BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00002026
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37670.1| integrase [Populus trichocarpa]                         72   1e-10
gb|ABG37671.1| integrase [Populus trichocarpa]                         69   6e-10
gb|ABG37658.1| integrase [Populus trichocarpa]                         65   1e-08

>gb|ABG37670.1| integrase [Populus trichocarpa]
          Length = 649

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 59/142 (41%), Positives = 74/142 (52%), Gaps = 20/142 (14%)
 Frame = +3

Query: 33  KMDKRIPPTLKKRFYFLPKNKILKI*EARLEML*ILMHKGISKDIRWIIEAKVRLAGEFS 212
           KMD  +   LKK F  LP+N I KI  AR E L +LM+ GI +DIRW+IEAKVRL+G+ S
Sbjct: 481 KMDTTLEK-LKKNFPALPQNAITKIYCARCERLRLLMNHGIPEDIRWLIEAKVRLSGK-S 538

Query: 213 IFPTK--------------------CMSGLGKSSYLKNEGPKYCKFVTNVLDGLVTQGVK 332
            F  K                    C S LG  S  + +  ++ K      DGL     K
Sbjct: 539 TFAKKRRAKQLKVCHRCARWTCNATCRS-LGMISVNREDKIQFIK------DGL----SK 587

Query: 333 ESLDNIILIHDTHPCGFVHREI 398
            SLDN++L  +THP G VHR I
Sbjct: 588 GSLDNLLLTLETHPSGDVHRAI 609


>gb|ABG37671.1| integrase [Populus trichocarpa]
          Length = 1332

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 49/130 (37%), Positives = 63/130 (48%), Gaps = 26/130 (20%)
 Frame = +3

Query: 87   KNKILKI*EARLEML*ILMHKGISKDIRWIIEAKVRLAGEFSIFPTKCMSGLGKSSYLKN 266
            KN I KI  AR   L +LM+ GI +DIRW+IEAKV+L+G+ S      M G GKS++ K 
Sbjct: 1167 KNAITKIYRARCARLRLLMNHGIPEDIRWLIEAKVQLSGDSSNSFISYMPGTGKSTFAKK 1226

Query: 267  EGPKYCKF--------------------------VTNVLDGLVTQGVKESLDNIILIHDT 368
               K  K                           +  + DGL     K SLDN++L  +T
Sbjct: 1227 RRAKRLKVCHKCARWTCNATCRSLGMVSINREDKIQFIKDGL----SKGSLDNLLLTLET 1282

Query: 369  HPCGFVHREI 398
            HP G VHR I
Sbjct: 1283 HPSGDVHRAI 1292


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 46/104 (44%), Positives = 55/104 (52%)
 Frame = +3

Query: 87   KNKILKI*EARLEML*ILMHKGISKDIRWIIEAKVRLAGEFSIFPTKCMSGLGKSSYLKN 266
            KN I KI  AR   L +LM+ GI KDIRW+IEAKVRL+G  SI                N
Sbjct: 1020 KNAITKIYRARCARLRLLMNHGIPKDIRWLIEAKVRLSGMVSI----------------N 1063

Query: 267  EGPKYCKFVTNVLDGLVTQGVKESLDNIILIHDTHPCGFVHREI 398
               K    +  + DGL     K SLDN++L  +THP G VHR I
Sbjct: 1064 REDK----IQFIKDGL----SKGSLDNLLLTLETHPSGDVHRAI 1099