BLASTX nr result

ID: Rehmannia23_contig00001739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00001739
         (690 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH01084.1| putative ROX1 [Nicotiana tabacum]                       55   1e-08
dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum]                     52   3e-08
ref|XP_006361067.1| PREDICTED: homeobox protein 2-like [Solanum ...    57   5e-08
ref|XP_004232917.1| PREDICTED: uncharacterized protein LOC101261...    57   7e-06

>gb|ABH01084.1| putative ROX1 [Nicotiana tabacum]
          Length = 346

 Score = 54.7 bits (130), Expect(2) = 1e-08
 Identities = 32/53 (60%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = -3

Query: 688 NENG-YGLYGHSSGQLHPSAAATTTAESKQPLP--KYLPKNYNPVAYVTEPED 539
           NENG YGLYGH S         TT   S   LP  KYLPKNYNPV+YVT PED
Sbjct: 59  NENGAYGLYGHDS--------VTTNNPSVHNLPNSKYLPKNYNPVSYVTVPED 103



 Score = 31.2 bits (69), Expect(2) = 1e-08
 Identities = 12/52 (23%), Positives = 24/52 (46%)
 Frame = -2

Query: 491 SNPENDKNYYGSARNYYNTPQEESELSEYRNNHATTNDRNSYYINGGSSFNS 336
           +N  N + YY    +Y      + +     +N  + N +   Y NGG+++N+
Sbjct: 144 NNNNNQQQYYNGVSDYSTRSNNQQQQFYGGDNFYSNNQQKQQYYNGGNTYNN 195


>dbj|BAM28759.1| ROX1 homologue [Nicotiana tabacum]
          Length = 346

 Score = 52.4 bits (124), Expect(2) = 3e-08
 Identities = 32/57 (56%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
 Frame = -3

Query: 688 NENG-YGLYGHSSGQLHPSAAATTTAESKQP----LP--KYLPKNYNPVAYVTEPED 539
           NENG YGLYGH S          TT  +  P    LP  KYLPKNYNPV+YVT PED
Sbjct: 59  NENGAYGLYGHDS---------VTTPNTNNPTVHDLPNSKYLPKNYNPVSYVTVPED 106



 Score = 32.0 bits (71), Expect(2) = 3e-08
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -2

Query: 494 TSNPENDKNYYGSARNYYNTPQEESELSEYRN--NHATTNDRNSYYINGGSSFNSPTD 327
           T    N++ YY    +Y      + +  ++ +  N  + N +   Y NGG+S+N+  D
Sbjct: 140 TYGNNNNQQYYNGVSDYSTKRNNQQQQQQFYSGDNFYSNNQQQQQYYNGGNSYNNNND 197


>ref|XP_006361067.1| PREDICTED: homeobox protein 2-like [Solanum tuberosum]
          Length = 295

 Score = 57.4 bits (137), Expect(2) = 5e-08
 Identities = 30/55 (54%), Positives = 32/55 (58%)
 Frame = -3

Query: 688 NENGYGLYGHSSGQLHPSAAATTTAESKQPLPKYLPKNYNPVAYVTEPEDTGDVT 524
           NEN Y +YGH  GQL PS   T       P  KYLPKNYN VAYVT P+   D T
Sbjct: 67  NENAYDVYGHELGQLPPSTPTTNLI----PNNKYLPKNYNSVAYVTVPQYNTDET 117



 Score = 26.2 bits (56), Expect(2) = 5e-08
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = -2

Query: 494 TSNPENDKNYYGSARNYYNTPQEESELSEYRNNHATTNDRNSY---YINGG 351
           T N  N+  YY +   Y +  + ++      NN+   N  N+Y   Y NGG
Sbjct: 146 TYNNNNNNEYYINGNTYDHYYKSDNNDDNNNNNNQYYNSVNTYNDQYHNGG 196


>ref|XP_004232917.1| PREDICTED: uncharacterized protein LOC101261288 [Solanum
           lycopersicum]
          Length = 342

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = -3

Query: 688 NENG-YGLYGHSSGQLHPSAAATTTAESKQPLPKYLPKNYNPVAYVTEPEDTGDVTT 521
           NENG YGLYGH S  +   +  T T ++  P  KYLPKNYNPV+YVT  ED  +  T
Sbjct: 61  NENGAYGLYGHES--VSTPSTTTNTNDNNFPNSKYLPKNYNPVSYVTVAEDNTNENT 115


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