BLASTX nr result
ID: Rehmannia23_contig00003953
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00003953
(402 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE06272.1| cyclin D [Scutellaria baicalensis] 107 2e-21
emb|CAB61223.1| cyclin D3b [Antirrhinum majus] 91 2e-16
gb|ACY82355.1| transcription factor cyclin D3b [Opithandra dingh... 88 1e-15
emb|CAA09854.1| cyclin D3.2 protein [Nicotiana tabacum] 61 1e-07
dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis] 61 2e-07
dbj|BAH15073.1| cyclin D3 [Ipomoea batatas] 61 2e-07
gb|EXB59524.1| hypothetical protein L484_009281 [Morus notabilis] 60 3e-07
gb|AAV41032.1| cyclin D-like protein [Nicotiana tabacum] 60 3e-07
ref|XP_002306487.2| cyclin D3-2 family protein [Populus trichoca... 60 4e-07
gb|ABK93388.1| unknown [Populus trichocarpa] 60 4e-07
gb|AAO72990.1| cyclin D [Populus alba] 59 5e-07
emb|CAN88861.1| D3-type cyclin [Populus trichocarpa] 59 5e-07
gb|EOY14366.1| D3-type cyclin isoform 2 [Theobroma cacao] 58 1e-06
gb|EOY14365.1| D3-type cyclin isoform 1 [Theobroma cacao] 58 1e-06
gb|EPS71859.1| hypothetical protein M569_02902, partial [Genlise... 57 2e-06
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera] 55 9e-06
emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera] 55 9e-06
>dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]
Length = 372
Score = 107 bits (267), Expect = 2e-21
Identities = 61/92 (66%), Positives = 66/92 (71%), Gaps = 10/92 (10%)
Frame = -1
Query: 246 LLQNPIFDALYCDEERFDEYV-------LDPEIN---EIHKTPFNFLFEHDLFWEDDELV 97
LLQNPIFDALYCDEERFDE V +PEIN EIH PF FLFEHDLFWE +EL
Sbjct: 11 LLQNPIFDALYCDEERFDECVGGAGSGFKEPEINDFNEIHNNPFAFLFEHDLFWESEELD 70
Query: 96 CLLSKEKKQARCLIYDEIKNSDGSLKMVRNEA 1
LL+KEK Q L +DEI NSD SLK +RNEA
Sbjct: 71 ALLTKEKTQTH-LTFDEI-NSDASLKAMRNEA 100
>emb|CAB61223.1| cyclin D3b [Antirrhinum majus]
Length = 361
Score = 90.5 bits (223), Expect = 2e-16
Identities = 56/95 (58%), Positives = 65/95 (68%), Gaps = 15/95 (15%)
Frame = -1
Query: 243 LQNPIFDALYCDEERFDEYV------LDPE-INEIH-----KTPFN-FLFEHDLFWEDDE 103
LQNPIFDAL C+EE FDE + DP IN+IH + PF FLFEHDL WEDDE
Sbjct: 11 LQNPIFDALLCNEEHFDEDLDLGSGLKDPGFINQIHHNQKKEEPFTTFLFEHDLLWEDDE 70
Query: 102 LVCLLSKEKKQAR--CLIYDEIKNSDGSLKMVRNE 4
LV LLSKEK+Q + L YD++ +SDG LK VRNE
Sbjct: 71 LVNLLSKEKEQEQQAHLGYDDVMDSDGFLKRVRNE 105
>gb|ACY82355.1| transcription factor cyclin D3b [Opithandra dinghushanensis]
Length = 163
Score = 88.2 bits (217), Expect = 1e-15
Identities = 55/91 (60%), Positives = 63/91 (69%), Gaps = 9/91 (9%)
Frame = -1
Query: 246 LLQNPIFDALYCDEERFDEY------VLDPEIN---EIHKTPFNFLFEHDLFWEDDELVC 94
LLQN IFDALYC+EER DE + PEI EI P +FLFE DLFWEDDE+
Sbjct: 6 LLQNSIFDALYCEEERIDEDSSTGFDLKKPEIEDFREICGNPPSFLFERDLFWEDDEVSS 65
Query: 93 LLSKEKKQARCLIYDEIKNSDGSLKMVRNEA 1
LLSKE+ QAR L ++EIK DG LKMVR+EA
Sbjct: 66 LLSKEQTQAR-LSFEEIK-VDGCLKMVRHEA 94
>emb|CAA09854.1| cyclin D3.2 protein [Nicotiana tabacum]
Length = 367
Score = 61.2 bits (147), Expect = 1e-07
Identities = 46/99 (46%), Positives = 55/99 (55%), Gaps = 15/99 (15%)
Frame = -1
Query: 252 FPL---LQNPIFDALYCDEERFDE--------YVLDPEINEIHKT-PFNFLFEHDLFWED 109
FPL L NPIFD LYC+E+RF + L+ N + KT P L E D+FWED
Sbjct: 3 FPLDTQLLNPIFDVLYCEEDRFLDDDDLGEWSSTLEQVGNNVKKTLP---LLECDMFWED 59
Query: 108 DELVCLLSKEKKQ---ARCLIYDEIKNSDGSLKMVRNEA 1
D+LV LL+KEK+ CLI D DG L VR EA
Sbjct: 60 DQLVTLLTKEKESHLGFDCLISD----GDGFLVEVRKEA 94
>dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]
Length = 372
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Frame = -1
Query: 243 LQNP--IFDALYCDEERFD----EYVLDP---EINEIHKTPFNFLFEHDLFWEDDELVCL 91
LQNP +FD LYC+EE F+ EY L+ +E K P FL EHD W+DDELV L
Sbjct: 14 LQNPMFVFDGLYCEEEHFEDDLGEYGLEQGSDNCDENVKGPLVFL-EHDWDWDDDELVSL 72
Query: 90 LSKEKKQARCLIYDEIKNSDGSLKMVRNEA 1
+SKEK+ L + NSD SL + R E+
Sbjct: 73 ISKEKETHLGL---SVLNSDESLMVARRES 99
>dbj|BAH15073.1| cyclin D3 [Ipomoea batatas]
Length = 344
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Frame = -1
Query: 240 QNPIF--DALYCDEERFDEYVLD---------PEINEIHKTPFNFLFEHDLFWEDDELVC 94
+NPIF DAL+C+EERF+E V EI+ + K FL E DLFWEDDEL+
Sbjct: 16 RNPIFSPDALFCEEERFEEDVGGWSRFQTDDYAEISVLKKPLLTFL-ESDLFWEDDELLA 74
Query: 93 LLSKEKKQARCLIYDEIKNSDGSLKMVRNEA 1
LLSKE K C+ D+ SL + RNEA
Sbjct: 75 LLSKE-KDIGCVDLDQ------SLMLARNEA 98
>gb|EXB59524.1| hypothetical protein L484_009281 [Morus notabilis]
Length = 400
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = -1
Query: 243 LQNP--IFDALYCDEERFDEYVLDPEINEIHKTPFNF-LFEHDLFWEDDELVCLLSKEKK 73
LQNP + DAL+C+EE E + + E NEI K P L E+DLFWEDDEL L++KE++
Sbjct: 10 LQNPPMVLDALFCEEEGLGEDLGENEENEIAKKPQALVLLENDLFWEDDELGNLIAKEER 69
Query: 72 QARCLIYDEIKNSDGSLKMVRNEA 1
++ +SDGSL R EA
Sbjct: 70 PWFDFDCGDL-SSDGSLVAARKEA 92
>gb|AAV41032.1| cyclin D-like protein [Nicotiana tabacum]
Length = 367
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 15/99 (15%)
Frame = -1
Query: 252 FPL---LQNPIFDALYCDEERFDE--------YVLDPEINEIHKT-PFNFLFEHDLFWED 109
FPL L NPIFD L+C+E+RF + L+ N + KT P L E D+FWED
Sbjct: 3 FPLDTQLLNPIFDGLFCEEDRFLDDDDLGEWSCTLEQVENNVKKTLP---LLECDMFWED 59
Query: 108 DELVCLLSKEKKQ---ARCLIYDEIKNSDGSLKMVRNEA 1
D+LV LL+KEK+ CLI D DG L VR EA
Sbjct: 60 DQLVTLLAKEKESHLGFDCLISD----GDGLLVEVRKEA 94
>ref|XP_002306487.2| cyclin D3-2 family protein [Populus trichocarpa]
gi|550339244|gb|EEE93483.2| cyclin D3-2 family protein
[Populus trichocarpa]
Length = 371
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Frame = -1
Query: 225 DALYCDEERFDEYV---LDPEINEIHKTPFN-------FLFEHDLFWEDDELVCLLSKEK 76
D LYC+E+ F E LD E +++++ L E DLFWED+EL+ L+SKEK
Sbjct: 19 DGLYCEEDGFGEDYSCSLDDETSQVYEQNVKKEQNLSPVLLEQDLFWEDNELLSLISKEK 78
Query: 75 KQARCLIYDEIKNSDGSLKMVRNEA 1
+ +++D + + DGSL +VR EA
Sbjct: 79 ETH--VVFDSVGSRDGSLMVVRREA 101
>gb|ABK93388.1| unknown [Populus trichocarpa]
Length = 371
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Frame = -1
Query: 225 DALYCDEERFDEYV---LDPEINEIHKTPF-------NFLFEHDLFWEDDELVCLLSKEK 76
D LYC+E+ F E LD E +++++ + L E DLFWED+EL+ L+SKEK
Sbjct: 19 DGLYCEEDGFGEDYSCSLDDETSQVYEQNVKKEQNLSSVLLEQDLFWEDNELLSLISKEK 78
Query: 75 KQARCLIYDEIKNSDGSLKMVRNEA 1
+ ++D + + DGSL +VR EA
Sbjct: 79 ETH--FVFDSVGSRDGSLMVVRREA 101
>gb|AAO72990.1| cyclin D [Populus alba]
Length = 371
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Frame = -1
Query: 225 DALYCDEERFDEYV---LDPEINEIH-------KTPFNFLFEHDLFWEDDELVCLLSKEK 76
D LYC+E+ F E LD E ++++ + + L E DLFWED EL+ L+SKEK
Sbjct: 19 DGLYCEEDGFGEDYSCGLDDETSQVYDQNVKKEQNLSSVLLEQDLFWEDSELLSLISKEK 78
Query: 75 KQARCLIYDEIKNSDGSLKMVRNEA 1
+ +++D + + DGSL +VR EA
Sbjct: 79 ETH--VVFDSVGSRDGSLMVVRREA 101
>emb|CAN88861.1| D3-type cyclin [Populus trichocarpa]
Length = 371
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Frame = -1
Query: 225 DALYCDEERFDEYV---LDPEINEIHKTPFN-------FLFEHDLFWEDDELVCLLSKEK 76
D LYC+E+ F E LD E +++++ L E DLFWED+EL+ L+SKEK
Sbjct: 19 DGLYCEEDGFGEDYSCSLDDETSQVYEQNVKKEQNLSPVLLEQDLFWEDNELLSLISKEK 78
Query: 75 KQARCLIYDEIKNSDGSLKMVRNEA 1
+ ++D + + DGSL +VR EA
Sbjct: 79 ETH--FVFDSVGSRDGSLMVVRREA 101
>gb|EOY14366.1| D3-type cyclin isoform 2 [Theobroma cacao]
Length = 327
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Frame = -1
Query: 231 IFDALYCDEERFDEYVLDPEINEIHK-----------TPFNFLFEHDLFWEDDELVCLLS 85
+ DALYC EE +DE V + E+ + PF L E DLFWEDDEL LLS
Sbjct: 11 VVDALYCSEENWDEEVGEDHFLEVEEESCYNNGINKSNPFPILLEQDLFWEDDELSSLLS 70
Query: 84 KEKKQARCLIYDEIKNSDGSLKMVRNEA 1
KE++ +YD ++ ++G+ R EA
Sbjct: 71 KEEQNQ---LYDSLQ-TNGNPAGARREA 94
>gb|EOY14365.1| D3-type cyclin isoform 1 [Theobroma cacao]
Length = 364
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Frame = -1
Query: 231 IFDALYCDEERFDEYVLDPEINEIHK-----------TPFNFLFEHDLFWEDDELVCLLS 85
+ DALYC EE +DE V + E+ + PF L E DLFWEDDEL LLS
Sbjct: 11 VVDALYCSEENWDEEVGEDHFLEVEEESCYNNGINKSNPFPILLEQDLFWEDDELSSLLS 70
Query: 84 KEKKQARCLIYDEIKNSDGSLKMVRNEA 1
KE++ +YD ++ ++G+ R EA
Sbjct: 71 KEEQNQ---LYDSLQ-TNGNPAGARREA 94
>gb|EPS71859.1| hypothetical protein M569_02902, partial [Genlisea aurea]
Length = 312
Score = 57.0 bits (136), Expect = 2e-06
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = -1
Query: 228 FDALYCDEERFDEYVLDPEINEIHKTPFNFLFEHDLFWEDDELVCLLSKEKKQARCLIYD 49
FDALYC+EE FD+ E + T HDL W+D+E+ LLS+EK+Q C +
Sbjct: 18 FDALYCEEEGFDQ-----EFSSGFTTKDEIHSRHDLIWDDEEISTLLSREKEQ--CRVSY 70
Query: 48 EIKNSDGSLKMVRNEA 1
D SLK RNEA
Sbjct: 71 SAAILDASLKTARNEA 86
>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
Length = 372
Score = 55.1 bits (131), Expect = 9e-06
Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Frame = -1
Query: 246 LLQNPIF--DALYCDEERF--DEYVLDPEINEIHKTPFN--------FLFEHDLFWEDDE 103
L QN F D LYC+EERF D+ E +EI K L EHDLFWEDDE
Sbjct: 9 LSQNAPFFLDGLYCEEERFGDDDDGEVEEASEIEKCDREKKQSLFPLTLLEHDLFWEDDE 68
Query: 102 LVCLLSKEKKQARCLIYDEIKNSDGSLKMVRNEA 1
L L+SKE++ C Y I SDG L + R +A
Sbjct: 69 LCSLISKEEQAHHC--YSGI-ISDGFLTVARTKA 99
>emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
Length = 372
Score = 55.1 bits (131), Expect = 9e-06
Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Frame = -1
Query: 246 LLQNPIF--DALYCDEERF--DEYVLDPEINEIHKTPFN--------FLFEHDLFWEDDE 103
L QN F D LYC+EERF D+ E +EI K L EHDLFWEDDE
Sbjct: 9 LSQNAPFFLDGLYCEEERFGDDDDGEVEEASEIEKCDREKKQSLFPLTLLEHDLFWEDDE 68
Query: 102 LVCLLSKEKKQARCLIYDEIKNSDGSLKMVRNEA 1
L L+SKE++ C Y I SDG L + R +A
Sbjct: 69 LCSLISKEEQAHHC--YSGI-ISDGFLTVARTKA 99