BLASTX nr result

ID: Rehmannia23_contig00002315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00002315
         (367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ24933.1| hypothetical protein PRUPE_ppa010446mg [Prunus pe...    59   9e-07
ref|XP_006347279.1| PREDICTED: gamma-secretase subunit APH1-like...    57   3e-06
ref|XP_004241399.1| PREDICTED: gamma-secretase subunit APH1-like...    57   3e-06
gb|EXB68655.1| Gamma-secretase subunit APH1-like protein [Morus ...    56   4e-06
ref|XP_004309614.1| PREDICTED: gamma-secretase subunit APH1-like...    56   4e-06
ref|XP_004309613.1| PREDICTED: gamma-secretase subunit APH1-like...    56   4e-06
ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ric...    55   1e-05

>gb|EMJ24933.1| hypothetical protein PRUPE_ppa010446mg [Prunus persica]
          Length = 249

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -3

Query: 365 GCMIGIPLLYGIAILTLAHCGKTVWTTLTQNRSR 264
           GC+IGIPLLY IAILTL HCGK VW  LT+NR R
Sbjct: 212 GCIIGIPLLYFIAILTLLHCGKMVWRRLTENRGR 245


>ref|XP_006347279.1| PREDICTED: gamma-secretase subunit APH1-like [Solanum tuberosum]
          Length = 253

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = -3

Query: 365 GCMIGIPLLYGIAILTLAHCGKTVWTTLTQNRSRVENF 252
           GCMIGIPLLY +AI+TL HCGK  W  L   RSR  NF
Sbjct: 212 GCMIGIPLLYCVAIVTLVHCGKMAWRRLIDTRSREGNF 249


>ref|XP_004241399.1| PREDICTED: gamma-secretase subunit APH1-like [Solanum lycopersicum]
          Length = 253

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -3

Query: 365 GCMIGIPLLYGIAILTLAHCGKTVWTTLTQNRSRVENF 252
           GCMIGIPLLY +AI+TL HCGK  W  L ++R+R  NF
Sbjct: 212 GCMIGIPLLYCVAIVTLVHCGKMAWRRLIESRNREGNF 249


>gb|EXB68655.1| Gamma-secretase subunit APH1-like protein [Morus notabilis]
          Length = 207

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -3

Query: 365 GCMIGIPLLYGIAILTLAHCGKTVWTTLTQNRSR 264
           GC+IGIPL+Y +AILTL HCGK VW  LT++RSR
Sbjct: 170 GCVIGIPLVYIVAILTLLHCGKMVWRKLTEDRSR 203


>ref|XP_004309614.1| PREDICTED: gamma-secretase subunit APH1-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 221

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -3

Query: 365 GCMIGIPLLYGIAILTLAHCGKTVWTTLTQNRSR 264
           GC+IGIPLLY IA+ TL HCGK VW  LT+NR R
Sbjct: 185 GCIIGIPLLYFIAVFTLLHCGKMVWRRLTENRHR 218


>ref|XP_004309613.1| PREDICTED: gamma-secretase subunit APH1-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 246

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = -3

Query: 365 GCMIGIPLLYGIAILTLAHCGKTVWTTLTQNRSR 264
           GC+IGIPLLY IA+ TL HCGK VW  LT+NR R
Sbjct: 210 GCIIGIPLLYFIAVFTLLHCGKMVWRRLTENRHR 243


>ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
           gi|223525827|gb|EEF28266.1| gamma-secretase subunit
           aph-1, putative [Ricinus communis]
          Length = 249

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = -3

Query: 365 GCMIGIPLLYGIAILTLAHCGKTVWTTLTQNRSRVEN 255
           GC++GIPLLY IAILTL  CGK VW  LT+NRS   N
Sbjct: 212 GCVVGIPLLYFIAILTLLQCGKMVWRRLTENRSTQMN 248


Top