BLASTX nr result
ID: Rehmannia23_contig00004872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00004872
(389 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-... 50 4e-10
emb|CBI41056.3| unnamed protein product [Vitis vinifera] 50 4e-10
ref|XP_006352383.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 47 1e-09
ref|XP_004250243.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 47 2e-09
dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare] 49 3e-09
gb|EMT21108.1| hypothetical protein F775_19991 [Aegilops tauschii] 49 3e-09
gb|EMS63367.1| E3 ubiquitin-protein ligase COP1 [Triticum urartu] 49 3e-09
gb|EPS63849.1| hypothetical protein M569_10934, partial [Genlise... 45 3e-09
ref|XP_002331573.1| predicted protein [Populus trichocarpa] 46 5e-09
ref|XP_004954056.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 45 2e-08
gb|EXB77009.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis] 44 2e-08
ref|NP_001048254.1| Os02g0771100 [Oryza sativa Japonica Group] g... 46 2e-08
dbj|BAA94422.1| COP1 [Oryza sativa Japonica Group] 46 2e-08
gb|EAZ24764.1| hypothetical protein OsJ_08537 [Oryza sativa Japo... 46 2e-08
gb|EEC74080.1| hypothetical protein OsI_09100 [Oryza sativa Indi... 46 2e-08
ref|XP_006647974.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 46 2e-08
dbj|BAD16847.1| putative COP1, constitutive photomorphogenesis 1... 46 2e-08
gb|AAK49415.1|AF261992_1 COP1, partial [Oryza sativa Indica Group] 46 2e-08
ref|XP_006829490.1| hypothetical protein AMTR_s00074p00101590 [A... 45 3e-08
ref|XP_002454626.1| hypothetical protein SORBIDRAFT_04g034480 [S... 45 3e-08
>ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 687
Score = 50.1 bits (118), Expect(2) = 4e-10
Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 22/64 (34%)
Frame = +3
Query: 126 DSYSARPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDEL 239
D+ S+R G H GLEDFQSVL+TFT+Y SIEFDRDDEL
Sbjct: 340 DTNSSREGYHA--GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEL 397
Query: 240 FATA 251
FATA
Sbjct: 398 FATA 401
Score = 39.7 bits (91), Expect(2) = 4e-10
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIK+FEFSS +P D+ C
Sbjct: 400 TAGVSRRIKVFEFSSVVNEPADVHC 424
>emb|CBI41056.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 50.1 bits (118), Expect(2) = 4e-10
Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 22/64 (34%)
Frame = +3
Query: 126 DSYSARPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDEL 239
D+ S+R G H GLEDFQSVL+TFT+Y SIEFDRDDEL
Sbjct: 255 DTNSSREGYHA--GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEL 312
Query: 240 FATA 251
FATA
Sbjct: 313 FATA 316
Score = 39.7 bits (91), Expect(2) = 4e-10
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIK+FEFSS +P D+ C
Sbjct: 315 TAGVSRRIKVFEFSSVVNEPADVHC 339
>ref|XP_006352383.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Solanum
tuberosum]
Length = 623
Score = 47.0 bits (110), Expect(2) = 1e-09
Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVLSTFT+Y SIEFDRDDELFATA
Sbjct: 287 GLEDFQSVLSTFTRYSSLRVVAELRHSDIFHSANIVSSIEFDRDDELFATA 337
Score = 40.8 bits (94), Expect(2) = 1e-09
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIK+FEFSS +P D QC
Sbjct: 336 TAGVSRRIKVFEFSSVVNEPADAQC 360
>ref|XP_004250243.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Solanum
lycopersicum]
Length = 672
Score = 47.0 bits (110), Expect(2) = 2e-09
Identities = 28/51 (54%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVLSTFT+Y SIEFDRDDELFATA
Sbjct: 336 GLEDFQSVLSTFTRYSRLRVVAELRHSDIFHSANIVSSIEFDRDDELFATA 386
Score = 40.4 bits (93), Expect(2) = 2e-09
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIK+FEFSS +P D QC
Sbjct: 385 TAGVSRRIKVFEFSSVVNKPADAQC 409
>dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 693
Score = 48.5 bits (114), Expect(2) = 3e-09
Identities = 31/59 (52%), Positives = 33/59 (55%), Gaps = 22/59 (37%)
Frame = +3
Query: 141 RPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
R G HE GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 351 REGYHE--GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 407
Score = 38.1 bits (87), Expect(2) = 3e-09
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 406 TAGVSKRIKVFEFSTVVNEPSDVHC 430
>gb|EMT21108.1| hypothetical protein F775_19991 [Aegilops tauschii]
Length = 632
Score = 48.5 bits (114), Expect(2) = 3e-09
Identities = 31/59 (52%), Positives = 33/59 (55%), Gaps = 22/59 (37%)
Frame = +3
Query: 141 RPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
R G HE GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 284 REGYHE--GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 340
Score = 38.1 bits (87), Expect(2) = 3e-09
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 339 TAGVSKRIKVFEFSTVVNEPSDVHC 363
>gb|EMS63367.1| E3 ubiquitin-protein ligase COP1 [Triticum urartu]
Length = 622
Score = 48.5 bits (114), Expect(2) = 3e-09
Identities = 31/59 (52%), Positives = 33/59 (55%), Gaps = 22/59 (37%)
Frame = +3
Query: 141 RPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
R G HE GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 280 REGYHE--GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 336
Score = 38.1 bits (87), Expect(2) = 3e-09
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 335 TAGVSKRIKVFEFSTVVNEPSDVHC 359
>gb|EPS63849.1| hypothetical protein M569_10934, partial [Genlisea aurea]
Length = 472
Score = 44.7 bits (104), Expect(2) = 3e-09
Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 22/52 (42%)
Frame = +3
Query: 162 QGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
+GLEDF SVL+TFT+Y SIEFDRDDELFATA
Sbjct: 191 EGLEDFHSVLTTFTRYSRLRVVAELRHGDLFHSANIVSSIEFDRDDELFATA 242
Score = 42.0 bits (97), Expect(2) = 3e-09
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIKIFEFSS +P D+QC
Sbjct: 241 TAGVSRRIKIFEFSSVVNEPADVQC 265
>ref|XP_002331573.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 45.8 bits (107), Expect(2) = 5e-09
Identities = 27/52 (51%), Positives = 29/52 (55%), Gaps = 22/52 (42%)
Frame = +3
Query: 162 QGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
QGLEDFQSVL+ FT+Y SIEFDRDDELFATA
Sbjct: 266 QGLEDFQSVLTNFTRYSRLRAVAELRHGDLFHSANIVSSIEFDRDDELFATA 317
Score = 40.0 bits (92), Expect(2) = 5e-09
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIKIFEFSS +P D+ C
Sbjct: 316 TAGVSRRIKIFEFSSVMNEPADVHC 340
>ref|XP_004954056.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Setaria italica]
Length = 697
Score = 45.1 bits (105), Expect(2) = 2e-08
Identities = 29/59 (49%), Positives = 32/59 (54%), Gaps = 22/59 (37%)
Frame = +3
Query: 141 RPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
R G H GL+DFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 355 REGYHA--GLQDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 411
Score = 39.3 bits (90), Expect(2) = 2e-08
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFSS +P D+ C
Sbjct: 410 TAGVSKRIKVFEFSSVVNEPSDVHC 434
>gb|EXB77009.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]
Length = 673
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 26/51 (50%), Positives = 28/51 (54%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDE FATA
Sbjct: 337 GLEDFQSVLNTFTRYSRLRVIAELRHGDIFQSANILSSIEFDRDDEFFATA 387
Score = 40.0 bits (92), Expect(2) = 2e-08
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIK+FEFSS +P D+ C
Sbjct: 386 TAGVSRRIKVFEFSSVVNEPADIHC 410
>ref|NP_001048254.1| Os02g0771100 [Oryza sativa Japonica Group]
gi|16151847|gb|AAL14875.1| copI [Oryza sativa]
gi|46805327|dbj|BAD16846.1| COP1, constitutive
photomorphogenesis 1 [Oryza sativa Japonica Group]
gi|113537785|dbj|BAF10168.1| Os02g0771100 [Oryza sativa
Japonica Group] gi|215767107|dbj|BAG99335.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|333943945|dbj|BAK26796.1| E3 ubiquitin-protein ligase
[Oryza sativa Japonica Group]
Length = 685
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 349 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 399
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 398 TAGVSKRIKVFEFSTVVNEPSDVHC 422
>dbj|BAA94422.1| COP1 [Oryza sativa Japonica Group]
Length = 685
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 349 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 399
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 398 TAGVSKRIKVFEFSTVVNEPSDVHC 422
>gb|EAZ24764.1| hypothetical protein OsJ_08537 [Oryza sativa Japonica Group]
Length = 685
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 349 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 399
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 398 TAGVSKRIKVFEFSTVVNEPSDVHC 422
>gb|EEC74080.1| hypothetical protein OsI_09100 [Oryza sativa Indica Group]
Length = 636
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 300 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 350
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 349 TAGVSKRIKVFEFSTVVNEPSDVHC 373
>ref|XP_006647974.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Oryza
brachyantha]
Length = 633
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 297 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 347
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 346 TAGVSKRIKVFEFSTVVNEPSDVHC 370
>dbj|BAD16847.1| putative COP1, constitutive photomorphogenesis 1 [Oryza sativa
Japonica Group]
Length = 604
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 268 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 318
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 317 TAGVSKRIKVFEFSTVVNEPSDVHC 341
>gb|AAK49415.1|AF261992_1 COP1, partial [Oryza sativa Indica Group]
Length = 519
Score = 45.8 bits (107), Expect(2) = 2e-08
Identities = 27/51 (52%), Positives = 29/51 (56%), Gaps = 22/51 (43%)
Frame = +3
Query: 165 GLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
GLEDFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 183 GLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 233
Score = 38.1 bits (87), Expect(2) = 2e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 232 TAGVSKRIKVFEFSTVVNEPSDVHC 256
>ref|XP_006829490.1| hypothetical protein AMTR_s00074p00101590 [Amborella trichopoda]
gi|548834974|gb|ERM96906.1| hypothetical protein
AMTR_s00074p00101590 [Amborella trichopoda]
Length = 686
Score = 45.1 bits (105), Expect(2) = 3e-08
Identities = 29/59 (49%), Positives = 32/59 (54%), Gaps = 22/59 (37%)
Frame = +3
Query: 141 RPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
R G H GLEDFQ+VL+TFT+Y SIEFDRDDELFATA
Sbjct: 344 REGYHA--GLEDFQNVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 400
Score = 38.5 bits (88), Expect(2) = 3e-08
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVSRRIK+FEFS+ +P D+ C
Sbjct: 399 TAGVSRRIKVFEFSTVVNEPADVHC 423
>ref|XP_002454626.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
gi|241934457|gb|EES07602.1| hypothetical protein
SORBIDRAFT_04g034480 [Sorghum bicolor]
Length = 725
Score = 45.1 bits (105), Expect(2) = 3e-08
Identities = 29/59 (49%), Positives = 32/59 (54%), Gaps = 22/59 (37%)
Frame = +3
Query: 141 RPGPHECQGLEDFQSVLSTFTKY----------------------SIEFDRDDELFATA 251
R G H GL+DFQSVL+TFT+Y SIEFDRDDELFATA
Sbjct: 353 REGYHA--GLQDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 409
Score = 38.1 bits (87), Expect(2) = 3e-08
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 253 TAGVSRRIKIFEFSSTPRQPDDLQC 327
TAGVS+RIK+FEFS+ +P D+ C
Sbjct: 408 TAGVSKRIKVFEFSTVVNEPSDVHC 432