BLASTX nr result
ID: Rehmannia23_contig00001667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00001667
(566 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, I... 100 3e-19
ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I... 100 3e-19
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part... 99 1e-18
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp.... 99 1e-18
ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, ... 99 1e-18
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ... 97 2e-18
ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_... 97 2e-18
gb|ABK22384.1| unknown [Picea sitchensis] gi|116790944|gb|ABK257... 97 4e-18
gb|ABK21111.1| unknown [Picea sitchensis] 97 4e-18
gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theob... 96 6e-18
ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutr... 96 8e-18
ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutr... 96 8e-18
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I... 96 8e-18
ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE1... 96 8e-18
ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, I... 95 1e-17
ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, I... 94 2e-17
dbj|BAJ97697.1| predicted protein [Hordeum vulgare subsp. vulgare] 94 2e-17
ref|XP_002264322.1| PREDICTED: DNA-directed RNA polymerases I, I... 94 3e-17
ref|XP_001784402.1| predicted protein [Physcomitrella patens] gi... 94 3e-17
ref|XP_002973594.1| hypothetical protein SELMODRAFT_173570 [Sela... 93 4e-17
>ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Solanum lycopersicum]
Length = 52
Score = 100 bits (249), Expect = 3e-19
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 8 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Vitis vinifera]
gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4 [Vitis
vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
product [Vitis vinifera]
Length = 51
Score = 100 bits (249), Expect = 3e-19
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 7 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
gi|482553592|gb|EOA17785.1| hypothetical protein
CARUB_v10006178mg, partial [Capsella rubella]
Length = 68
Score = 98.6 bits (244), Expect = 1e-18
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+Y+CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 24 PVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 68
>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316495|gb|EFH46918.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 52
Score = 98.6 bits (244), Expect = 1e-18
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+Y+CGDCGQENTLKPGDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 8 PVTYVCGDCGQENTLKPGDVIQCRECGYRILYKKRTRRVVQYEAR 52
>ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
12-like [Glycine max] gi|356560019|ref|XP_003548293.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Glycine max]
gi|567912183|ref|XP_006448405.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|255630274|gb|ACU15492.1| unknown [Glycine max]
gi|557551016|gb|ESR61645.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|561025849|gb|ESW24534.1| hypothetical protein
PHAVU_004G138700g [Phaseolus vulgaris]
Length = 51
Score = 98.6 bits (244), Expect = 1e-18
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSYICGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 7 PVSYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
DNA-directed RNA polymerase I, II, and III polypeptide
isoform 2, partial [Zea mays]
Length = 100
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSY+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 56 PVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 100
>ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_001172391.1|
Os01g0530366 [Oryza sativa Japonica Group]
gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
sativa Japonica Group] gi|242048352|ref|XP_002461922.1|
hypothetical protein SORBIDRAFT_02g010660 [Sorghum
bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
protein SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|514726952|ref|XP_004956106.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Setaria italica] gi|195609858|gb|ACG26759.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195620974|gb|ACG32317.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195645780|gb|ACG42358.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195646246|gb|ACG42591.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|218188380|gb|EEC70807.1|
hypothetical protein OsI_02267 [Oryza sativa Indica
Group] gi|222618595|gb|EEE54727.1| hypothetical protein
OsJ_02072 [Oryza sativa Japonica Group]
gi|241925299|gb|EER98443.1| hypothetical protein
SORBIDRAFT_02g010660 [Sorghum bicolor]
gi|241940338|gb|EES13483.1| hypothetical protein
SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
Japonica Group] gi|255676033|dbj|BAH92949.1|
Os05g0151800 [Oryza sativa Japonica Group]
Length = 52
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSY+CGDCG ENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 8 PVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>gb|ABK22384.1| unknown [Picea sitchensis] gi|116790944|gb|ABK25799.1| unknown
[Picea sitchensis] gi|148909877|gb|ABR18025.1| unknown
[Picea sitchensis] gi|224284970|gb|ACN40214.1| unknown
[Picea sitchensis] gi|224286085|gb|ACN40753.1| unknown
[Picea sitchensis]
Length = 53
Score = 96.7 bits (239), Expect = 4e-18
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSYICGDCG EN+LKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 9 PVSYICGDCGAENSLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 53
>gb|ABK21111.1| unknown [Picea sitchensis]
Length = 53
Score = 96.7 bits (239), Expect = 4e-18
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSYICGDCG EN+LKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 9 PVSYICGDCGAENSLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 53
>gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theobroma cacao]
Length = 51
Score = 95.9 bits (237), Expect = 6e-18
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+YICGDCGQENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 7 PVTYICGDCGQENTLKHGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
gi|557106544|gb|ESQ46859.1| hypothetical protein
EUTSA_v10028022mg [Eutrema salsugineum]
Length = 51
Score = 95.5 bits (236), Expect = 8e-18
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 7 PVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131670|ref|XP_006392764.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131674|ref|XP_006392765.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089341|gb|ESQ30049.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089342|gb|ESQ30050.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089343|gb|ESQ30051.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
Length = 51
Score = 95.5 bits (236), Expect = 8e-18
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 7 PVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Cucumis sativus]
gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Cucumis sativus]
Length = 51
Score = 95.5 bits (236), Expect = 8e-18
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSYICGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 7 PVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR 51
>ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE12 [Arabidopsis
thaliana] gi|75171496|sp|Q9FLM8.1|NRPBC_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
12; AltName: Full=DNA-directed RNA Polymerase II subunit
K gi|9759147|dbj|BAB09703.1| unnamed protein product
[Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
unknown protein [Arabidopsis thaliana]
gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
polymerase II polypeptide K [Arabidopsis thaliana]
gi|332007242|gb|AED94625.1| DNA-directed RNA polymerase
NRPB12/NRPD12/NRPE12 [Arabidopsis thaliana]
Length = 51
Score = 95.5 bits (236), Expect = 8e-18
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+Y+CGDCGQENTLK GDVIQCRECGYRILYKKRTRR+VQYEAR
Sbjct: 7 PVTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Setaria italica]
Length = 52
Score = 94.7 bits (234), Expect = 1e-17
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSY+CGDCG ENTLKPGDVIQCR+CGYRILYKKRT RIVQYEAR
Sbjct: 8 PVSYLCGDCGSENTLKPGDVIQCRDCGYRILYKKRTHRIVQYEAR 52
>ref|XP_003563174.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Brachypodium distachyon]
gi|357145250|ref|XP_003573577.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Brachypodium distachyon]
Length = 52
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSY+CGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 8 PVSYLCGDCGAENTLKSGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>dbj|BAJ97697.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 52
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSY+CGDCG ENTLK GDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 8 PVSYLCGDCGAENTLKTGDVIQCRECGYRILYKKRTRRIVQYEAR 52
>ref|XP_002264322.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4 isoform 2 [Vitis vinifera]
gi|298204812|emb|CBI25645.3| unnamed protein product
[Vitis vinifera]
Length = 51
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PVSYICGDCGQENTLK GDVIQCRECGY ILYKKRTRRIVQYEAR
Sbjct: 7 PVSYICGDCGQENTLKLGDVIQCRECGYCILYKKRTRRIVQYEAR 51
>ref|XP_001784402.1| predicted protein [Physcomitrella patens]
gi|162664073|gb|EDQ50807.1| predicted protein
[Physcomitrella patens]
Length = 56
Score = 93.6 bits (231), Expect = 3e-17
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+Y+CGDCG +NTLKPGDVIQCRECGYRILYKKRTRRIVQ+EAR
Sbjct: 12 PVTYLCGDCGADNTLKPGDVIQCRECGYRILYKKRTRRIVQFEAR 56
>ref|XP_002973594.1| hypothetical protein SELMODRAFT_173570 [Selaginella moellendorffii]
gi|300158632|gb|EFJ25254.1| hypothetical protein
SELMODRAFT_173570 [Selaginella moellendorffii]
Length = 67
Score = 93.2 bits (230), Expect = 4e-17
Identities = 40/45 (88%), Positives = 44/45 (97%)
Frame = +1
Query: 1 PVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 135
PV+Y+CGDCG +N+LKPGDVIQCRECGYRILYKKRTRRIVQYEAR
Sbjct: 23 PVTYMCGDCGTDNSLKPGDVIQCRECGYRILYKKRTRRIVQYEAR 67