BLASTX nr result
ID: Rehmannia23_contig00001405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00001405
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein C... 128 9e-28
ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein C... 124 1e-26
ref|XP_004300703.1| PREDICTED: chlorophyll a-b binding protein C... 119 3e-25
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia... 119 5e-25
emb|CBI20065.3| unnamed protein product [Vitis vinifera] 117 2e-24
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C... 117 2e-24
gb|AFK41475.1| unknown [Lotus japonicus] 115 5e-24
gb|ESW31081.1| hypothetical protein PHAVU_002G207500g [Phaseolus... 113 2e-23
ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein C... 113 3e-23
gb|ACU23773.1| unknown [Glycine max] 113 3e-23
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr... 112 5e-23
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C... 110 1e-22
ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycin... 110 1e-22
gb|ACU15016.1| unknown [Glycine max] 110 1e-22
gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloropl... 108 6e-22
ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein C... 105 5e-21
gb|EMJ24688.1| hypothetical protein PRUPE_ppa010195mg [Prunus pe... 103 2e-20
ref|XP_006351797.1| PREDICTED: chlorophyll a-b binding protein C... 102 4e-20
ref|XP_002533515.1| chlorophyll A/B binding protein, putative [R... 102 7e-20
gb|EOX98842.1| Light harvesting complex photosystem II subunit 6... 100 3e-19
>ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum lycopersicum]
gi|115833|sp|P27524.1|CB4A_SOLLC RecName:
Full=Chlorophyll a-b binding protein CP24 10A,
chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
Precursor gi|170394|gb|AAA34143.1| a-binding protein
[Solanum lycopersicum]
Length = 256
Score = 128 bits (321), Expect = 9e-28
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAAKKSWIPAVKG 264
++TSAA++NGL S+FLTGGNKSQA L+AP+AAR GGA PKR V+AAAAKKSWIPAV+G
Sbjct: 2 ATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRG 61
Query: 265 GGNFIDPEWLNGSLPGDY 318
GGN +DPEWL+GSLPGDY
Sbjct: 62 GGNLVDPEWLDGSLPGDY 79
>ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 124 bits (312), Expect = 1e-26
Identities = 57/78 (73%), Positives = 68/78 (87%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAAKKSWIPAVKG 264
++TSAA++NGL S+FLTGG KSQA L+AP+AAR GGA PKR IVVAAA KKSW+P V+G
Sbjct: 2 ATTSAAVLNGLSSSFLTGGKKSQALLAAPLAARVGGAATPKRFIVVAAAPKKSWLPGVRG 61
Query: 265 GGNFIDPEWLNGSLPGDY 318
GGN +DPEWL+GSLPGDY
Sbjct: 62 GGNLVDPEWLDGSLPGDY 79
>ref|XP_004300703.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 257
Score = 119 bits (299), Expect = 3e-25
Identities = 58/79 (73%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAAR-GGGAVAPKRLIVVAAAAKKSWIPAVK 261
++T+ A++NGL S FL GG +SQ+ LSA AAR GG VAPKR +VVAAAAKKSWIPAVK
Sbjct: 2 AATTGAMLNGLNSTFLCGGKRSQSLLSAGAAARVGGSVVAPKRFVVVAAAAKKSWIPAVK 61
Query: 262 GGGNFIDPEWLNGSLPGDY 318
GGGNFIDPEWL+GSLPGDY
Sbjct: 62 GGGNFIDPEWLDGSLPGDY 80
>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
Length = 257
Score = 119 bits (297), Expect = 5e-25
Identities = 58/79 (73%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAA-KKSWIPAVK 261
++TSAA++NGL S+FLTGG SQA L AP+AAR GG PKR IV AAAA KKSWIPAVK
Sbjct: 2 ATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAVK 61
Query: 262 GGGNFIDPEWLNGSLPGDY 318
GGGN +DPEWL+GSLPGDY
Sbjct: 62 GGGNLLDPEWLDGSLPGDY 80
>emb|CBI20065.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 117 bits (293), Expect = 2e-24
Identities = 56/79 (70%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAV-APKRLIVVAAAAKKSWIPAVK 261
++TSAA++NGLGS FLTGG +SQ+ LSA +AA+ G AV AP+RLIVVAAA KKSW+P VK
Sbjct: 2 AATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVK 61
Query: 262 GGGNFIDPEWLNGSLPGDY 318
GGN +DPEWL+GSLPGDY
Sbjct: 62 AGGNLVDPEWLDGSLPGDY 80
>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Vitis vinifera] gi|147804704|emb|CAN71620.1|
hypothetical protein VITISV_015544 [Vitis vinifera]
Length = 257
Score = 117 bits (293), Expect = 2e-24
Identities = 56/79 (70%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAV-APKRLIVVAAAAKKSWIPAVK 261
++TSAA++NGLGS FLTGG +SQ+ LSA +AA+ G AV AP+RLIVVAAA KKSW+P VK
Sbjct: 2 AATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVK 61
Query: 262 GGGNFIDPEWLNGSLPGDY 318
GGN +DPEWL+GSLPGDY
Sbjct: 62 AGGNLVDPEWLDGSLPGDY 80
>gb|AFK41475.1| unknown [Lotus japonicus]
Length = 260
Score = 115 bits (289), Expect = 5e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = +1
Query: 82 ASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAA--KKSWIPA 255
A++TS A++NGLGS+FL GGN+SQ L++ A+ G AV+PKRLIV AAAA KKSWIPA
Sbjct: 3 AAATSGAVLNGLGSSFLCGGNRSQTLLASAAGAKAGAAVSPKRLIVAAAAAAPKKSWIPA 62
Query: 256 VKGGGNFIDPEWLNGSLPGDY 318
VKGGGN +DPEWL+GSLPGD+
Sbjct: 63 VKGGGNLVDPEWLDGSLPGDF 83
>gb|ESW31081.1| hypothetical protein PHAVU_002G207500g [Phaseolus vulgaris]
Length = 258
Score = 113 bits (283), Expect = 2e-23
Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIV-VAAAAKKSWIPA 255
MA +TS A++N GS FL GG +SQA L+A I A+ G AV PKRLIV VAAA KKSWIP+
Sbjct: 1 MAVATSGAVLNRFGSNFLCGGKRSQALLAAGIGAKVGAAVNPKRLIVAVAAAPKKSWIPS 60
Query: 256 VKGGGNFIDPEWLNGSLPGDY 318
VKGGGNFIDPEWL+GSLPGDY
Sbjct: 61 VKGGGNFIDPEWLDGSLPGDY 81
>ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like isoform 1 [Glycine max]
Length = 258
Score = 113 bits (282), Expect = 3e-23
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIV-VAAAAKKSWIPA 255
MA++TS+A++NG GS FL GG +S A L+A I + G +V+PKR+IV VAAA KKSWIPA
Sbjct: 1 MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPA 60
Query: 256 VKGGGNFIDPEWLNGSLPGDY 318
VKGGG+FIDPEWL+GSLPGDY
Sbjct: 61 VKGGGSFIDPEWLDGSLPGDY 81
>gb|ACU23773.1| unknown [Glycine max]
Length = 258
Score = 113 bits (282), Expect = 3e-23
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIV-VAAAAKKSWIPA 255
MA++TS+A++NG GS FL GG +S A L+A I + G +V+PKR+IV VAAA KKSWIPA
Sbjct: 1 MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPA 60
Query: 256 VKGGGNFIDPEWLNGSLPGDY 318
VKGGG+FIDPEWL+GSLPGDY
Sbjct: 61 VKGGGSFIDPEWLDGSLPGDY 81
>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
Length = 258
Score = 112 bits (280), Expect = 5e-23
Identities = 53/81 (65%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAA-KKSWIPA 255
MA++TS A++NGLGS+FL+GG++SQ L+ I + G AV+P+RLIVVAAAA KKSWIP
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPG 60
Query: 256 VKGGGNFIDPEWLNGSLPGDY 318
V+GGGN +DPEWL+GSLPGD+
Sbjct: 61 VRGGGNLVDPEWLDGSLPGDF 81
>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Glycine max]
Length = 261
Score = 110 bits (276), Expect = 1e-22
Identities = 54/84 (64%), Positives = 69/84 (82%), Gaps = 4/84 (4%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGA---VAPKRLIVVAAAA-KKSW 246
MA++TS A++NGLGS+FL+GGN+SQ L+ I + G A V+P+RLIVVAAAA KKSW
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSW 60
Query: 247 IPAVKGGGNFIDPEWLNGSLPGDY 318
+P V+GGGN +DPEWL+GSLPGDY
Sbjct: 61 LPGVRGGGNLVDPEWLDGSLPGDY 84
>ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycine max]
gi|255632410|gb|ACU16555.1| unknown [Glycine max]
Length = 259
Score = 110 bits (276), Expect = 1e-22
Identities = 54/83 (65%), Positives = 68/83 (81%), Gaps = 3/83 (3%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVA--PKRLIVVAAAA-KKSWI 249
MA++TS A++NGLGS+FL+GGN+SQ L+ I + G AV P+RLIVVAAAA KKSW+
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWL 60
Query: 250 PAVKGGGNFIDPEWLNGSLPGDY 318
P V+GGGN +DPEWL+GSLPGDY
Sbjct: 61 PGVRGGGNLVDPEWLDGSLPGDY 83
>gb|ACU15016.1| unknown [Glycine max]
Length = 247
Score = 110 bits (276), Expect = 1e-22
Identities = 54/84 (64%), Positives = 69/84 (82%), Gaps = 4/84 (4%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGA---VAPKRLIVVAAAA-KKSW 246
MA++TS A++NGLGS+FL+GGN+SQ L+ I + G A V+P+RLIVVAAAA KKSW
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSW 60
Query: 247 IPAVKGGGNFIDPEWLNGSLPGDY 318
+P V+GGGN +DPEWL+GSLPGDY
Sbjct: 61 LPGVRGGGNLVDPEWLDGSLPGDY 84
>gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloroplastic [Phaseolus
vulgaris] gi|561021646|gb|ESW20417.1| hypothetical
protein PHAVU_006G207300g [Phaseolus vulgaris]
Length = 258
Score = 108 bits (271), Expect = 6e-22
Identities = 51/81 (62%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAA-KKSWIPA 255
MA++TS A++NGLGS+FL+GG++SQ L+ I + G AV+P+RLIVVAAAA KKSW+P
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGSRSQTLLATAIGGKLGVAVSPRRLIVVAAAAPKKSWLPG 60
Query: 256 VKGGGNFIDPEWLNGSLPGDY 318
V+ GGN +DPEWL+GSLPGD+
Sbjct: 61 VRAGGNLVDPEWLDGSLPGDF 81
>ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cicer arietinum]
Length = 260
Score = 105 bits (263), Expect = 5e-21
Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 3/83 (3%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAAR--GGGAVAPKRLIVVAAAA-KKSWI 249
MA++TS A++NGLGS+FL GG +SQ L A G AV+P+RL+V AAAA KKSWI
Sbjct: 1 MAAATSGAVLNGLGSSFLCGGKRSQTLLLATAIGGKVGAAAVSPRRLVVAAAAAPKKSWI 60
Query: 250 PAVKGGGNFIDPEWLNGSLPGDY 318
P V+GGGNFIDPEWL+GSLPGD+
Sbjct: 61 PGVRGGGNFIDPEWLDGSLPGDF 83
>gb|EMJ24688.1| hypothetical protein PRUPE_ppa010195mg [Prunus persica]
Length = 259
Score = 103 bits (258), Expect = 2e-20
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAAR--GGGAVAPKRLIVVAAAA-KKSWIPA 255
++T+ A++NGL S FL GG +SQA LSA GGG APKR IVVAAAA KKSWIPA
Sbjct: 2 AATTGAVLNGLNSPFLCGGKRSQALLSAGFGTTRVGGGPAAPKRFIVVAAAAPKKSWIPA 61
Query: 256 VKGGGNFIDPEWLNGSLPGDY 318
VK NFIDPEWL+GSLPGDY
Sbjct: 62 VKASNNFIDPEWLDGSLPGDY 82
>ref|XP_006351797.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 102 bits (255), Expect = 4e-20
Identities = 50/82 (60%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAA--KKSWIP 252
M ++++AA++NGL S+FLTGG K+QA L AP+ AR PKR IV AAA KKSWIP
Sbjct: 1 MTTTSAAAVLNGLSSSFLTGGKKTQALLGAPVTAR---VATPKRFIVAAAAVAPKKSWIP 57
Query: 253 AVKGGGNFIDPEWLNGSLPGDY 318
VK GGN +DPEWL+GSLPGD+
Sbjct: 58 GVKAGGNLVDPEWLDGSLPGDF 79
>ref|XP_002533515.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526625|gb|EEF28871.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 256
Score = 102 bits (253), Expect = 7e-20
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = +1
Query: 79 MASSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAAKKSWIPAV 258
MA++TS A++NGLGS+FL G +S A LSA I A + A + +V+AA KKSWIPAV
Sbjct: 1 MAAATSGAVLNGLGSSFLRGPKRSHALLSA-IGANRTASGASTKFVVMAAQPKKSWIPAV 59
Query: 259 KGGGNFIDPEWLNGSLPGDY 318
KGGGNFIDPEWL+GSLPGDY
Sbjct: 60 KGGGNFIDPEWLDGSLPGDY 79
>gb|EOX98842.1| Light harvesting complex photosystem II subunit 6 [Theobroma cacao]
Length = 254
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 SSTSAALVNGLGSAFLTGGNKSQAFLSAPIAARGGGAVAPKRLIVVAAAA-KKSWIPAVK 261
++TS ++NGLGS FL GG +SQA L A +A G ++L+VVAAAA KKSWIP V+
Sbjct: 2 AATSGTVINGLGSPFLCGGKRSQALLGARVATPASGT---RKLVVVAAAAPKKSWIPGVR 58
Query: 262 GGGNFIDPEWLNGSLPGDY 318
GGGNFI+PEWL+GSLPGDY
Sbjct: 59 GGGNFINPEWLDGSLPGDY 77