BLASTX nr result
ID: Rehmannia23_contig00003049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00003049
(800 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] 119 2e-24
gb|EMJ03415.1| hypothetical protein PRUPE_ppa008459mg [Prunus pe... 118 2e-24
ref|XP_006381324.1| hypothetical protein POPTR_0006s11790g [Popu... 117 5e-24
gb|AFK41187.1| unknown [Lotus japonicus] 117 6e-24
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni... 117 6e-24
ref|XP_004494140.1| PREDICTED: splicing factor U2af small subuni... 116 8e-24
ref|XP_004251010.1| PREDICTED: splicing factor U2af small subuni... 116 8e-24
ref|XP_006349078.1| PREDICTED: splicing factor U2af small subuni... 116 1e-23
ref|XP_006339114.1| PREDICTED: splicing factor U2af small subuni... 116 1e-23
ref|XP_004249460.1| PREDICTED: uncharacterized protein LOC101263... 116 1e-23
ref|XP_006430311.1| hypothetical protein CICLE_v10012216mg [Citr... 115 1e-23
ref|XP_004303034.1| PREDICTED: splicing factor U2af small subuni... 115 1e-23
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni... 115 1e-23
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni... 115 1e-23
ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, pu... 115 1e-23
ref|XP_006484974.1| PREDICTED: splicing factor U2af small subuni... 115 2e-23
ref|XP_006484971.1| PREDICTED: splicing factor U2af small subuni... 115 2e-23
gb|ESW34844.1| hypothetical protein PHAVU_001G186200g [Phaseolus... 115 2e-23
ref|XP_006424346.1| hypothetical protein CICLE_v10029043mg [Citr... 115 2e-23
ref|XP_006424345.1| hypothetical protein CICLE_v10029043mg [Citr... 115 2e-23
>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 119 bits (297), Expect = 2e-24
Identities = 55/62 (88%), Positives = 56/62 (90%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR+QLF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGRYRR 190
Query: 615 SH 610
H
Sbjct: 191 RH 192
>gb|EMJ03415.1| hypothetical protein PRUPE_ppa008459mg [Prunus persica]
Length = 330
Score = 118 bits (296), Expect = 2e-24
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR++LF R RR
Sbjct: 132 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRNRR 191
Query: 615 SH 610
H
Sbjct: 192 RH 193
>ref|XP_006381324.1| hypothetical protein POPTR_0006s11790g [Populus trichocarpa]
gi|550336026|gb|ERP59121.1| hypothetical protein
POPTR_0006s11790g [Populus trichocarpa]
Length = 311
Score = 117 bits (293), Expect = 5e-24
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR+QLF R RR
Sbjct: 133 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGRNRR 192
>gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 117 bits (292), Expect = 6e-24
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR+LR++LF R +R
Sbjct: 137 GRFYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRRLFGRNKR 196
Query: 615 SHD 607
+D
Sbjct: 197 WND 199
>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 117 bits (292), Expect = 6e-24
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKISRELR+QLF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRELRRQLFGRNRR 190
>ref|XP_004494140.1| PREDICTED: splicing factor U2af small subunit A-like [Cicer
arietinum]
Length = 321
Score = 116 bits (291), Expect = 8e-24
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR+LR++LF R RR
Sbjct: 142 GRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRKRLFGRSRR 201
Query: 615 SHD 607
+D
Sbjct: 202 WND 204
>ref|XP_004251010.1| PREDICTED: splicing factor U2af small subunit A-like [Solanum
lycopersicum]
Length = 309
Score = 116 bits (291), Expect = 8e-24
Identities = 54/62 (87%), Positives = 55/62 (88%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR+QLF R R
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGRYRT 190
Query: 615 SH 610
H
Sbjct: 191 RH 192
>ref|XP_006349078.1| PREDICTED: splicing factor U2af small subunit A-like [Solanum
tuberosum]
Length = 309
Score = 116 bits (290), Expect = 1e-23
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR+QLF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGRYRR 190
>ref|XP_006339114.1| PREDICTED: splicing factor U2af small subunit B-like [Solanum
tuberosum]
Length = 350
Score = 116 bits (290), Expect = 1e-23
Identities = 56/65 (86%), Positives = 57/65 (87%), Gaps = 3/65 (4%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLF---RR 625
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR+QLF R
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGKSSR 190
Query: 624 GRRSH 610
RRSH
Sbjct: 191 RRRSH 195
>ref|XP_004249460.1| PREDICTED: uncharacterized protein LOC101263952 [Solanum
lycopersicum]
Length = 497
Score = 116 bits (290), Expect = 1e-23
Identities = 56/65 (86%), Positives = 57/65 (87%), Gaps = 3/65 (4%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLF---RR 625
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR+QLF R
Sbjct: 278 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGKSSR 337
Query: 624 GRRSH 610
RRSH
Sbjct: 338 RRRSH 342
>ref|XP_006430311.1| hypothetical protein CICLE_v10012216mg [Citrus clementina]
gi|567875445|ref|XP_006430312.1| hypothetical protein
CICLE_v10012216mg [Citrus clementina]
gi|568856674|ref|XP_006481905.1| PREDICTED: splicing
factor U2af small subunit B-like isoform X1 [Citrus
sinensis] gi|568856676|ref|XP_006481906.1| PREDICTED:
splicing factor U2af small subunit B-like isoform X2
[Citrus sinensis] gi|557532368|gb|ESR43551.1|
hypothetical protein CICLE_v10012216mg [Citrus
clementina] gi|557532369|gb|ESR43552.1| hypothetical
protein CICLE_v10012216mg [Citrus clementina]
Length = 320
Score = 115 bits (289), Expect = 1e-23
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR++LF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR 190
>ref|XP_004303034.1| PREDICTED: splicing factor U2af small subunit B-like [Fragaria
vesca subsp. vesca]
Length = 321
Score = 115 bits (289), Expect = 1e-23
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR++LF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRNRR 190
>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 115 bits (289), Expect = 1e-23
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR++LF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR 190
>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 115 bits (289), Expect = 1e-23
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR++LF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR 190
>ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis] gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary
factor, small subunit, putative [Ricinus communis]
Length = 313
Score = 115 bits (289), Expect = 1e-23
Identities = 53/60 (88%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR++LF R RR
Sbjct: 133 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRNRR 192
>ref|XP_006484974.1| PREDICTED: splicing factor U2af small subunit A-like isoform X4
[Citrus sinensis]
Length = 313
Score = 115 bits (287), Expect = 2e-23
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISR+LR+QLF R RR
Sbjct: 124 GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRR 183
Query: 615 SH 610
H
Sbjct: 184 RH 185
>ref|XP_006484971.1| PREDICTED: splicing factor U2af small subunit A-like isoform X1
[Citrus sinensis] gi|568863042|ref|XP_006484972.1|
PREDICTED: splicing factor U2af small subunit A-like
isoform X2 [Citrus sinensis]
gi|568863044|ref|XP_006484973.1| PREDICTED: splicing
factor U2af small subunit A-like isoform X3 [Citrus
sinensis]
Length = 320
Score = 115 bits (287), Expect = 2e-23
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISR+LR+QLF R RR
Sbjct: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRR 190
Query: 615 SH 610
H
Sbjct: 191 RH 192
>gb|ESW34844.1| hypothetical protein PHAVU_001G186200g [Phaseolus vulgaris]
Length = 315
Score = 115 bits (287), Expect = 2e-23
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR+LR++LF R RR
Sbjct: 135 GRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDLRRKLFGRNRR 194
>ref|XP_006424346.1| hypothetical protein CICLE_v10029043mg [Citrus clementina]
gi|557526280|gb|ESR37586.1| hypothetical protein
CICLE_v10029043mg [Citrus clementina]
Length = 265
Score = 115 bits (287), Expect = 2e-23
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISR+LR+QLF R RR
Sbjct: 74 GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRR 133
Query: 615 SH 610
H
Sbjct: 134 RH 135
>ref|XP_006424345.1| hypothetical protein CICLE_v10029043mg [Citrus clementina]
gi|567863386|ref|XP_006424347.1| hypothetical protein
CICLE_v10029043mg [Citrus clementina]
gi|557526279|gb|ESR37585.1| hypothetical protein
CICLE_v10029043mg [Citrus clementina]
gi|557526281|gb|ESR37587.1| hypothetical protein
CICLE_v10029043mg [Citrus clementina]
Length = 272
Score = 115 bits (287), Expect = 2e-23
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = -3
Query: 795 GRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRQQLFRRGRR 616
GR Y GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISR+LR+QLF R RR
Sbjct: 81 GRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRDLRRQLFGRYRR 140
Query: 615 SH 610
H
Sbjct: 141 RH 142