BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00002174
         (1972 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...   165   7e-57
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...   143   1e-49
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314...   127   2e-44
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]   105   2e-40
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...   115   1e-39
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...   135   2e-38
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    84   3e-32
gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]    90   2e-31
gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]   105   4e-31
gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob...    82   8e-31
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              99   4e-30
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              99   4e-30
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              97   1e-29
ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306...    94   8e-29
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...   132   4e-28
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    79   8e-28
gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]   101   2e-27
ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595...    85   2e-27
gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]   100   7e-27
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A...   126   3e-26

>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score =  165 bits (417), Expect(2) = 7e-57
 Identities = 84/245 (34%), Positives = 140/245 (57%), Gaps = 2/245 (0%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            +Y+WP++LL+++E+  RNF+W+GDI+++G  +V+WT CC+P +EGGLG++ L   N + +
Sbjct: 312  VYEWPVSLLRKVERWCRNFLWSGDIDKRGIPLVSWTSCCAPIDEGGLGLKKLDVLNSSLL 371

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLPSSIWAGLRPTVEDCQTDSRWIPGAH 756
            +K  W++ TS       +R RF     S RRS+ PSSIW G+R      Q ++RW+ G  
Sbjct: 372  LKRCWEIFTSSFEGCCFIRNRF-----SKRRSYAPSSIWPGVRKFWGLVQNNTRWLVGTG 426

Query: 757  SSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIVRDIV 936
              ++FW DN+LG  + +  G  H    +  + +SD+  +  W L          +   I 
Sbjct: 427  DKISFWRDNFLGRPLIEFFG-NHGALNDNSSLVSDYIDNGSWVLPPLLQLNLSAVCNLIC 485

Query: 937  RCPIA--PDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVVVW 1110
            + PI+  P   DK +W  S  G +T+K A+ F++ + P V WG  +WS +I  R ++  W
Sbjct: 486  QVPISINPSMEDKLIWQASSTGELTAKQAFLFLQQASPVVPWGKPLWSKFILPRMSLHAW 545

Query: 1111 RAIFG 1125
            + + G
Sbjct: 546  KVMRG 550



 Score = 85.1 bits (209), Expect(2) = 7e-57
 Identities = 43/122 (35%), Positives = 64/122 (52%)
 Frame = +3

Query: 12  LKPFMAPRNIVFPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFF 191
           +K   +PR  + PS +L+A D+++ C     N   +      Y S+SGQ+ N  KS+VF 
Sbjct: 171 VKRIHSPRGTLSPSYVLFAGDVIVFCRGNRQNLLRVMSFFYEYGSVSGQIINKDKSQVFI 230

Query: 192 GTRVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSS 371
           G       RH I   +G+ +G+ P  YLG PIF G P+    + + DK+ +K   W GS 
Sbjct: 231 GKHNRR--RHSISDCLGIPLGTAPFMYLGAPIFHGKPRVAHFQAIVDKVRLKLSSWVGSF 288

Query: 372 LS 377
           LS
Sbjct: 289 LS 290



 Score =  129 bits (324), Expect = 5e-27
 Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 5/236 (2%)
 Frame = +3

Query: 1278 SAQIAFLWRVAIVSCIWLIWHIRNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNT 1457
            S Q+  LW +   S +W IWH RN + F+ + ++       +   I  S+ L  G M NT
Sbjct: 622  SPQLKELWLICFTSILWYIWHARNQIRFDSRTFSVAGVCRLVSRHIQASSRLATGHMHNT 681

Query: 1458 QEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYR 1637
              DL  L       R  + PR++ V W  P  GWIK+N DG+     G      +FR Y+
Sbjct: 682  IHDLCILKSFGACCRSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVFRYYK 741

Query: 1638 GFFRGCFVE--XXXXXXXXXXXXXXXXXXYAFRKGWTNIWLESDSTYVVGLLRSQTGSIP 1811
            G F G F                       A+ + W ++WLE D + V+  +RS +  +P
Sbjct: 742  GQFVGAFASHIDIPSSIAAKVMVVITAIELAWVRDWKHVWLEVDFSTVLDYIRSPS-LVP 800

Query: 1812 WRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPPMDII 1970
            W+L  +W   L+ +S M    SHI+REGNRVAD L+      S   WWD PP  I+
Sbjct: 801  WQLRVRWLNCLYRISTMTFKSSHIFREGNRVADALANHGTSMSEEVWWDVPPSFIL 856


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 751

 Score =  143 bits (360), Expect(2) = 1e-49
 Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 2/241 (0%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            IY W  +LL  L    RNFIW+GD+  +  V ++W + C+P+NE GL +R+L +   A +
Sbjct: 252  IYLWATSLLSHLSACARNFIWSGDLAIRKLVTISWQQVCTPRNEAGLDLRNLKALYTAGL 311

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLPSSIWAGLRPTVEDCQTDSRWIPGAH 756
            + + W+ L   S       RRF +    ++  +  SS+W GL+  +      SRWI G  
Sbjct: 312  ISLAWQTLLQSSSWGSFACRRFTIFR-HMKFQYFTSSVWHGLKRVLPLLFEHSRWIIGDG 370

Query: 757  SSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIVRDIV 936
            +S+ FW+D WL   I  ++ +         + ++DF +D +W L   F   + D  + I+
Sbjct: 371  NSILFWSDKWLHSSIIQQLNM-GSLSHLLNSRVADFIWDQQWALPSHFSNLFPDCAKQIL 429

Query: 937  RCPI--APDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVVVW 1110
              P+   P+S D  +W  S  G  +    Y  +RP F  + W S +W  +IP R +V+ W
Sbjct: 430  EIPLPNTPES-DILIWEHSSSGIFSFSDGYELVRPYFEKLDWASSVWHSFIPPRYSVLAW 488

Query: 1111 R 1113
            R
Sbjct: 489  R 489



 Score = 82.8 bits (203), Expect(2) = 1e-49
 Identities = 43/107 (40%), Positives = 61/107 (57%)
 Frame = +3

Query: 57  MLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQTI 236
           +LYADD+ I C   + + R +   L +Y + SGQ+ N  KS  + G    H  RH+++ I
Sbjct: 125 VLYADDLFIFCRGDTKSLRQLQSFLDNYGAASGQLVNKDKSTFYLGASHFHR-RHQVKKI 183

Query: 237 MGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
           +G  +G+ P +YLGVPIFKG P    L+ L DK   +   WKG  LS
Sbjct: 184 LGFKLGTSPFSYLGVPIFKGKPCRKHLQALVDKAKARLAGWKGKLLS 230



 Score = 80.9 bits (198), Expect = 2e-12
 Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
 Frame = +3

Query: 1173 FAGALWDWIAGSFAVAFRNVYSFNDFMVHLMEFHFSAQIAFLWRVAIVSCIWLIWHIRND 1352
            FA  +W W+A  F  +  +  S ND    +    FS Q+  +W  + +  +  IW   N 
Sbjct: 532  FAQHIWQWLAYYFGTSLPSSGSLNDLWSSVTGKAFSPQLKNIWFASCLFALMAIWKSHNK 591

Query: 1353 VIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQED-LLCLHRLKVSGRPPKAPRIIP 1529
            + F++K  +       ++A +   A    GC++   +  +L    + +  +   A RI  
Sbjct: 592  LRFDNKQPSLMRVFRSVKAWVRYIAPYTPGCVRGVLDSKVLSSMGVILVLKCQSALRI-- 649

Query: 1530 VPWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYRGFFRGCFVE--XXXXXXXXXXXXX 1703
            V W  PL  W+K+N +G + G PG     G+FR   G   G + +               
Sbjct: 650  VLWHPPLIPWLKLNTNGFSKGNPGLAGCGGVFRDSFGRLIGGYCQGLGTQTTFFVELMTV 709

Query: 1704 XXXXXYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPW 1814
                 +AF  GW +IWLESDST ++  + S + + PW
Sbjct: 710  ILGVEFAFHFGWHHIWLESDSTTILQCISSSSFAPPW 746


>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
            subsp. vesca]
          Length = 839

 Score =  127 bits (318), Expect(2) = 2e-44
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
 Frame = +1

Query: 493  VNWTRCCSPKNEGGLGVRSLISANRAFIMKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRS 672
            V W +CC+P  EGGLGVR++++ N+AF++K  W  LT  +        RFL  +G     
Sbjct: 432  VAWKKCCAPLKEGGLGVRNIMALNQAFLLKKFWDFLTKSTTAAAFFSARFLQRSGQPCSY 491

Query: 673  FLPSSIWAGLRPTVEDCQTDSRWIPGAHSSVNFWTDNWLGYVIADRIGIPHEFRANFRNP 852
            +  SSIW G+RP   D   +S+W+ G   S++FW  NWL   I D++GI H+   +    
Sbjct: 492  YKRSSIWPGMRPLFTDILYNSKWVVGNGHSIDFWHGNWLNGSIIDKLGIVHQLGKSLCGK 551

Query: 853  ISDFFFDNKWHLTMSFVEAYLDIVRDIVRCPI-APDSLDKRVWTRSVDGTVTSKSAYAFI 1029
            +SDF  +  W  + +       +  +I+   + + D  DK VW  S++G+++   AY F 
Sbjct: 552  VSDFILNGSWLCSTNLNAELAALWSEILAIQLPSYDIDDKLVWLDSLEGSLSLSIAYEFK 611

Query: 1030 RPSFPSVKWGSW 1065
                 SV W  W
Sbjct: 612  ISKQASVPWDRW 623



 Score = 81.6 bits (200), Expect(2) = 2e-44
 Identities = 49/162 (30%), Positives = 76/162 (46%)
 Frame = +3

Query: 1173 FAGALWDWIAGSFAVAFRNVYSFNDFMVHLMEFHFSAQIAFLWRVAIVSCIWLIWHIRND 1352
            F+  +W  I   F V   +    + F  + ++  F  Q+  LW   + +  + IW  RN 
Sbjct: 651  FSLRVWCAILSLFGVN-SHFLDIHAFFSYPLQHGFGTQLQLLWWGMMGAGFYSIWDARNS 709

Query: 1353 VIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPRIIPV 1532
            + F+ +H T D  +  +++ I E  S   G M N+  +L     L + GR  ++ +I  V
Sbjct: 710  IRFHERHSTPDCLIHSIKSQIREIDSWGLGTMHNSAGELCTFRALGIKGRASRSHQIREV 769

Query: 1533 PWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYRGFFRGCF 1658
             W  P    +KVN DG+A G PG     GIFR + G   GCF
Sbjct: 770  HWHAPSVFQVKVNTDGAARGTPGLAGFGGIFRDHLGNCMGCF 811


>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
          Length = 2215

 Score =  105 bits (262), Expect(3) = 2e-40
 Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            + K P+ +L+++ + + NF+W G    K     +W +   P  EGGL +R++     AF 
Sbjct: 1653 VLKPPVIVLERINRLLNNFLWGGSTASKRIHWASWGKIALPIAEGGLDIRNVEDVCEAFS 1712

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLP----SSIWAGLRPTVEDCQTDSRWI 744
            MK+ W+  T++S+    +R ++    G +     P    S  W  +       + + RW 
Sbjct: 1713 MKLWWRFRTTNSLWTQFMRAKYC--GGQLPTDVQPKLHDSQTWKRMVTISSITEQNIRWR 1770

Query: 745  PGAHSSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIV 924
             G H  + FW D W+G    + +   ++  A+    +SDFF +N W++         ++V
Sbjct: 1771 IG-HGELFFWHDCWMG---EEPLVNRNQAFASSMAQVSDFFLNNSWNVEKLKTVLQQEVV 1826

Query: 925  RDIVRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVV 1104
             +IV+ PI   S DK  WT + +G  ++KSA+  IR         ++IW   +P   +  
Sbjct: 1827 EEIVKIPIDTSSNDKAYWTTTPNGDFSTKSAWQLIRNRKVENPVFNFIWHKSVPLTTSFF 1886

Query: 1105 VWRAI 1119
            +WR +
Sbjct: 1887 LWRLL 1891



 Score = 59.3 bits (142), Expect(3) = 2e-40
 Identities = 36/109 (33%), Positives = 50/109 (45%)
 Frame = +3

Query: 51   SSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQ 230
            S + +ADD++I    +    + I   L  Y  LSGQ  NP KS V   T ++   R  I 
Sbjct: 1523 SHLAFADDVIIFANGSKSALQKIMAFLQEYEKLSGQRINPQKSCVVTHTNMASSRRQIIL 1582

Query: 231  TIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
               G S    P  YLG P++KG  K  +   L  KI  +   W+  +LS
Sbjct: 1583 QATGFSHRPLPITYLGAPLYKGHKKVMLFNDLVAKIEERITGWENKTLS 1631



 Score = 50.8 bits (120), Expect(3) = 2e-40
 Identities = 53/254 (20%), Positives = 97/254 (38%), Gaps = 6/254 (2%)
 Frame = +3

Query: 1176 AGALWDWIAGSFAVAFRNVYSFNDFMVHLMEFHFSAQIAFLWRVAIVSCIWLIWHIRNDV 1355
            A  +W + A  F +   N  + N  +         ++   +  +  +  +W +W  RND 
Sbjct: 1931 ANQVWSYFAKVFQIQIINPCTINQIICAWFYSGDYSKPGHIRTLVPLFTLWFLWVERNDA 1990

Query: 1356 IFNHKHWTTDAA---LVQLRAMIIESASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPRII 1526
               +     +     +++L   + +   L K   Q  ++ +     + +    P  P+++
Sbjct: 1991 KHRNLGMYPNRVVWKILKLLHQLFQGKQLQKWQWQGDKQ-IAQEWGIILKADAPSPPKLL 2049

Query: 1527 PVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYRGFFRGCFVEXXXXXXXXXXXXXX 1706
               W  P  G +K+N+DGS    P      G+ R + G     F E              
Sbjct: 2050 F--WLKPSIGELKLNVDGSCKHNPQSAAGGGLLRDHTGSMIFGFSENFGPQDSLQAELMA 2107

Query: 1707 XXXXY--AFRKGWTNIWLESDSTYVVGLLRS-QTGSIPWRLLNQWRYSLFLLSQMHVVVS 1877
                         + +W+E D+   V +++    GS   R L    +    LS +   +S
Sbjct: 2108 LHRGLLLCIEHNISRLWIEMDAKVAVQMIKEGHQGSSRTRYLLASIHRC--LSGISFRIS 2165

Query: 1878 HIYREGNRVADHLS 1919
            HI+REGN+ ADHLS
Sbjct: 2166 HIFREGNQAADHLS 2179


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score =  115 bits (287), Expect(2) = 1e-39
 Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
 Frame = +1

Query: 397 IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
           IY WP  LL QL+  ++NFIW+GDI       V+W   C P   GGL ++     N + I
Sbjct: 281 IYMWPRRLLHQLDSWIKNFIWSGDIYTHKVCTVSWKVMCRPWAAGGLDIKPTCLINESLI 340

Query: 577 MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLPSSIWAGLRPTVEDCQTDSRWIPGAH 756
           + + W+  T+DS     +  RFL     ++  FL SS+W G++  +    ++S WI G  
Sbjct: 341 LLLAWQFSTADSQWAALMHHRFLKHGTPLQHYFL-SSMWGGIKEHLSTISSNSIWIVGTG 399

Query: 757 SSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIVRDIV 936
           +++N WTDNWLG  + D + I       FR  ++D   +    L++      +  +   V
Sbjct: 400 ANINLWTDNWLGIRLVDSLNISPTLHTKFRASVADVIVNGA--LSLPAAALAVPDIASRV 457

Query: 937 RCPIAPDS--LDKRVWTRSVD 993
            C + P +   D  VW  S D
Sbjct: 458 ACLVLPTAPLPDALVWLHSSD 478



 Score = 77.4 bits (189), Expect(2) = 1e-39
 Identities = 43/120 (35%), Positives = 61/120 (50%)
 Frame = +3

Query: 18  PFMAPRNIVFPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGT 197
           P    R    P+ +LYADD++I CA T  N R +      Y+ +S Q+ N  KS+ + G 
Sbjct: 141 PMFYCRGASIPTHILYADDVLIFCAGTKQNIRCLLKFFNDYSEVSAQIINNNKSQFYAGA 200

Query: 198 RVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
             + +    I   +G S  + P  YLG PIFKG  K    + + D+I VKF  WK + LS
Sbjct: 201 MTTSH-SQMIAGTLGFSADNIPFFYLGCPIFKGKLKGIYFQSIVDRIKVKFAIWKCTLLS 259


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 364

 Score =  135 bits (341), Expect(2) = 2e-38
 Identities = 89/270 (32%), Positives = 126/270 (46%), Gaps = 8/270 (2%)
 Frame = +3

Query: 1173 FAGALWDWIAGSFAVAFRNVYSFNDFMVHLMEFHF---SAQIAFLWRVAIVSCIWLIWHI 1343
            FA +LW+  AG F +           +V L+ +     S Q+  +W +   + +W IW  
Sbjct: 94   FAASLWNNRAGLFELG-----CLPQNLVDLLYYGGVGRSHQLKEIWLICYTTTLWFIWKA 148

Query: 1344 RNDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQEDLLCLHRLKVSGRPPKAPRI 1523
            RN +  ++     DA    +   +  ++ L  GCM N+  +L  L +  +  RP +APRI
Sbjct: 149  RNKMRHDNCTIVVDAVRQLIMGHVKTASKLALGCMSNSLTELRVLKKFGLLCRPHRAPRI 208

Query: 1524 IPVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYRGFFRGCFVE--XXXXXXXXXXX 1697
              V W  PL GWIKVN DG+     G+    GIFR + G F G F               
Sbjct: 209  TEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLEILNSVDAEVM 268

Query: 1698 XXXXXXXYAFRKGWTNIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLFLLSQMHVVVS 1877
                    A+ + W +IWLE DS  V+  L+     +PWRL   W   L  +SQM+   S
Sbjct: 269  AVIQAIELAWVRDWEHIWLEVDSIIVLNFLQ-DPHLVPWRLRVGWGNFLHRISQMNFRSS 327

Query: 1878 HIYREGNRVADHLSKFTCDS---SWWDAPP 1958
            HI+REGN+VAD L+         SWWD PP
Sbjct: 328  HIFREGNQVADALANMGLSMSALSWWDEPP 357



 Score = 52.4 bits (124), Expect(2) = 2e-38
 Identities = 21/55 (38%), Positives = 33/55 (60%)
 Frame = +1

Query: 964  DKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVVVWRAIFGR 1128
            DK +W     G +++K A+ F+RP  PS+ WG  IWS +I  R ++  W+ + GR
Sbjct: 3    DKLIWVPLSSGELSAKEAFQFLRPRLPSLDWGKLIWSKFIIPRISLHSWKVLRGR 57


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 84.0 bits (206), Expect(2) = 3e-32
 Identities = 46/123 (37%), Positives = 63/123 (51%)
 Frame = +3

Query: 9   LLKPFMAPRNIVFPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVF 188
           L+    A RN   P    Y DD+++ C A   +   +      YA  SGQ+ N  KS +F
Sbjct: 410 LIDLIAASRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSFIF 469

Query: 189 FGTRVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGS 368
            G  ++    + I  I+G +VGS P  YLG PIFKG PK    +P+ DK+  K  +WK S
Sbjct: 470 AGG-ITDTRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKAS 528

Query: 369 SLS 377
            LS
Sbjct: 529 LLS 531



 Score = 84.0 bits (206), Expect(2) = 3e-32
 Identities = 36/73 (49%), Positives = 51/73 (69%)
 Frame = +1

Query: 391 MLIYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRA 570
           M IY WPI +LK++EK ++NFIW+GD+ ++  V V W + C+   EGGLGV+SLI  N A
Sbjct: 551 MSIYSWPIKILKEMEKWIKNFIWSGDVTKRKMVTVAWRKICADYEEGGLGVKSLICLNEA 610

Query: 571 FIMKMGWKLLTSD 609
             +K+ W L+ SD
Sbjct: 611 TNLKICWNLMQSD 623


>gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
          Length = 2249

 Score = 89.7 bits (221), Expect(3) = 2e-31
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            + K PI +L+++ +   +F+W G    K     +W +   P  EGGL +R+L     AF 
Sbjct: 1688 VLKPPICVLERVNRIFNSFLWGGSAASKKIHWASWAKISLPIKEGGLDIRNLAEVFEAFS 1747

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLP----SSIWAGLRPTVEDCQTDSRWI 744
            MK+ W+  T DS+    +R ++    G +     P    S  W  +       + + RW 
Sbjct: 1748 MKLWWRFRTIDSLWTRFMRMKYC--RGQLPMHTQPKLHDSQTWKRMVANSAITEQNMRWR 1805

Query: 745  PGAHSSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIV 924
             G    + FW D W+G      +   ++  +     + DFF +N W +         ++V
Sbjct: 1806 VG-QGKLFFWHDCWMG---ETPLTSSNQELSLSMVQVCDFFMNNSWDIEKLKTVLQQEVV 1861

Query: 925  RDIVRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVV 1104
             +I + PI   S D+  W  + +G  ++KSA+  IR         ++IW   +P   +  
Sbjct: 1862 DEIAKIPIDAMSKDEAYWAPTPNGEFSTKSAWQLIRKREVVNPVFNFIWHKTVPLTISFF 1921

Query: 1105 VWRAI 1119
            +WR +
Sbjct: 1922 LWRLL 1926



 Score = 48.9 bits (115), Expect(3) = 2e-31
 Identities = 34/109 (31%), Positives = 46/109 (42%)
 Frame = +3

Query: 51   SSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQ 230
            S + +ADD++I    +    + I   L  Y  +SGQ  N  KS     T VS   R  I 
Sbjct: 1558 SHLAFADDVLIFTNGSKSALQRILAFLQEYQEISGQRINVQKSCFVTHTNVSSSRRQIIA 1617

Query: 231  TIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
               G S       YLG P++KG  K  +   L  KI  +   W+   LS
Sbjct: 1618 QTTGFSHQLLLITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILS 1666



 Score = 46.6 bits (109), Expect(3) = 2e-31
 Identities = 61/263 (23%), Positives = 98/263 (37%), Gaps = 15/263 (5%)
 Frame = +3

Query: 1176 AGALWDWIAGSFAVAFRNVYSFNDFMVHLMEFHFSAQIAFLWRVAIVSCIWLIWHIRNDV 1355
            A  +W++ +  F +   N  + N  +          +   +  +  +  +W +W  RND 
Sbjct: 1966 ATQVWNYFSKFFQILVINPCTINQILGAWFYSGDYCKPGHIRTLVPIFTLWFLWVERNDA 2025

Query: 1356 IFNHKHWTTDAALVQLRAM-IIESASLD--------KGCMQNTQEDLLCLHRLKVSGRPP 1508
               H++       +  R + +I+  SL         KG  Q  QE  +      +   PP
Sbjct: 2026 --KHRNLGMYPNRIVWRILKLIQQLSLGQQLLKWQWKGDKQIAQEWGITFQAESLP--PP 2081

Query: 1509 KAPRIIPVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYRGFFRGCFVEXXXXXXXX 1688
            K       PW  P  G  K+N+DGSA          G+ R + G     F E        
Sbjct: 2082 KV-----FPWHKPSIGEFKLNVDGSA-KLSQNAAGGGVLRDHAGVMVFGFSENLGIQNSL 2135

Query: 1689 XXXXXXXXXXYAFRKGWT--NIWLESDSTYVVGLLRSQTGSIPWRLLNQWRYSLF----L 1850
                          + +    +W+E D+  V+ LL+        R  +  RY L     L
Sbjct: 2136 QAELLALYRGLILCRDYNIRRLWIEMDAASVIRLLQGNQ-----RGPHAIRYLLVSIRQL 2190

Query: 1851 LSQMHVVVSHIYREGNRVADHLS 1919
            LS     +SHI+REGN+ AD L+
Sbjct: 2191 LSHFSFRLSHIFREGNQAADFLA 2213


>gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
          Length = 3503

 Score =  105 bits (261), Expect(2) = 4e-31
 Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 4/245 (1%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            + K PI +L+++ +   NF+W G  + K     +W +   P  EGGL +R+L    +AF 
Sbjct: 2941 VLKPPIIVLERINRLFNNFLWGGSASSKRIHWASWGKIALPIAEGGLDIRNLEDVFKAFS 3000

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLP----SSIWAGLRPTVEDCQTDSRWI 744
            MK+ W+  T++S+    +R ++    G +     P    S  W  +       + + RW 
Sbjct: 3001 MKLWWRFRTTNSLWMQFMRAKYC--GGQLPTHVQPKLHDSQTWKRMVTISSITEQNIRWR 3058

Query: 745  PGAHSSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIV 924
             G H  + FW D W+G    + + I ++  A+    +SDFF +N W +         ++V
Sbjct: 3059 VG-HGKLFFWHDCWMG---EEPLVIRNQEFASSMAQVSDFFLNNSWDIEKLKSVLQQEVV 3114

Query: 925  RDIVRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVV 1104
             +I + PI   S D+  WT + +G  ++KSA+   R         ++IW   +P   +  
Sbjct: 3115 EEIAKIPINASSNDRAYWTPTPNGDFSTKSAWQLSRERKVVNPTYNYIWHKSVPLTTSFF 3174

Query: 1105 VWRAI 1119
            +WR +
Sbjct: 3175 LWRLL 3179



 Score = 58.9 bits (141), Expect(2) = 4e-31
 Identities = 37/109 (33%), Positives = 49/109 (44%)
 Frame = +3

Query: 51   SSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQ 230
            S + +ADD++I    +    + I   L  Y  LSGQ  NP KS V   T ++   R  I 
Sbjct: 2811 SHLAFADDVIIFANGSKSALQRILAFLQEYEELSGQRINPQKSCVVTHTNMASSRRQIIL 2870

Query: 231  TIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
               G S    P  YLG P+FKG  K  +   L  KI  +   W+   LS
Sbjct: 2871 QATGFSHRPLPITYLGAPLFKGHKKVILFNDLVAKIEERITGWENKILS 2919



 Score = 71.2 bits (173), Expect(2) = 5e-17
 Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            + K P+ +++++E+   +F+W    + K      W++   P +EGGL +R+L     AF 
Sbjct: 1147 VLKPPVTVIEKIERLFNSFLWGDSCDGKKLHWTAWSKITFPVSEGGLDIRNLRDVFEAFS 1206

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLP----SSIWAGLRPTVEDCQTDSRWI 744
            +K+ W+  T +S+    LR ++ +  G I     P    S +W  +    +    + RW 
Sbjct: 1207 LKLWWRFQTCNSLWTRFLRTKYCL--GRIPHLVQPKLHDSQVWKRMIVGRDVALQNIRWR 1264

Query: 745  PGAHSSVNFWTDNWLG-YVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYL-- 915
             G    + FW D W+G   +A      H    N  + +  F+  ++W +    + +YL  
Sbjct: 1265 IG-KGELFFWHDCWMGDQPLATLFPSFH----NDMSHVHKFYNGDEWDIVK--LNSYLPT 1317

Query: 916  DIVRDIVRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERR 1095
             +V +I++ P      D   W  + +G  +  SA+  IR         S+ W   IP   
Sbjct: 1318 SLVDEILQIPFDRSQEDVAYWALTSNGEFSFWSAWEIIRQRQTPNALLSFNWHRSIPLSI 1377

Query: 1096 TVVVWRAI 1119
            +  +WR +
Sbjct: 1378 SFFLWRVL 1385



 Score = 45.4 bits (106), Expect(2) = 5e-17
 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
 Frame = +3

Query: 18   PFMAPRNIV---FPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVF 188
            P +  RN++   +    L  DDIVI       + + I + L  Y  +SGQ  N  KS   
Sbjct: 1003 PSLINRNLMHKAYAKLNLQLDDIVIFTNGCRSSLQKILNFLQEYEQVSGQQVNHQKSCFI 1062

Query: 189  FGTRVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGS 368
                 +   R  I    G    + P  YLG P+ KG  K  +   L  KI  +   W+  
Sbjct: 1063 TTNGCALSRRQIISHTTGFHHKTLPVTYLGAPLHKGQKKVILFDSLISKIRDRISGWENK 1122

Query: 369  SLS 377
             LS
Sbjct: 1123 ILS 1125



 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 6/204 (2%)
 Frame = +3

Query: 1326 WLIWHIRNDVIFNHKHWTTDAALVQLRAMI--IESASLDKGCMQNTQEDLLCLHRLKVSG 1499
            W +W  RND    H     +  + ++  ++  + + SL K        D+  +   K   
Sbjct: 1475 WFLWLERNDAKHRHMGMYPNRVIWRIMKLLNQLHAGSLLKQWQWKGDTDIATMWGFKYPP 1534

Query: 1500 RPPKAPRIIPVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYRGFFRGCFVEXXXXX 1679
            +  ++P+II   W  P  G  K+N+DGS+  +       G+ R + G     F E     
Sbjct: 1535 KYCQSPQIIS--WIKPFIGEYKLNVDGSSKSSQNA-AGGGVLRDHTGKLAFAFSENLGPL 1591

Query: 1680 XXXXXXXXXXXXXYAFRK--GWTNIWLESDSTYVVGLLR-SQTGSIPWR-LLNQWRYSLF 1847
                             K    TN+W+E D+   V +++ SQ GS   R LL   R  L 
Sbjct: 1592 PSLQAELHALLRGLLLCKERNITNLWIEMDALVAVQMVQQSQKGSHDIRYLLESIRLCLR 1651

Query: 1848 LLSQMHVVVSHIYREGNRVADHLS 1919
              S     +SHIYREGN+ AD LS
Sbjct: 1652 SFSYR---ISHIYREGNQAADFLS 1672


>gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
          Length = 1368

 Score = 81.6 bits (200), Expect(3) = 8e-31
 Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 4/245 (1%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            + K P  +++++E+   +F+W   ++        W     P +EGGLG+RSL  +  AF 
Sbjct: 774  VLKPPACVIQKIERLFNSFLWGSSMDSTRIHWTAWHNITFPSSEGGLGIRSLKDSFDAFS 833

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLP----SSIWAGLRPTVEDCQTDSRWI 744
             K+ W+  T  S+    +R ++    G I  +  P    S+ W  L           RW 
Sbjct: 834  AKLWWRFDTCQSLWVRYMRLKYC--TGQIHHNIAPKPHDSATWKPLLAGRATASQQIRWR 891

Query: 745  PGAHSSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIV 924
             G    + FW D W+G    + +       +     ++ FF D+ W +          IV
Sbjct: 892  IG-KGDIFFWHDAWMG---DEPLVNSFPSFSQSMMKVNYFFNDDAWDVDKLKTFIPNAIV 947

Query: 925  RDIVRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVV 1104
             +I++ PI+ +  D   W  + +G  + KSA+  +R        G  IW   IP   +  
Sbjct: 948  EEILKIPISREKEDIAYWALTANGDFSIKSAWELLRQRKQVNLVGQLIWHKSIPLTVSFF 1007

Query: 1105 VWRAI 1119
            +WR +
Sbjct: 1008 LWRTL 1012



 Score = 52.4 bits (124), Expect(3) = 8e-31
 Identities = 33/109 (30%), Positives = 47/109 (43%)
 Frame = +3

Query: 51  SSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQ 230
           S + +ADDI+I    +      I + L  Y  +SGQ  N  KS       +    R  I 
Sbjct: 644 SHLAFADDIMIFTNGSKSVLEKILEFLQEYEQISGQRVNHQKSCFVTANNMPSSRRQIIS 703

Query: 231 TIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
             +G    + P  YLG P+FKG  K  +   L +KI  +   W+   LS
Sbjct: 704 QTIGFLHKTLPITYLGAPLFKGPKKVMLFDSLINKIRERITGWENKILS 752



 Score = 49.3 bits (116), Expect(3) = 8e-31
 Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 9/258 (3%)
 Frame = +3

Query: 1176 AGALWDWIAGSFAVAFRNVYSFNDFMVHLMEFHFSAQIA---FLWRVAIVSCIWLIWHIR 1346
            A  +W++ +  F +   N     + +  L  +++S        +  + ++   W +W  R
Sbjct: 1052 AQQVWNYFSKFFQIYVHNP---QNILQILNSWYYSGDFTKPGHIRTLILLFIFWFVWVER 1108

Query: 1347 NDVIFNHKHWTTDAALVQLRAMIIESASLDKGCMQNTQEDL-LCLH-RLKVSGRPPKAPR 1520
            ND          D  + ++  ++ +       C    + DL + +H     +      P+
Sbjct: 1109 NDAKHRDLGMYPDRIIWRIMKILRKLFQGGLLCKWQWKGDLDIAIHWGFNFAQERQARPK 1168

Query: 1521 IIPVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIFRTYRGFFRGCFVEXXXXXXXXXXXX 1700
            II   W  PL G +K+N+DGS+          G+ R + G     F E            
Sbjct: 1169 IIN--WIKPLIGELKLNVDGSSKDEFQNAAGGGVLRDHTGNLIFGFSENFGYQNSLQAEL 1226

Query: 1701 XXXXXXYAFRKGW--TNIWLESDSTYVVGLLRSQ-TGSIPWR-LLNQWRYSLFLLSQMHV 1868
                        +  + +W+E D+  V+ ++++   GS   + LL   R  L ++S   V
Sbjct: 1227 LALHRGLCLCMEYNVSRVWIEVDAQVVIQMIQNHHKGSYKIQYLLESIRKCLQVIS---V 1283

Query: 1869 VVSHIYREGNRVADHLSK 1922
             +SHI+REGN+ AD LSK
Sbjct: 1284 RISHIHREGNQAADFLSK 1301


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 98.6 bits (244), Expect(2) = 4e-30
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 11/254 (4%)
 Frame = +1

Query: 391  MLIYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRA 570
            M +   P++   +++K  RNF+W  D N +    VNW   C P+NEGGLG+R     NRA
Sbjct: 809  MQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRA 868

Query: 571  FIMKMGWKLLTS-DSIVFDTLRRRFLMDNGSIRRSFLPSSIWAGLRPTVEDCQTDS---R 738
            F+ KM W++ ++ D +    LR +++ +   +      +  W G R  ++     +   +
Sbjct: 869  FLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSW-GWRSIMKGKDVLAGAIK 927

Query: 739  WIPGAHSSVNFWTDNWLG----YVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVE 906
            W  G    +NFW D W+G        D I  PH       + I+      +W  T +   
Sbjct: 928  WNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLITS---QRRWD-TGALHN 983

Query: 907  AYLDIVRDIVRC-PIAPDS--LDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSP 1077
                 + D+VR  PIA +S   D   W  S  G VT  SAY+ I       +   WIW  
Sbjct: 984  ILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDWIWRA 1043

Query: 1078 YIPERRTVVVWRAI 1119
               E+  + +W+ +
Sbjct: 1044 TCTEKIKLFMWKIV 1057



 Score = 62.0 bits (149), Expect(2) = 4e-30
 Identities = 35/121 (28%), Positives = 59/121 (48%)
 Frame = +3

Query: 15   KPFMAPRNIVFPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFG 194
            KP    R     S + +ADD+++   A+   A+ +FD L  +++ SG   N  KS +F  
Sbjct: 669  KPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCS 728

Query: 195  TRVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSL 374
            + V+  ++  I +I+ + V      YLG+P+ K          + DK+  K   WK SSL
Sbjct: 729  SNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSL 788

Query: 375  S 377
            +
Sbjct: 789  N 789


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 98.6 bits (244), Expect(2) = 4e-30
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 11/254 (4%)
 Frame = +1

Query: 391  MLIYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRA 570
            M +   P++   +++K  RNF+W  D N +    VNW   C P+NEGGLG+R     NRA
Sbjct: 809  MQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRA 868

Query: 571  FIMKMGWKLLTS-DSIVFDTLRRRFLMDNGSIRRSFLPSSIWAGLRPTVEDCQTDS---R 738
            F+ KM W++ ++ D +    LR +++ +   +      +  W G R  ++     +   +
Sbjct: 869  FLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSW-GWRSIMKGKDVLAGAIK 927

Query: 739  WIPGAHSSVNFWTDNWLG----YVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVE 906
            W  G    +NFW D W+G        D I  PH       + I+      +W  T +   
Sbjct: 928  WNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLITS---QRRWD-TGALHN 983

Query: 907  AYLDIVRDIVRC-PIAPDS--LDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSP 1077
                 + D+VR  PIA +S   D   W  S  G VT  SAY+ I       +   WIW  
Sbjct: 984  ILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDWIWRA 1043

Query: 1078 YIPERRTVVVWRAI 1119
               E+  + +W+ +
Sbjct: 1044 TCTEKIKLFMWKIV 1057



 Score = 62.0 bits (149), Expect(2) = 4e-30
 Identities = 35/121 (28%), Positives = 59/121 (48%)
 Frame = +3

Query: 15   KPFMAPRNIVFPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFG 194
            KP    R     S + +ADD+++   A+   A+ +FD L  +++ SG   N  KS +F  
Sbjct: 669  KPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKVNFSKSLLFCS 728

Query: 195  TRVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSL 374
            + V+  ++  I +I+ + V      YLG+P+ K          + DK+  K   WK SSL
Sbjct: 729  SNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSL 788

Query: 375  S 377
            +
Sbjct: 789  N 789


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 97.4 bits (241), Expect(2) = 1e-29
 Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 10/253 (3%)
 Frame = +1

Query: 391  MLIYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRA 570
            M +   P++   +++K  RNF+W  D N +    VNW   C P+NEGGLG+R     NRA
Sbjct: 1341 MQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRA 1400

Query: 571  FIMKMGWKLLTS-DSIVFDTLRRRFLMDNGSIRRSFLPSSIWAGLRPTVEDCQTDS---R 738
            F+ KM W++ ++ D +    LR +++ +   +      +  W G R  ++     +   +
Sbjct: 1401 FLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSW-GWRSIMKGKDVLAGAIK 1459

Query: 739  WIPGAHSSVNFWTDNWLG----YVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVE 906
            W  G    +NFW D W+G        D I  PH       +  +      +W        
Sbjct: 1460 WNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLTTS---QRRWDTGALHNI 1516

Query: 907  AYLDIVRDIVRCPIAPDS--LDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPY 1080
              ++++  +   PIA +S   D   W  S  G VT  SAY+ I       +   WIW   
Sbjct: 1517 LPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSLIAGHDGDGRSHDWIWRAT 1576

Query: 1081 IPERRTVVVWRAI 1119
              E+  + +W+ +
Sbjct: 1577 CTEKIKLFMWKIV 1589



 Score = 61.6 bits (148), Expect(2) = 1e-29
 Identities = 35/121 (28%), Positives = 58/121 (47%)
 Frame = +3

Query: 15   KPFMAPRNIVFPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFG 194
            KP    R     S + +ADD+++   A+   A+ +FD L  ++  SG   N  KS +F  
Sbjct: 1201 KPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKVNFSKSLLFCS 1260

Query: 195  TRVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSL 374
            + V+  ++  I +I+ + V      YLG+P+ K          + DK+  K   WK SSL
Sbjct: 1261 SNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSL 1320

Query: 375  S 377
            +
Sbjct: 1321 N 1321


>ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306660 [Fragaria vesca
           subsp. vesca]
          Length = 330

 Score = 94.0 bits (232), Expect(2) = 8e-29
 Identities = 47/162 (29%), Positives = 75/162 (46%)
 Frame = +1

Query: 397 IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
           IY WP  +L+Q+   +RNFIWTG+++ +    V W +CC+P  EGGLGVR++++ N+AF+
Sbjct: 177 IYAWPKTVLQQVRNWIRNFIWTGNVSCRAYYPVAWKKCCAPLKEGGLGVRNIMALNQAFL 236

Query: 577 MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLPSSIWAGLRPTVEDCQTDSRWIPGAH 756
           +K  W  LT                                        ++ +  + G  
Sbjct: 237 LKKFWDFLT----------------------------------------KSTTAAVVGNG 256

Query: 757 SSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKW 882
            S++FW  NWL   I D++GI H+   +    + DF     W
Sbjct: 257 HSIDFWHGNWLNGSIIDKLGIAHQLGKSLCGKVFDFILKGSW 298



 Score = 62.4 bits (150), Expect(2) = 8e-29
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
 Frame = +3

Query: 102 GNARYIFDTLGH---YASLSGQVFNPVKSKVFFGTRVSHYIRHRIQTIMGLSVGSFPTNY 272
           G+ R + + +G    Y   SGQ  N  KS V+ G    H  R  I + +G+ +G FP  Y
Sbjct: 62  GDKRSLVNLMGFFEKYGLNSGQFVNKSKSHVYLGKSAVHR-RALIYSWLGVPMGKFPFMY 120

Query: 273 LGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
           LGVPIF G PK    + L D+I      WKG+SLS
Sbjct: 121 LGVPIFVGRPKRVYFQVLTDRIRNAMSNWKGNSLS 155


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 197

 Score =  132 bits (333), Expect = 4e-28
 Identities = 70/176 (39%), Positives = 97/176 (55%), Gaps = 5/176 (2%)
 Frame = +3

Query: 1446 MQNTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIF 1625
            M+NT  +L  LHR+ + GRP KAP+I+ V W +P    +K+N DG+A G+PG     GIF
Sbjct: 1    MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 1626 RTYRGFFRGCFVEXXXXXXXXXXXXXXXXXXY--AFRKGWTNIWLESDSTYVVGLLRSQT 1799
            R + G   GCF                       A ++GW ++W+ESDST V+  L S  
Sbjct: 61   RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQ 120

Query: 1800 GSIPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPP 1958
              +PWR   +W     +L+ M V VSHIYREGN +AD L+ F  D++   WWD+ P
Sbjct: 121  VDVPWRFTTEWFNCRTILTTMTVKVSHIYREGNSIADCLANFGADNAGVHWWDSCP 176


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 79.3 bits (194), Expect(2) = 8e-28
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = +1

Query: 397 IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
           IY WP  LLK+LE   RNFIW+GDI ++  V V W + C P+++GGLG+RSL   N A  
Sbjct: 459 IYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGGLGIRSLSQLNAAGN 518

Query: 577 MKMGWKLLTS 606
           +K+ W +L S
Sbjct: 519 LKLCWDMLHS 528



 Score = 73.6 bits (179), Expect(2) = 8e-28
 Identities = 44/122 (36%), Positives = 55/122 (45%)
 Frame = +3

Query: 12  LKPFMAPRNIVFPSSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFF 191
           LK     RN + PS +LYADDI+I C     +AR                          
Sbjct: 350 LKQMRGTRNCLVPSHILYADDIMIFCNGGISDARL------------------------- 384

Query: 192 GTRVSHYIRHRIQTIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSS 371
                     ++  ++G + GSFP NYLGVPIFKG PK   L+P+ DKI  K   WK S 
Sbjct: 385 ---------QQLINVIGFNKGSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKASI 435

Query: 372 LS 377
           LS
Sbjct: 436 LS 437


>gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
          Length = 2251

 Score =  101 bits (252), Expect(2) = 2e-27
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 4/245 (1%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            + K P+ +L+++ +   +F+W G    K     +W +   P  EGGL +RSL     AF 
Sbjct: 1690 VLKPPVCVLERVNRLFNSFLWGGSAASKRIHWASWAKIALPVTEGGLDIRSLAEVFEAFS 1749

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLP----SSIWAGLRPTVEDCQTDSRWI 744
            MK+ W+  T+DS+    +R ++    G +     P    S  W  +  +    +   RW 
Sbjct: 1750 MKLWWRFRTTDSLWTRFMRMKYC--RGQLPMQTQPKLHDSQTWKRMLTSSTITEQHMRWR 1807

Query: 745  PGAHSSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIV 924
             G   +V FW D W+G   A  I    EF ++    + DFF +N W++         ++V
Sbjct: 1808 VG-QGNVFFWHDCWMGE--APLISSNQEFTSSMVQ-VCDFFTNNSWNIEKLKTVLQQEVV 1863

Query: 925  RDIVRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVV 1104
             +I + PI   + D+  WT + +G  ++KSA+  IR         ++IW   +P   +  
Sbjct: 1864 DEIAKIPIDTMNKDEAYWTPTPNGDFSTKSAWQLIRKRKVVNPVFNFIWHKTVPLTTSFF 1923

Query: 1105 VWRAI 1119
            +WR +
Sbjct: 1924 LWRLL 1928



 Score = 50.1 bits (118), Expect(2) = 2e-27
 Identities = 32/109 (29%), Positives = 47/109 (43%)
 Frame = +3

Query: 51   SSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQ 230
            S + +ADD++I    +    + I   L  Y  +SGQ  N  KS     T + +  R  I 
Sbjct: 1560 SHLAFADDVLIFTNGSKSALQRILVFLQEYEEISGQRINAQKSCFVTHTNIPNSRRQIIA 1619

Query: 231  TIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
               G +    P  YLG P++KG  K  +   L  KI  +   W+   LS
Sbjct: 1620 QATGFNHQLLPITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILS 1668


>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
          Length = 1079

 Score = 85.1 bits (209), Expect(2) = 2e-27
 Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
 Frame = +1

Query: 409  PIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFIMKMG 588
            PI +L Q+EK +  F+W G   +      +W   C P +EGG   R L    +AF +K  
Sbjct: 602  PIGVLNQMEKMLNRFLWGGSSEKTKMHWASWESMCYPWDEGGASFRRLQDNCKAFTVKQW 661

Query: 589  WKLLTSDSIVFDTLRRRF-LMDNGSIRRSFLPSS-IWAGLRPTVEDCQTDSRWIPGAHSS 762
            W L T++S+  + L  ++ L  +  I+R +  +S  W  +            W  G   +
Sbjct: 662  WSLRTTNSLWKEFLMAKYCLRIHPVIKRWYSGNSHSWNAMYKIKSTVDQHILWKIG-RGN 720

Query: 763  VNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWH---LTMSFVEAYLDIVRDI 933
            V+ W DNW G+    +    H+ R      +S+ + + +WH     +      +D + D+
Sbjct: 721  VSIWQDNWTGFGALWQFF--HKDRKPREQKLSELYINGQWHWRGWDIFLPSIVIDHIHDM 778

Query: 934  -VRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWI----WSPYIPERRT 1098
             +   +A D  D+ +WT   +G  T  SA+  +R      K G+W+    W   +P +  
Sbjct: 779  QINLNLALD--DRPIWTPEQNGKFTVSSAWQMLRQK----KIGNWLDEKNWHKKVPLKMN 832

Query: 1099 VVVWRAI 1119
             ++WR +
Sbjct: 833  FMLWRVL 839



 Score = 66.6 bits (161), Expect(2) = 2e-27
 Identities = 30/107 (28%), Positives = 56/107 (52%)
 Frame = +3

Query: 57  MLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQTI 236
           + +A+D+++  +    +   + +TL +Y  +SGQ  N  KS V   ++ +   R R+Q I
Sbjct: 470 LAFANDVILFSSGCRRSLDLLMETLNNYERVSGQKINKSKSSVSLSSKENEQARQRVQEI 529

Query: 237 MGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
            G++  S P  YLG P+++G   + +   +  KI+ K   W+   LS
Sbjct: 530 TGMTYRSLPIKYLGCPLYEGRKDYALFSEMMSKILHKIGGWQNKFLS 576


>gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
          Length = 2367

 Score =  100 bits (250), Expect(2) = 7e-27
 Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 4/245 (1%)
 Frame = +1

Query: 397  IYKWPIALLKQLEKAMRNFIWTGDINQKGSVVVNWTRCCSPKNEGGLGVRSLISANRAFI 576
            + K P+ +L+++ +   +F+W G    K     +W +   P  EGGL +RSL     AF 
Sbjct: 1860 VLKPPVCVLERINRIFNSFLWGGSAASKKIHWTSWAKISLPVKEGGLDIRSLAEVFEAFS 1919

Query: 577  MKMGWKLLTSDSIVFDTLRRRFLMDNGSIRRSFLP----SSIWAGLRPTVEDCQTDSRWI 744
            MK+ W+  T+DS+    +R ++    G +     P    S  W  +  +    + + RW 
Sbjct: 1920 MKLWWRFRTTDSLWTRFMRMKYC--RGQLPMHTQPKLHDSQTWKRMVASSAITEQNMRWR 1977

Query: 745  PGAHSSVNFWTDNWLGYVIADRIGIPHEFRANFRNPISDFFFDNKWHLTMSFVEAYLDIV 924
             G   ++ FW D W+G      I   HEF  +    + DFF +N W +         ++V
Sbjct: 1978 VG-QGNLFFWHDCWMGE--TPLISSNHEFSLSMVQ-VCDFFMNNSWDIEKLKTVLQQEVV 2033

Query: 925  RDIVRCPIAPDSLDKRVWTRSVDGTVTSKSAYAFIRPSFPSVKWGSWIWSPYIPERRTVV 1104
             +I + PI   S D+  W  + +G  ++KSA+  IR         ++IW   IP   +  
Sbjct: 2034 DEIAKIPIDAMSKDEAYWAPTPNGEFSTKSAWQLIRKREVVNPVFNFIWHKAIPLTTSFF 2093

Query: 1105 VWRAI 1119
            +WR +
Sbjct: 2094 LWRLL 2098



 Score = 48.9 bits (115), Expect(2) = 7e-27
 Identities = 33/109 (30%), Positives = 46/109 (42%)
 Frame = +3

Query: 51   SSMLYADDIVILCAATSGNARYIFDTLGHYASLSGQVFNPVKSKVFFGTRVSHYIRHRIQ 230
            S + +ADD++I    +    + I   L  Y  +S Q  N  KS     T VS   R  I 
Sbjct: 1730 SHLAFADDVLIFTNGSKSALQRILAFLQEYEEISRQRINAQKSCFVTHTNVSSSRRQIIA 1789

Query: 231  TIMGLSVGSFPTNYLGVPIFKGAPKHGVLRPLFDKIMVKFKRWKGSSLS 377
               G +    P  YLG P++KG  K  +   L  KI  +   W+   LS
Sbjct: 1790 QTTGFNHQLLPITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILS 1838


>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 197

 Score =  126 bits (317), Expect = 3e-26
 Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 5/176 (2%)
 Frame = +3

Query: 1446 MQNTQEDLLCLHRLKVSGRPPKAPRIIPVPWFLPLPGWIKVNIDGSAIGAPGRITAAGIF 1625
            M+NT  +L  LHR+ + GRP K P+I+ V W +     +K+N DG+A G+PG     GIF
Sbjct: 1    MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 1626 RTYRGFFRGCFVEXXXXXXXXXXXXXXXXXXY--AFRKGWTNIWLESDSTYVVGLLRSQT 1799
            R + G    CF                       A ++GW ++W+ESDST V+  L S  
Sbjct: 61   RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQ 120

Query: 1800 GSIPWRLLNQWRYSLFLLSQMHVVVSHIYREGNRVADHLSKFTCDSS---WWDAPP 1958
              +PWR   +W     +L+ M V VSHIYREGNRVAD L+ F  D++   WWD+ P
Sbjct: 121  VDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFGADNAGVHWWDSYP 176