BLASTX nr result

ID: Rehmannia23_contig00002438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00002438
         (509 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g...    71   1e-10
ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g...    68   1e-09
gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlise...    64   3e-08
ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g...    58   1e-06

>ref|XP_006350524.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
           tuberosum]
          Length = 669

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/82 (52%), Positives = 46/82 (56%)
 Frame = +2

Query: 263 MDRSRSKRYYYDQDYESETLHSRNKPRYGNNSXXXXXXXXYAPSYHRRXXXXXXXXXXXX 442
           MDRSRSKRYYYDQDYESE L  R K RY N          YAP++HRR            
Sbjct: 1   MDRSRSKRYYYDQDYESENL-PRTKQRYNN-------PHHYAPTHHRR----------PV 42

Query: 443 XXXXXXXRKMQDPTLMVTTSYR 508
                  RKMQDP LMVTT+YR
Sbjct: 43  SGGGGGGRKMQDPALMVTTTYR 64


>ref|XP_004234980.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
           lycopersicum]
          Length = 668

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/82 (51%), Positives = 44/82 (53%)
 Frame = +2

Query: 263 MDRSRSKRYYYDQDYESETLHSRNKPRYGNNSXXXXXXXXYAPSYHRRXXXXXXXXXXXX 442
           MDRSRSKRYYYDQDYESE L  R K RY N          YAP+ H R            
Sbjct: 1   MDRSRSKRYYYDQDYESENL-PRTKQRYNN-------PHHYAPTAHHR---------RPV 43

Query: 443 XXXXXXXRKMQDPTLMVTTSYR 508
                  RKMQDP LMVTT+YR
Sbjct: 44  SGGGGGGRKMQDPALMVTTTYR 65


>gb|EPS68840.1| hypothetical protein M569_05927, partial [Genlisea aurea]
          Length = 541

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 ESHMDRSRSKRYYYDQDYESETLHSRNKPRYGNNSXXXXXXXXYAPS-YHRRXXXXXXXX 430
           +S M+RSRSKRYY+DQDY+SE    RNKPRYG+NS        + P+ Y RR        
Sbjct: 2   KSGMERSRSKRYYHDQDYDSEPFQPRNKPRYGSNSQGGGVGAHHYPAGYDRR-------- 53

Query: 431 XXXXXXXXXXXRKMQDPTLMVTTSYR 508
                      RK  D ++MVTTSYR
Sbjct: 54  -ISPAAGGGGPRKTHD-SVMVTTSYR 77


>ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 661

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +2

Query: 263 MDRSRSKR-YYYDQDYESETLHSRNKPRYGNNSXXXXXXXXYAPSYHRRXXXXXXXXXXX 439
           MDRSRSKR Y+Y+QDY+SETL  R KPRY NN+           S+HRR           
Sbjct: 1   MDRSRSKRGYFYEQDYDSETL-GRTKPRYNNNNNHGGHHYN-TNSHHRR----------- 47

Query: 440 XXXXXXXXRKMQDPTLMVTTSYR 508
                    K+QD ++MVTTSYR
Sbjct: 48  GGAGAGRASKLQDSSVMVTTSYR 70


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