R EGWNER+TRILG+PW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE
Sbjct: 707 INLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 766
Query: 291 IIVRQIS 311
IIVRQI+
Sbjct: 767 IIVRQIT 773
Score = 39.3 bits (90), Expect(2) = 3e-30
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 62 SQGLPKVERVLEVRSIDSISI 124
+QGLPKVE+VLEVRSIDSISI
Sbjct: 687 TQGLPKVEQVLEVRSIDSISI 707
>gb|ABQ15068.1| RNA polymerase beta' subunit [Heuchera micrantha]
Length = 802
Score = 118 bits (295), Expect(2) = 3e-30
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3
Query: 111 IQYRSRKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 290
I R EGWNER+TRILG+PW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE
Sbjct: 667 INLEKRVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 726
Query: 291 IIVRQIS 311
IIVRQI+
Sbjct: 727 IIVRQIT 733
Score = 39.3 bits (90), Expect(2) = 3e-30
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 62 SQGLPKVERVLEVRSIDSISI 124
+QGLPKVE+VLEVRSIDSISI
Sbjct: 647 TQGLPKVEQVLEVRSIDSISI 667
>gb|ADX99124.1| RNA polymerase beta II subunit [Bouchea fluminensis]
Length = 688
Score = 118 bits (296), Expect(2) = 3e-30
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +3
Query: 111 IQYRSRKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 290
+ R +GWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE
Sbjct: 504 LNLEKRVDGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIE 563
Query: 291 IIVRQIS 311
IIVRQI+
Sbjct: 564 IIVRQIT 570
Score = 38.9 bits (89), Expect(2) = 3e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 470 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISL 504
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 118 bits (296), Expect(2) = 4e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1174 RVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1233
Query: 306 IS 311
I+
Sbjct: 1234 IT 1235
Score = 38.5 bits (88), Expect(2) = 4e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1135 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1169
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 118 bits (296), Expect(2) = 4e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1174 RVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1233
Query: 306 IS 311
I+
Sbjct: 1234 IT 1235
Score = 38.5 bits (88), Expect(2) = 4e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1135 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1169
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 118 bits (296), Expect(2) = 4e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1174 RVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1233
Query: 306 IS 311
I+
Sbjct: 1234 IT 1235
Score = 38.5 bits (88), Expect(2) = 4e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1135 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1169
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 118 bits (296), Expect(2) = 4e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1174 RVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1233
Query: 306 IS 311
I+
Sbjct: 1234 IT 1235
Score = 38.5 bits (88), Expect(2) = 4e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1135 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1169
>gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea]
gi|334084477|emb|CBR24610.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|510934394|emb|CCQ09092.1| RNA polymerase beta'' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 1394
Score = 118 bits (296), Expect(2) = 4e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1174 RVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1233
Query: 306 IS 311
I+
Sbjct: 1234 IT 1235
Score = 38.5 bits (88), Expect(2) = 4e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1135 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1169
>ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast) [Olea europaea]
gi|363413081|gb|ADA69916.2| RNA polymerase beta II
subunit (chloroplast) [Olea europaea]
Length = 1390
Score = 118 bits (296), Expect(2) = 4e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1170 RVEGWNERITRILGMPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1229
Query: 306 IS 311
I+
Sbjct: 1230 IT 1231
Score = 38.5 bits (88), Expect(2) = 4e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1131 LITFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM 1165
>gb|ABV65777.1| RNA polymerase beta'' subunit (chloroplast) [Staphylea colchica]
Length = 1390
Score = 117 bits (293), Expect(2) = 4e-30
Identities = 58/66 (87%), Positives = 62/66 (93%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILG+PW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1170 RVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1229
Query: 306 ISYLSL 323
I+ +L
Sbjct: 1230 ITSKAL 1235
Score = 39.7 bits (91), Expect(2) = 4e-30
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
Frame = +2
Query: 20 KKPQIITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
K ++TF ++ +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1127 KGDTLVTFIYVKSRSGDITQGLPKVEQVLEVRSIDSISM 1165
>gb|ADX99117.1| RNA polymerase beta II subunit [Priva cordifolia]
Length = 684
Score = 118 bits (296), Expect(2) = 4e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 123 SRKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVR 302
+R +GWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVR
Sbjct: 504 TRVDGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVR 563
Query: 303 QIS 311
QI+
Sbjct: 564 QIT 566
Score = 38.5 bits (88), Expect(2) = 4e-30
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVERV EVRSIDSIS+
Sbjct: 466 LITFIYEKSRSGDITQGLPKVERVFEVRSIDSISM 500
>gb|ABV65776.1| RNA polymerase beta'' subunit, partial (chloroplast) [Stachyurus
praecox]
Length = 1280
Score = 117 bits (292), Expect(2) = 5e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILG+PW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 1139 RVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 1198
Query: 306 IS 311
I+
Sbjct: 1199 IT 1200
Score = 39.7 bits (91), Expect(2) = 5e-30
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
Frame = +2
Query: 20 KKPQIITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
K ++TF ++ +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 1096 KGDTLVTFIYVKSRSGDITQGLPKVEQVLEVRSIDSISM 1134
>gb|ABD93799.1| RNA polymerase beta chain [Staphylea trifolia]
Length = 866
Score = 117 bits (292), Expect(2) = 5e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R EGWNER+TRILG+PW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 721 RVEGWNERITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 780
Query: 306 IS 311
I+
Sbjct: 781 IT 782
Score = 39.7 bits (91), Expect(2) = 5e-30
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 4/39 (10%)
Frame = +2
Query: 20 KKPQIITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
K ++TF ++ +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 678 KGDTLVTFIYVKSRSGDITQGLPKVEQVLEVRSIDSISM 716
>gb|ADX99114.1| RNA polymerase beta II subunit [Lampayo castellani]
Length = 701
Score = 118 bits (295), Expect(2) = 5e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +3
Query: 126 RKEGWNERLTRILGMPWTFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 305
R +GWNER+TRILGMPW FLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ
Sbjct: 522 RVDGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQ 581
Query: 306 IS 311
I+
Sbjct: 582 IT 583
Score = 38.5 bits (88), Expect(2) = 5e-30
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 4/35 (11%)
Frame = +2
Query: 32 IITFFQMEWQS----QGLPKVERVLEVRSIDSISI 124
+ITF + +S QGLPKVE+VLEVRSIDSIS+
Sbjct: 483 LITFIYEKSRSADITQGLPKVEQVLEVRSIDSISM 517