BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00002110
         (2385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   636   e-179
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   632   e-178
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   629   e-177
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   629   e-177
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   626   e-176
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              625   e-176
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     624   e-176
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        620   e-174
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   598   e-168
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   592   e-166
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   584   e-164
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   580   e-163
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   577   e-162
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   561   e-157
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   550   e-154
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   549   e-153
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   548   e-153
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   548   e-153
ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arab...   542   e-151
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      541   e-151

>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  636 bits (1640), Expect = e-179
 Identities = 359/615 (58%), Positives = 412/615 (66%), Gaps = 4/615 (0%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1926
            MS LLPQF   PD F +  K+Q   ++  SK+R SI+ RTQCI             T+L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 1925 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTM-LDLEKLPSLDAHPISIAENKPLAYVG 1749
             E+L+L  +E + NSV A+R              +   KLPS +A+P S+A ++P  Y G
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRPWTYTG 120

Query: 1748 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1569
            A GPP+E    AN   E  L S                           M+V ++     
Sbjct: 121  AVGPPAE----ANTKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLKDS 176

Query: 1568 DSTTTGILPEVDTSMVEKSQLAHLAERV---VVREPKVAEIGLGEINPASDPLAESDDVE 1398
            D+   G L E  T+  E   LA   E     V  E   +E+     +   D L +SDD+E
Sbjct: 177  DNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDLE 236

Query: 1397 PSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQD 1218
            PS EELE L++QL+  IAV+S RQT              AN+               VQD
Sbjct: 237  PSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASVQD 296

Query: 1217 VDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAA 1038
            VDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PTF+QWAA
Sbjct: 297  VDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAA 356

Query: 1037 AAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 858
            AAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGA
Sbjct: 357  AAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA 416

Query: 857  EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 678
            EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL +ENGR
Sbjct: 417  EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGR 476

Query: 677  LPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLI 498
             P+D EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N+ LKPS+V+ADP+AETSE++L 
Sbjct: 477  HPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEILT 536

Query: 497  KQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 318
            KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR
Sbjct: 537  KQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 596

Query: 317  KLKNKKRTKHLQQYV 273
            KLKNKKRTK LQQY+
Sbjct: 597  KLKNKKRTKFLQQYI 611


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  632 bits (1630), Expect = e-178
 Identities = 360/616 (58%), Positives = 414/616 (67%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1926
            MS LLPQF   PD F +  K+Q   ++  SK+R  I+ RTQCI             T+L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 1925 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYV 1752
             E+L+L  +E + NSV A+R            + D++KL  PS +A+P S+A ++P  Y 
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTT-VPDIQKLKLPSFEANPDSVAPDRPWTYT 119

Query: 1751 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTK 1572
            GA GPP+E    AN   E  L S                           M+V ++    
Sbjct: 120  GAVGPPAE----ANTKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLND 175

Query: 1571 PDSTTTGILPEVDTSMVEKSQLAHLAE--RV-VVREPKVAEIGLGEINPASDPLAESDDV 1401
             D+   G L E  T+  E   LA   E  RV V  E   +E+     +   + L +SDD+
Sbjct: 176  SDNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTDSDDL 235

Query: 1400 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1221
            EPS EELE L++QL+  IAV+S RQT              AN+               VQ
Sbjct: 236  EPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQ 295

Query: 1220 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1041
            DVDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PTF+QWA
Sbjct: 296  DVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWA 355

Query: 1040 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 861
            AAAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 356  AAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 415

Query: 860  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 681
            AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL +ENG
Sbjct: 416  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENG 475

Query: 680  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 501
            R P+D EVAEA GLSMKRL+AVMLTPKAPRSLDQKIG N+ LKPS+V+ADPEAETSE++L
Sbjct: 476  RHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEIL 535

Query: 500  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 321
             KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 536  TKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595

Query: 320  RKLKNKKRTKHLQQYV 273
            RKLKNKKRTK LQQY+
Sbjct: 596  RKLKNKKRTKFLQQYI 611


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  629 bits (1621), Expect = e-177
 Identities = 353/615 (57%), Positives = 411/615 (66%), Gaps = 3/615 (0%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKS---QSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXT 1935
            MSCLLPQFKC PDTF+++F++     H S + SK++  I FRT C+             T
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTT 83

Query: 1934 MLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAY 1755
            +L+ E+L+L                                 PSL+AH  ++A N+   Y
Sbjct: 84   VLDVEKLRL---------------------------------PSLEAHSNAVAANRQWTY 110

Query: 1754 VGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKST 1575
             GA GP +E NLG +   ETL TS                          A+MV+HH S 
Sbjct: 111  FGAVGPSTEENLGTSLATETL-TSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSA 169

Query: 1574 KPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEP 1395
            KP S    I    DT+    +QL       ++ +  + E    E      PL +S D+EP
Sbjct: 170  KPKSKPA-ISLSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEP 228

Query: 1394 SAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDV 1215
            + EEL+ LE Q+++SIAVRS+RQT              AN+               VQ+V
Sbjct: 229  THEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEV 288

Query: 1214 DYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAA 1035
            DY+DP                +EE  LS GIQ LLKLE L+E L+ERCGG PTF+QWAAA
Sbjct: 289  DYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAA 348

Query: 1034 AGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 855
            AGVD R LR+++NYGILCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE
Sbjct: 349  AGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 408

Query: 854  KFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRL 675
            KFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 
Sbjct: 409  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 468

Query: 674  PDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIK 495
            P++EEVAEATGLSMKRL AV+LTPKAPRSLDQK GINQ+LKPS+VIADPEAET+EDLLIK
Sbjct: 469  PNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIK 528

Query: 494  QFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRK 315
            +FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIES AFRK
Sbjct: 529  KFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 588

Query: 314  LKNKKRTKHLQQYVM 270
            LKNKKRTKHL QY +
Sbjct: 589  LKNKKRTKHLMQYAI 603


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  629 bits (1621), Expect = e-177
 Identities = 345/612 (56%), Positives = 406/612 (66%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1926
            MSCLLPQFKC PDTF+ + K   H    S KNR +I FR QC               +L+
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKL--HILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLD 58

Query: 1925 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1746
             E+L+L                                 PSL++H  S+A ++P  Y+G 
Sbjct: 59   IEKLRL---------------------------------PSLESHSNSVAAHRPWTYIGV 85

Query: 1745 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1566
             GPP+E N  A   +ETLLTS                          A +V  + S K +
Sbjct: 86   VGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSE 145

Query: 1565 STTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAE 1386
            +     L   DTS   + Q        ++ +   AE G+ + N   D   +SDD+EP+ E
Sbjct: 146  TKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLE 205

Query: 1385 ELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYN 1206
            ELE LEA+ +KSI VRS RQ               A +               +Q+VDY+
Sbjct: 206  ELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYS 265

Query: 1205 DPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGV 1026
            DP                +EE  LSEGIQ LLKLE+LQE+L ER G  PTF+QWAAAAGV
Sbjct: 266  DPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGV 325

Query: 1025 DLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 846
            D +TLR++ NYGI CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRGAEKFD
Sbjct: 326  DQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFD 385

Query: 845  ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD 666
            A+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR P++
Sbjct: 386  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNN 445

Query: 665  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFM 486
            EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VIADP+AET+E+LLIKQFM
Sbjct: 446  EEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFM 505

Query: 485  KQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 306
            ++DL KVL+SLNPREKQV++WR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLKN
Sbjct: 506  REDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKN 565

Query: 305  KKRTKHLQQYVM 270
            K+RTKHLQQY++
Sbjct: 566  KRRTKHLQQYLV 577


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  626 bits (1615), Expect = e-176
 Identities = 352/615 (57%), Positives = 410/615 (66%), Gaps = 3/615 (0%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKS---QSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXT 1935
            MSCLLPQFKC PDTF+++F++     H S + SK++  I FRT C+             T
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTT 83

Query: 1934 MLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAY 1755
            +L+ E+L+L                                 PSL+AH  ++A N+   Y
Sbjct: 84   VLDVEKLRL---------------------------------PSLEAHSNAVAANRQWTY 110

Query: 1754 VGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKST 1575
             GA GP +E NLG +   ETL TS                          A+MV+HH S 
Sbjct: 111  FGAVGPSTEENLGTSLATETL-TSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSA 169

Query: 1574 KPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEP 1395
            KP S    I    DTS    +QL       ++ +  + E    E      PL +S D+EP
Sbjct: 170  KPKSKPA-ISLSADTSTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEP 228

Query: 1394 SAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDV 1215
            + EEL+ LE Q+++SIAVRS+RQT              AN+               VQ+V
Sbjct: 229  THEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEV 288

Query: 1214 DYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAA 1035
            DY+DP                +EE  LS GIQ LLKLE L+E L+ERCGG PTF+QWAAA
Sbjct: 289  DYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAA 348

Query: 1034 AGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 855
            AGVD R LR+++NYGILCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE
Sbjct: 349  AGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 408

Query: 854  KFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRL 675
            KFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 
Sbjct: 409  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 468

Query: 674  PDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIK 495
            P++EEVA+ATGLSMKRL AV+L PKAPRSLDQK GINQ+LKPS+VIADPEAET+EDLLIK
Sbjct: 469  PNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIK 528

Query: 494  QFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRK 315
            +FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIES AFRK
Sbjct: 529  KFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 588

Query: 314  LKNKKRTKHLQQYVM 270
            LKNKKRTKHL QY +
Sbjct: 589  LKNKKRTKHLMQYAI 603


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  625 bits (1611), Expect = e-176
 Identities = 344/612 (56%), Positives = 405/612 (66%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1926
            MSCLLPQFKC PDTF+ + K         SKNR +I FR QC               +L+
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHI-----LSKNREAIYFRVQCALSTTSPPLSTSTTAVLD 55

Query: 1925 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1746
             E+L+L                                 PSL++H  S+A ++P  Y+G 
Sbjct: 56   IEKLRL---------------------------------PSLESHSNSVAAHRPWTYIGV 82

Query: 1745 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1566
             GPP+E N  A   +ETLLTS                          A +V  + S K +
Sbjct: 83   VGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSE 142

Query: 1565 STTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAE 1386
            +     L   DTS   + Q        ++ +   AE G+ + N   D   +SDD+EP+ E
Sbjct: 143  TKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLE 202

Query: 1385 ELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYN 1206
            ELE LEA+ +KSI VRS RQ               A +               +Q+VDY+
Sbjct: 203  ELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYS 262

Query: 1205 DPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGV 1026
            DP                +EE  LSEGIQ LLKLE+LQE+L ER G  PTF+QWAAAAGV
Sbjct: 263  DPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGV 322

Query: 1025 DLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 846
            D +TLR++ NYGI CKDKMIKSNIRLVISIAKNYQGAGMN+QDLVQEGCRGLVRGAEKFD
Sbjct: 323  DQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFD 382

Query: 845  ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD 666
            A+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR P++
Sbjct: 383  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNN 442

Query: 665  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFM 486
            EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VIADP+AET+E+LLIKQFM
Sbjct: 443  EEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFM 502

Query: 485  KQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 306
            ++DL KVL+SLNPREKQV++WR+GLEDGR KTLQEIGELMGVSRERIRQIESCAFRKLKN
Sbjct: 503  REDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKN 562

Query: 305  KKRTKHLQQYVM 270
            K+RTKHLQQY++
Sbjct: 563  KRRTKHLQQYLV 574


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  624 bits (1610), Expect = e-176
 Identities = 352/615 (57%), Positives = 411/615 (66%), Gaps = 3/615 (0%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHA--SVNSSKNRV-SINFRTQCIXXXXXXXXXXXXXT 1935
            MSCLLPQF C PDTF+  F  ++H+  + NS   +   IN   QC+              
Sbjct: 1    MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARDINSLAQCVLSTTSPSTSVGATY 60

Query: 1934 MLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAY 1755
            +L  E+L+                                  PSLDA+  S+  N+P  Y
Sbjct: 61   VLSVEKLRF---------------------------------PSLDANSESVTSNRPWTY 87

Query: 1754 VGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKST 1575
             GA GPP E N  A    ETLLTS                          A++V    ST
Sbjct: 88   TGATGPPVEANFEATLATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDAALLV--RPST 145

Query: 1574 KPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEP 1395
            + +S +      + +S     + A  A RV  R+   AE+ L E +P  D   ES+D++P
Sbjct: 146  RAESIS------LVSSEARNIKTAQAASRV--RDSLRAEMALIEDHPPKDAAKESNDLQP 197

Query: 1394 SAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDV 1215
            + EEL  L+ QL+KSIAVRS+RQ+              AN+               VQDV
Sbjct: 198  TNEELRILQEQLSKSIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQDV 257

Query: 1214 DYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAA 1035
            D++DP                +EE  LSEGIQ LLKLE+LQEEL ERCGGPPTF+QWAAA
Sbjct: 258  DHSDPLRYLRSTTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAA 317

Query: 1034 AGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 855
            AGVD +TLR++INYGILCKDKMIKSN+RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE
Sbjct: 318  AGVDQKTLRRRINYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 377

Query: 854  KFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRL 675
            KFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 
Sbjct: 378  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQ 437

Query: 674  PDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIK 495
            P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIGINQ+LKPS++IADP+AET ED+L +
Sbjct: 438  PNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDAETLEDVLTR 497

Query: 494  QFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRK 315
            QFMKQDL KVLDSLN REKQV++WRFG++DGRMKTLQEIGELMGVSRERIRQIESCAFRK
Sbjct: 498  QFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIRQIESCAFRK 557

Query: 314  LKNKKRTKHLQQYVM 270
            LKNKKRTKHLQQY++
Sbjct: 558  LKNKKRTKHLQQYLI 572


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  620 bits (1598), Expect = e-174
 Identities = 353/627 (56%), Positives = 419/627 (66%), Gaps = 15/627 (2%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQ-SHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTML 1929
            MSCLLPQFKC PDTF++ F++  SH  + +    V      QC                +
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIFV 60

Query: 1928 EFEELK---LSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKP 1764
               + K       + + ++  +              +LD+EKL  PS +AHP S+A ++P
Sbjct: 61   VLAKHKEHICFRTQCVLSTTSSSTSTTATA------VLDVEKLRLPSFEAHPNSVAVDRP 114

Query: 1763 LAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHH 1584
              Y+GA GPPSE +LGA    + LLTS                          A+M  ++
Sbjct: 115  WTYIGATGPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENY 174

Query: 1583 KSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV-VVREPKVAEIGLGEINPASDPLAESD 1407
               K +  + G+    D S   K  L   AER  ++ +    E  + E +   +   ESD
Sbjct: 175  NYAKTEMKS-GVSFATD-SFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESD 232

Query: 1406 DVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXX 1227
            ++EP+ EELE LE QL++SIAVRS+RQT              AN+               
Sbjct: 233  ELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGA 292

Query: 1226 VQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQ 1047
            +QDVDY+DP                +EE  LSEGIQ LLKLERLQEEL ERCGG PTF+Q
Sbjct: 293  LQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQ 352

Query: 1046 WAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 867
            WAAAAGVD +TLR ++NYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV
Sbjct: 353  WAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 412

Query: 866  RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 687
            RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE
Sbjct: 413  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 472

Query: 686  NGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPS--------DVIAD 531
            NGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS        +VIAD
Sbjct: 473  NGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIAD 532

Query: 530  PEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRE 351
            PEAET+ED+LIKQFM++DL KVLDSL+ RE+QV++WRFG+EDGRMKTLQEIGELMGVSRE
Sbjct: 533  PEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRE 592

Query: 350  RIRQIESCAFRKLKNKKRTKHLQQYVM 270
            RIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 593  RIRQIESCAFRKLKNKKRTKHLQQYLL 619


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  598 bits (1542), Expect = e-168
 Identities = 329/522 (63%), Positives = 376/522 (72%), Gaps = 2/522 (0%)
 Frame = -2

Query: 1829 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1656
            +LD+EKL  PSL+AH  ++A N+   Y GA GP +E NLG +   ETL TS         
Sbjct: 4    VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 62

Query: 1655 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1476
                             A+MV+HH S KP S    I    DT+    +QL       ++ 
Sbjct: 63   AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTNTSMWAQLTERERASIIG 121

Query: 1475 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1296
            +  + E    E      PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT         
Sbjct: 122  DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 181

Query: 1295 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1116
                 AN+               VQ+VDY+DP                +EE  LS GIQ 
Sbjct: 182  AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 241

Query: 1115 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 936
            LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 242  LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 301

Query: 935  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 756
            AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 302  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 361

Query: 755  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 576
            RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+LTPKAPRSLDQK
Sbjct: 362  RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQK 421

Query: 575  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 396
             GINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 422  FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 481

Query: 395  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 270
            KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 482  KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  592 bits (1527), Expect = e-166
 Identities = 323/524 (61%), Positives = 378/524 (72%), Gaps = 4/524 (0%)
 Frame = -2

Query: 1829 MLDLEK--LPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1656
            +LD+E+  LPSL  +  S+  N+P  Y GA GPP+E N GA    ETLLTS         
Sbjct: 95   LLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAALATETLLTSEEAVIAAAA 154

Query: 1655 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1476
                             A++VS++   K ++++        TS    +   HL     +R
Sbjct: 155  AEAVTLAKAALKVAKDVALLVSNNHYAKVENSSP---VSCGTSAFHINWAQHLETEPTLR 211

Query: 1475 --EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXX 1302
              +   +E  L E +     + ES++VEP+ EE E L+ QL+  IA RS RQT       
Sbjct: 212  IGDSMASETALVEDHFLQIAINESENVEPANEEFELLQEQLSNGIAARSSRQTERKARRT 271

Query: 1301 XXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGI 1122
                   A+I               +QDVD++DP                +EE  LSEGI
Sbjct: 272  RAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGI 331

Query: 1121 QVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVI 942
            Q LLKLE+LQE+L +RCG  PTF+QWAAAAGVD +TLRK++NYGI+CKDKMIKSNIRLVI
Sbjct: 332  QELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGIMCKDKMIKSNIRLVI 391

Query: 941  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR 762
            SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 392  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 451

Query: 761  TIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLD 582
            TIRLPFHMVEATYRV+EA+KQLYS NGR P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+
Sbjct: 452  TIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLE 511

Query: 581  QKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDG 402
            QKIGINQ+LKPSDVIADP+AET+EDLL+K+FMKQDL KVLDSLNPREKQV++WRFG+EDG
Sbjct: 512  QKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 571

Query: 401  RMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 270
            RMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 572  RMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 615


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  584 bits (1505), Expect = e-164
 Identities = 341/620 (55%), Positives = 399/620 (64%), Gaps = 8/620 (1%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHASVN---SSKNRVSINFRTQCIXXXXXXXXXXXXXT 1935
            MSCLLPQFKC PDTF+++F++      N   S+K+R  I +R QCI              
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTS--------- 52

Query: 1934 MLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPL 1761
                           P++  A              +LDLEKL  PS +A   SIA N P 
Sbjct: 53   ---------------PSTSTA--------------VLDLEKLRLPSFEAPSDSIAPNSPW 83

Query: 1760 AYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHK 1581
             Y            G+    ETL+TS                          A++V +  
Sbjct: 84   TYA---------TFGSTLATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNFP 134

Query: 1580 STKPDSTTTGILPEVDTSMVEKSQLAHLAERV---VVREPKVAEIGLGEINPASDPLAES 1410
            S + +S  T        S ++ S+     E     ++ +    E G  E +     + ES
Sbjct: 135  SAETESKLTS------PSTIDASRWPQFTETERARIIGDSVATETGPREESSMQSSIKES 188

Query: 1409 DDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXX 1230
            D +E + +ELE L+ QL++ IAVRS+RQT              +++              
Sbjct: 189  DYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRG 248

Query: 1229 XVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFS 1050
             +Q+VDY+DP                SEE  LS  IQ LLKLERLQEEL ER GG PTF+
Sbjct: 249  SLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFA 308

Query: 1049 QWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 870
            QWAAAAGVD RTLRK+IN+G +CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL
Sbjct: 309  QWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 368

Query: 869  VRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 690
            VRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS
Sbjct: 369  VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 428

Query: 689  ENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSE 510
            ENGR PDDEEVAEA GLSMKRLSAV+LTPKAPRSLDQKIG+N DLKPS+VIADPEAET+E
Sbjct: 429  ENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAE 488

Query: 509  DLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 330
            +LL+KQFMKQDL KVL++LNPRE QVV+WRFGLEDGRMKTLQEIGE+MGVSRERIRQIES
Sbjct: 489  ELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIES 548

Query: 329  CAFRKLKNKKRTKHLQQYVM 270
             AFRKLKNKKRTK L+QY++
Sbjct: 549  SAFRKLKNKKRTKQLKQYLL 568


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  580 bits (1496), Expect = e-163
 Identities = 339/626 (54%), Positives = 405/626 (64%), Gaps = 14/626 (2%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHASVNSS----------KNRVSINFRTQCIXXXXXXX 1956
            MSCLLPQFKC P+TF++ FK+ ++ S + S          K R   + RTQCI       
Sbjct: 1    MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAA--- 57

Query: 1955 XXXXXXTMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIA 1776
                            SP  +   +   D              +D  KLP  D +  S++
Sbjct: 58   ----------------SPPTSTGTATTLD--------------VDRLKLPPFDTNTDSVS 87

Query: 1775 ENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMM 1596
              +  +Y+GA     E +L +     TLLTS                          A++
Sbjct: 88   VERLRSYLGAV----ESSLAS-----TLLTSEEASIAAAAAEAVTLAKAAVKVARDAALL 138

Query: 1595 VSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPL- 1419
             ++  S++   T +   P+ D    + +Q        ++ EP    +G+ +     D L 
Sbjct: 139  ANNINSSRA-GTKSQSSPKPDALHFKWAQFMESERADIIGEP----VGVNKRPMEGDALE 193

Query: 1418 ---AESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXX 1248
                ESDD+EP++EELE L+ +L++SI V+SKRQT               ++        
Sbjct: 194  PSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSS 253

Query: 1247 XXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCG 1068
                   VQ+VDY+DP                +EE  LSEGIQ LLKLERLQEEL ER G
Sbjct: 254  SRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYG 313

Query: 1067 GPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 888
              PTF+QWAAAAGV+ RTLRK++NYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ
Sbjct: 314  NEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ 373

Query: 887  EGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA 708
            EGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEA
Sbjct: 374  EGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEA 433

Query: 707  RKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADP 528
            RKQL  ENGR PDD+E+AEA GLSMKRL+AV++TPKAPRSL+QKIGINQ+LKPS+VI+DP
Sbjct: 434  RKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP 493

Query: 527  EAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRER 348
            EAET ED+LIKQFMKQDL KVLDSLNPREKQV++WRFG+EDGRMKTLQEIGE+MGVSRER
Sbjct: 494  EAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRER 553

Query: 347  IRQIESCAFRKLKNKKRTKHLQQYVM 270
            IRQIESCAFRKLKNKKRTKHLQQYVM
Sbjct: 554  IRQIESCAFRKLKNKKRTKHLQQYVM 579


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  577 bits (1488), Expect = e-162
 Identities = 334/619 (53%), Positives = 395/619 (63%), Gaps = 7/619 (1%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1926
            MSCLLPQFKC PDTF+V+F++  H   N ++         QC+                 
Sbjct: 1    MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQ-------LPQCVLS--------------- 38

Query: 1925 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYV 1752
                  SP  A+                     LDLEKL  PSL+ H  SI+ N+P  Y+
Sbjct: 39   ----SASPSTAV---------------------LDLEKLRLPSLEPHSDSISANRPWTYI 73

Query: 1751 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHH---- 1584
            G  GP  +   G +   ETL+ +                          A M  ++    
Sbjct: 74   GGIGPQKKPPFGTSLAAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSFMK 133

Query: 1583 KSTK-PDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESD 1407
            K TK P ++TT     + + + EK +   + + V       AE  L E      P  E D
Sbjct: 134  KETKIPIASTTDSFSSMWSLLTEKERADIIGDSVS------AETRLREEYSVQYPTEEYD 187

Query: 1406 DVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXX 1227
             +EP+ EEL  L+ QL++ IAVRSKRQT              AN+               
Sbjct: 188  CLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVP 247

Query: 1226 VQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQ 1047
            +Q+VD +DP                +EE  LSEGIQ LLKLER++EEL ER GG P+F+Q
Sbjct: 248  LQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQ 307

Query: 1046 WAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 867
            WAAAAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLV
Sbjct: 308  WAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLV 367

Query: 866  RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 687
            RGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSD+SRTIRLPFHMV+ATYRVKEARKQLYSE
Sbjct: 368  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSE 427

Query: 686  NGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSED 507
            NGR PDD+EVAEA GLSMKRLSAV+LTPKAPRSLDQK+G N DLK S+V ADPEAET+ED
Sbjct: 428  NGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAED 487

Query: 506  LLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESC 327
            LL+K+FMK+DLAKVL SL+PRE QVV+WRFG+EDGRMKTLQEIGELMGVSRER+RQIE  
Sbjct: 488  LLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELS 547

Query: 326  AFRKLKNKKRTKHLQQYVM 270
            AFRKLKNK RTK L+QY++
Sbjct: 548  AFRKLKNKNRTKQLRQYMV 566


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  561 bits (1445), Expect = e-157
 Identities = 332/619 (53%), Positives = 388/619 (62%), Gaps = 8/619 (1%)
 Frame = -2

Query: 2102 SCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEF 1923
            SCLLPQFKC PD+F+++FK+    S +   N+ S+ F+ QC                   
Sbjct: 3    SCLLPQFKCQPDSFSIHFKTSYSLSKH---NKGSVFFQPQC------------------- 40

Query: 1922 EELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYVG 1749
                     A+  S P              +MLD+ KL  PS D    S   ++   Y G
Sbjct: 41   ---------AVSTSPPL-----------LTSMLDVAKLRLPSFDTDSDSRISDRQWTYTG 80

Query: 1748 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1569
              GP +E         ETLLTS                              + + +   
Sbjct: 81   TVGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATSFRNSYNTKVV 140

Query: 1568 DSTTTGILPEVDTSMVEKSQ---LAHLA--ERVVVREPKVAEIGLGEINPASDPLAESD- 1407
             S+      + D    EK +   L HLA  +  VV +   A        PA D   ES  
Sbjct: 141  VSSAADKRSKWD-QFTEKERAGILGHLAVSDTGVVSDKSTAPAPAPAPAPAPDCNNESSG 199

Query: 1406 DVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXX 1227
            D++   +E+E LE QL+ S AVRS RQT              +++               
Sbjct: 200  DLKSEKQEVELLEEQLSVSSAVRSTRQTERKARRAKGLEKTASSMQSVKTGSSSRKKRAP 259

Query: 1226 VQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQ 1047
             Q+VD+NDP                 EEQ LSEGIQ LLKLERLQ ELTERCG  PTF+Q
Sbjct: 260  SQEVDHNDPLRYLRMTTSSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTFAQ 319

Query: 1046 WAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 867
            WA+AAGVD ++LRK+INYG  CKD+MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV
Sbjct: 320  WASAAGVDQKSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLV 379

Query: 866  RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSE 687
            RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE
Sbjct: 380  RGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSE 439

Query: 686  NGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSED 507
             G+ P++EEVAEATGLSMKRL AV+L+PK PRSLDQKIGINQ+LKPS+VIADPEAETSED
Sbjct: 440  TGKQPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGINQNLKPSEVIADPEAETSED 499

Query: 506  LLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESC 327
            +LIKQFM+QDL KVLDSL+ REKQV++WRFG+EDGRMKTLQEIGE MGVSRER+RQIES 
Sbjct: 500  ILIKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESS 559

Query: 326  AFRKLKNKKRTKHLQQYVM 270
            AFRKLKNKKR+ HLQQY++
Sbjct: 560  AFRKLKNKKRSNHLQQYLV 578


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  550 bits (1418), Expect = e-154
 Identities = 309/522 (59%), Positives = 356/522 (68%), Gaps = 2/522 (0%)
 Frame = -2

Query: 1829 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1656
            +L+LEKL  PSL++H  SIA N+P  Y+G  GPP E   G +   ETL+ +         
Sbjct: 34   VLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDEAVIAAAA 93

Query: 1655 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1476
                             A M  ++ S   + T   I    D+       L       ++ 
Sbjct: 94   AEAVALARAAVKVAKDAAEMAKNYCSVNTE-TKIPIASTADSFSSMWCLLTGKERADIIG 152

Query: 1475 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1296
                AE GL E      P  ESD   P+ EEL  LE QL++SI VRSKRQT         
Sbjct: 153  VSFSAETGLREECSTQYPTEESDCFGPTHEELALLEKQLSESIVVRSKRQTQRKAKRARA 212

Query: 1295 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1116
                 AN                VQ+VD +DP                +EE  LSEGIQ 
Sbjct: 213  AEKAAANFVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLLSATEEVELSEGIQD 272

Query: 1115 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 936
            LLKLER++EEL ER GG PTF+QWAAAA VD  TLRK++NY ILCKDKMIKSNIRLVISI
Sbjct: 273  LLKLERIEEELKERFGGKPTFAQWAAAARVDQITLRKRLNYAILCKDKMIKSNIRLVISI 332

Query: 935  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 756
            AKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWI+QAVR+SLSDQSRTI
Sbjct: 333  AKNYQGAGMNLQDLVQEGCRGLVRGVEKFDASKGFKFSTYAHWWIRQAVRRSLSDQSRTI 392

Query: 755  RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 576
            RLPFHMV+ATYRVKEARKQ YSENGR PDD+EVAEATGLSMKRLSAV+LTPKAPRSLDQK
Sbjct: 393  RLPFHMVDATYRVKEARKQFYSENGRHPDDKEVAEATGLSMKRLSAVLLTPKAPRSLDQK 452

Query: 575  IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 396
            +G N DLK S+V ADPEAET+EDLL+K+FMK+DL +VL+SL+PRE QV++WRFG+EDGRM
Sbjct: 453  MGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLERVLESLSPRENQVIRWRFGMEDGRM 512

Query: 395  KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 270
            KTLQEIGELMGVSRERIRQIE  AFRKLKNK RTK L+QY++
Sbjct: 513  KTLQEIGELMGVSRERIRQIELSAFRKLKNKNRTKQLRQYLV 554


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  549 bits (1414), Expect = e-153
 Identities = 326/620 (52%), Positives = 388/620 (62%), Gaps = 8/620 (1%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVN-FKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTML 1929
            MSCLLP F C  DTF  + +   +H S    K R ++ F+ QC+                
Sbjct: 1    MSCLLPHFNCHLDTFRTHPYALPTHLS----KTRPNLCFQPQCV---------------- 40

Query: 1928 EFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVG 1749
                     L A   S                 +L LEK  +LDA       N    Y+ 
Sbjct: 41   ---------LSATSPST----------------LLSLEKKLALDAPS---DPNTSWPYIA 72

Query: 1748 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1569
            A  PP + N  +    E+LLT+                          A++V      KP
Sbjct: 73   AVSPPLQANFKSTLSAESLLTNEEAVIVAAASEALALAKAAAKVAKDAALLVKK----KP 128

Query: 1568 DSTTTGILPEVDTSMVEKSQ--LAHLAERVVVREPKVAEIGLG---EINPASD--PLAES 1410
             +       E  + +  KS   L    +++   E  VAE  +G   EI    D  P  E 
Sbjct: 129  PAEA-----EYKSHVSSKSDDLLLKWFKQMEEVEDGVAEESMGAGAEIMEGVDVSPSEEE 183

Query: 1409 DDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXX 1230
             D+EPS EELE L+ QL+ SIAVRS+RQT               N               
Sbjct: 184  SDLEPSHEELERLQEQLSDSIAVRSRRQTERKAKRVRATEKATTNFTSFKPGSSSRRKRV 243

Query: 1229 XVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFS 1050
             +Q+VDY+DP                +EE  LS GIQ LLKLE++QE+L ER G  PTF+
Sbjct: 244  SMQEVDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFA 303

Query: 1049 QWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 870
            QWAA AGVD +TLRK++NYGI CKDKMIKSNIRLVISIAKNYQG+GMNLQDLVQEGCRGL
Sbjct: 304  QWAAVAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGL 363

Query: 869  VRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 690
            V+GAEKFD TKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS
Sbjct: 364  VKGAEKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 423

Query: 689  ENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSE 510
            ENGR PDDEEVAEATGLSMKRL+AV++TPKAPRSL+QKIGINQ+LKPS+VI+DP+AET+E
Sbjct: 424  ENGRQPDDEEVAEATGLSMKRLNAVLMTPKAPRSLEQKIGINQNLKPSEVISDPDAETAE 483

Query: 509  DLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 330
            + L+KQFMK+DL + LDSLNPRE+QVV+WRFG++DGR KTLQEIGE++GVSRERIRQIES
Sbjct: 484  EQLLKQFMKKDLEEALDSLNPRERQVVRWRFGMDDGRTKTLQEIGEMLGVSRERIRQIES 543

Query: 329  CAFRKLKNKKRTKHLQQYVM 270
             AF+KLKNKKRT HLQQY++
Sbjct: 544  SAFKKLKNKKRTNHLQQYLV 563


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  548 bits (1413), Expect = e-153
 Identities = 283/384 (73%), Positives = 316/384 (82%)
 Frame = -2

Query: 1421 LAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXX 1242
            + ES+DVE + +E E L  QL++ I  RS RQ               A++          
Sbjct: 17   IKESEDVESTNQEFELLREQLSEGITARSSRQIERKARRAKAAEKAAASVVSVKSGSTSR 76

Query: 1241 XXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGP 1062
                 +QDVD++DP                +EE  LSEGIQ LLKLE+LQEEL +RCGG 
Sbjct: 77   KKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQ 136

Query: 1061 PTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEG 882
            PT +QWAAAAGVD +TLRK+INYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ+G
Sbjct: 137  PTIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQG 196

Query: 881  CRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARK 702
            CRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+K
Sbjct: 197  CRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKK 256

Query: 701  QLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEA 522
            QLYS NGR P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIGINQ+LKPS+VIADPEA
Sbjct: 257  QLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEA 316

Query: 521  ETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIR 342
            ET+ED+L+K+FMKQDL KVLDSLN REKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIR
Sbjct: 317  ETAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 376

Query: 341  QIESCAFRKLKNKKRTKHLQQYVM 270
            QIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 377  QIESCAFRKLKNKKRTKHLQQYVV 400


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  548 bits (1411), Expect = e-153
 Identities = 326/618 (52%), Positives = 385/618 (62%), Gaps = 7/618 (1%)
 Frame = -2

Query: 2102 SCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEF 1923
            SCLLPQFKC PD+F+++F++    S    +N+  + F+ QC                   
Sbjct: 3    SCLLPQFKCQPDSFSIHFRTSFSVS---KQNKGPVFFQPQCA------------------ 41

Query: 1922 EELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYVG 1749
              +  SP  A+  S                  LD+ KL  PS D    S   ++   Y G
Sbjct: 42   --VTTSP--ALLTST-----------------LDVAKLRLPSFDTDSDSRISDRQWTYTG 80

Query: 1748 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1569
              GP +E         ETLLTS                           +  + + +   
Sbjct: 81   TVGPSTEAKYLEALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATLFKNSNNTNLL 140

Query: 1568 DSTTTGILPEVDTSMVEKSQ---LAHLA--ERVVVREPKVAEIGLGEINPASDPLAESDD 1404
             S+T     + D    EK +   L HLA  +  +V +   A        PAS+  + +D 
Sbjct: 141  ISSTADKRSKWD-QFTEKERAGILGHLAVSDTGIVSDKSTA--------PASNKESSADL 191

Query: 1403 VEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXV 1224
            +    +E+E +E Q   S+AVRS RQT              + I                
Sbjct: 192  IS-EIQEVELVEEQPAASLAVRSTRQTERKARRAKGLEKSASAIPSVKTGSSPRKKRVVA 250

Query: 1223 QDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQW 1044
            Q+VD+NDP                 EE  LS GIQ LLKLERLQ ELTERCG  PTFSQW
Sbjct: 251  QEVDHNDPLRYLRVTTSSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGRQPTFSQW 310

Query: 1043 AAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 864
            A+AAGVD ++LRK+INYG  CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Sbjct: 311  ASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 370

Query: 863  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 684
            GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLY+E 
Sbjct: 371  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYTEK 430

Query: 683  GRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDL 504
            GR P++EEVAEATGLSMKRL AV+L+PK PRSLDQKIG+NQ+LKPS+VIADPEAETSED+
Sbjct: 431  GRHPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAETSEDI 490

Query: 503  LIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 324
            LIKQFM++DL KVLDSL  REKQV++WRFG+EDGRMKTLQEIGELMGVSRER+RQIES A
Sbjct: 491  LIKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERVRQIESSA 550

Query: 323  FRKLKNKKRTKHLQQYVM 270
            FRKLKNKKR+ HLQQY++
Sbjct: 551  FRKLKNKKRSNHLQQYLV 568


>ref|XP_002889701.1| hypothetical protein ARALYDRAFT_470915 [Arabidopsis lyrata subsp.
            lyrata] gi|297335543|gb|EFH65960.1| hypothetical protein
            ARALYDRAFT_470915 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  542 bits (1397), Expect = e-151
 Identities = 323/618 (52%), Positives = 383/618 (61%), Gaps = 7/618 (1%)
 Frame = -2

Query: 2102 SCLLPQFKCSPDTFAVNFKSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEF 1923
            SCLLPQFKC PD+F+++F++   A  +   N+ S+ F+ QC                   
Sbjct: 3    SCLLPQFKCPPDSFSIHFRTSFCARKH---NKGSVFFQPQCA------------------ 41

Query: 1922 EELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYVG 1749
                +S   A+  S                 MLD+ KL  PS D    S   ++   Y  
Sbjct: 42   ----VSTSPALLTS-----------------MLDVAKLRLPSFDTDSDSRISDRQWTYTR 80

Query: 1748 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1569
              GP +E         ETLLTS                           +  + + +   
Sbjct: 81   TDGPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALARAAVKVAKDATLFKNSNNTNLL 140

Query: 1568 DSTTTGILPEVDTSMVEKSQ---LAHLA--ERVVVREPKVAEIGLGEINPASDPLAESDD 1404
             S+T     + D    EK +   L HLA  +  +V +   A        PAS+  +  D 
Sbjct: 141  ISSTADKRSKWD-QFTEKERAGILGHLAVSDNGIVSDKITA--------PASNKESPGDL 191

Query: 1403 VEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXV 1224
                 EE+E LE Q + S+AVRS RQT              + I                
Sbjct: 192  ESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPSVKTGSNPRKKRLVA 251

Query: 1223 QDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQW 1044
            Q+VD+NDP                 EE  LS GIQ LLKLERLQ ELTERCG  PTF+QW
Sbjct: 252  QEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTERCGRQPTFAQW 311

Query: 1043 AAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 864
            A+AAGVD ++LRK+I++G LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR
Sbjct: 312  ASAAGVDQKSLRKRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 371

Query: 863  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 684
            GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE 
Sbjct: 372  GAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSET 431

Query: 683  GRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDL 504
            G+ P +EE+AEATGLSMKRL AV+L+PK PRSLDQKIG+NQ+LKPS+VIADPEA TSED+
Sbjct: 432  GKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPEAVTSEDI 491

Query: 503  LIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 324
            LIK+FM+QDL KVLDSL  REKQV++WRFG+EDGRMKTLQEIGE+MGVSRER+RQIES A
Sbjct: 492  LIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSA 551

Query: 323  FRKLKNKKRTKHLQQYVM 270
            FRKLKNKKR+ HLQQY++
Sbjct: 552  FRKLKNKKRSNHLQQYLV 569


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  541 bits (1395), Expect = e-151
 Identities = 315/616 (51%), Positives = 389/616 (63%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2105 MSCLLPQFKCSPDTFAVNF----KSQSHASVNSSKNRVSINFRTQCIXXXXXXXXXXXXX 1938
            M+CLLPQFKC PDTF+++      S S ++ +  +NR  + FR QC              
Sbjct: 1    MTCLLPQFKCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAET 60

Query: 1937 TMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLA 1758
            ++ + E+L+L  +E+  NS+ A                               A++    
Sbjct: 61   SIFDVEKLRLPYVESNSNSLSA------------------------------FAQS---T 87

Query: 1757 YVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKS 1578
            ++   G P+EV        + L+ +                          A+M  + + 
Sbjct: 88   FLSTLGSPAEVKFDTALTAKLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQP 147

Query: 1577 TKPDSTTTG-ILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDV 1401
            TKP S   G  L      ++E  Q+  +      R  + +E  L E     D ++E  D+
Sbjct: 148  TKPVSKLEGQSLHFSGAQLLENEQVGSM------RNFEGSENSLRE----GDTVSEPADM 197

Query: 1400 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1221
            EP+ EEL+ LE +L +SI VRS RQ               +N+               VQ
Sbjct: 198  EPTIEELQLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQ 257

Query: 1220 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1041
            +VDY+DP                SEE  LS GIQ LLKLE+L +EL  R G  P+F QWA
Sbjct: 258  EVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWA 317

Query: 1040 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 861
            AAAG+D RTLR+++N+G  CKDKMIKSN+RLVISIAKNYQG+GMNLQDLVQEGCRGLVRG
Sbjct: 318  AAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRG 377

Query: 860  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 681
            AEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL SENG
Sbjct: 378  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENG 437

Query: 680  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 501
            + P++EEVAEATGLSMKRL+AV++TPKAPRSLDQKIG N +LKPS+VIADPEAET+EDLL
Sbjct: 438  KQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLL 497

Query: 500  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 321
             KQFM+QDL KVLD+L+ REKQV++WRFGLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 498  TKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAF 557

Query: 320  RKLKNKKRTKHLQQYV 273
            RKL+NKK+T +LQQY+
Sbjct: 558  RKLQNKKKTINLQQYM 573