BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00001228
         (2225 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         597   e-168
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   590   e-166
emb|CCH50976.1| T4.15 [Malus x robusta]                               512   e-142
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   506   e-140
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      486   e-134
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   475   e-131
emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcripta...   454   e-125
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   452   e-124
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   441   e-121
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   440   e-120
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   440   e-120
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   432   e-118
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...   424   e-116
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...   424   e-116
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       423   e-115
emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcripta...   414   e-113
emb|CDJ94991.1| RNA-directed DNA polymerase (reverse transcripta...   409   e-111
gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   402   e-109
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...   402   e-109
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...   397   e-107

>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  597 bits (1539), Expect = e-168
 Identities = 285/434 (65%), Positives = 349/434 (80%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IE WK LG   I+WLTKLFN IL++KKMP EWRKS L+PIYKNKGDIQ+C NYRGIKL++
Sbjct: 79   IEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGIKLMT 138

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKLWERVIE  +R ET + +NQFGFM GRS  EAI+L+RR+ E+Y   K+DLHMVFID
Sbjct: 139  HTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKRDLHMVFID 198

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            LEKAYDRV R+++W+VLEK  ++IAYI AIKDMYDG TT ++T  G++ EFP  IGLHQG
Sbjct: 199  LEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQG 258

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            S+LSPYLF ++++ +T+H+Q+ +P C+LFADDIVL+ E RE +N KLE+W+EALE  G  
Sbjct: 259  SSLSPYLFTIVLEVLTEHIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEVYGLR 318

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ISR+KTEYMEC FS    N   +V+I  + +   KSFKYLG II++NGEI +DV HRIQA
Sbjct: 319  ISRSKTEYMECKFSLRRENTNIEVEIGENILRKVKSFKYLGCIIQDNGEIEQDVNHRIQA 378

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
            GW+KWRSAS  +CD+K+PLKLKGKFY+TAIRPAMLYG EC A K EHE K+ VAE++MLR
Sbjct: 379  GWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAEVKMLR 438

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            WM GHTRLD+IRNE IR +VGVAPI EKI E+RLRWFGHV RRP++ PVRR++  E   Q
Sbjct: 439  WMSGHTRLDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRRPIEHPVRRVDEMED-GQ 497

Query: 964  IKRGRGRPKKTWKE 923
              +GRGRPKKT  E
Sbjct: 498  RAKGRGRPKKTIHE 511


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
            domestica]
          Length = 622

 Score =  590 bits (1521), Expect = e-166
 Identities = 286/466 (61%), Positives = 353/466 (75%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IE WK LG  GI+WL  LFN ILKTKKMP+EWR S L+PIYKNKGD+QNC NYRGIKL+S
Sbjct: 189  IEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMS 248

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKLWERVIE R+R ET + DNQFGFMPGRST+EAI+L+RRL E+Y + K+DLHMVFID
Sbjct: 249  HTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFID 308

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            LEKAYDRV+RDI+WR+LEK+G+++AYI AIKDMY+G  T +RT  G +  FP T+GLHQG
Sbjct: 309  LEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQG 368

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            S+LSPYLF L++DE+T H+Q  IP CMLFA DIVLIDET+EGVNAKL +WRE LESKG  
Sbjct: 369  SSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLC 428

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            +SR+KTEYMEC FS N   NE  V+I   E+  +  F+YLGSI+++NGE+++D+ HRIQA
Sbjct: 429  LSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDEDLNHRIQA 488

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
            GW KW+SAS +LCDR++PLKLKGKFY+TAIRPAML                         
Sbjct: 489  GWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAML------------------------- 523

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
                    D+IRNE IR KVGVA I+ K+RE  LRWFGHV RRP DAP+RR +   +  Q
Sbjct: 524  -------KDKIRNEDIRGKVGVAEIEGKMRENWLRWFGHVQRRPTDAPIRRCD-YGTKVQ 575

Query: 964  IKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADPT 827
             ++GRGRP+KT +E ++ D+ YL++ E+M  DR +WR  I +ADPT
Sbjct: 576  GRKGRGRPRKTLEETLRKDLEYLDLMEDMTQDRAQWRSKIHVADPT 621


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  512 bits (1318), Expect = e-142
 Identities = 263/467 (56%), Positives = 321/467 (68%), Gaps = 1/467 (0%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IE WK LG  GI+WLT LFN ILKTKKMP+EWR S L+PIYKNKGD+QNC NYRGIKL+S
Sbjct: 585  IEVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMS 644

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKLWERVIE R+R ET + DNQFGFMPGRST+EAI+L+RRL E+Y +           
Sbjct: 645  HTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDG---------- 694

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
                              K+ + + +ID ++  YD      R P  I             
Sbjct: 695  ------------------KKDLHMVFID-LEKAYD------RVPRDI------------- 716

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
                          + + L+K    CMLFADDIVLIDET+EGVNAKL +WRE LESKG  
Sbjct: 717  --------------LWRILEKK--GCMLFADDIVLIDETQEGVNAKLNLWREVLESKGLR 760

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            +SR+KTEYMEC FS N   NE  V+I   E+  +  F+YLGSI+++NGE++ D+ HRIQA
Sbjct: 761  LSRSKTEYMECKFSANGGQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDGDLNHRIQA 820

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
            GW KW+SAS +LCDR++PLKLKGKFY+TAIRPAMLYG ECWA K++H  KM VAEMRMLR
Sbjct: 821  GWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLR 880

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLE-GRESLT 968
            WMCGHTR D+IRNE IR KVGVA I  K+RE +LRWFGHV RRP DAP+RR + G E   
Sbjct: 881  WMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTE--V 938

Query: 967  QIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADPT 827
            Q +RGRGRP+KT +E ++ D+ YL++ ++M  DR +WR  I IADPT
Sbjct: 939  QGRRGRGRPRKTLEETLRKDLEYLDLTKDMTQDRAQWRSKIHIADPT 985


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  506 bits (1304), Expect = e-140
 Identities = 258/465 (55%), Positives = 321/465 (69%), Gaps = 6/465 (1%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IE WK LGG GI+WLTKLF  IL++KKMPDEWRKS L+PIY+ KGDIQ+C NYRGIKL+S
Sbjct: 984  IEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLVPIYRIKGDIQSCGNYRGIKLMS 1043

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKLW +                     G  T                          +
Sbjct: 1044 HTMKLWGK---------------------GDRT--------------------------E 1056

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            +EK   R     +W+VLEKR ++IAYI AIKDMY+G TT ++T  G++ EFP  IGLHQG
Sbjct: 1057 VEKRDTRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEFPIGIGLHQG 1116

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            S+LSPYLF L+++ +T+H+Q+ +P CMLFADDIVL+ E+RE +N KLE+WREALE  G  
Sbjct: 1117 SSLSPYLFTLVLEVLTEHIQEPVPWCMLFADDIVLMGESREDLNKKLELWREALEVYGLR 1176

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ISR+KTEYMEC FS    N+  +VKI  + +   KSFKYLG II++NGEI +DV HRIQA
Sbjct: 1177 ISRSKTEYMECKFSLRRENSNIEVKIGENILRKVKSFKYLGCIIQDNGEIEQDVNHRIQA 1236

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
            GW+KWRSAS  +CD+K+PLKLKGKFY+TAIRPAMLYG ECWA K EHE K+ VAEM+MLR
Sbjct: 1237 GWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECWAAKGEHEHKLSVAEMKMLR 1296

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            WM GHTRLD+IRNE IR +VGVAPI EK+ E+RLRWFGHV RRP++  VRR++  E   Q
Sbjct: 1297 WMSGHTRLDKIRNEDIRERVGVAPIVEKMVESRLRWFGHVGRRPIEHLVRRVDEMED-GQ 1355

Query: 964  IKRGRGRPKKTWKEAIKHDMLYLEINENMAYDR------KRWRDM 848
              +GRGRPKKT  E +K D+   E   ++   +       +WRD+
Sbjct: 1356 KAKGRGRPKKTIHEVVKRDLHETEAIHSIVLHKVYRETEGKWRDL 1400


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  486 bits (1251), Expect = e-134
 Identities = 231/379 (60%), Positives = 295/379 (77%)
 Frame = -2

Query: 1963 MPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYI 1784
            MPGRST+EAI+L+RR+ EQY   +QDLH++FIDLEKAYDRV R+I+W+ LEK+G+++AYI
Sbjct: 1    MPGRSTMEAIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILWKALEKKGVRVAYI 60

Query: 1783 DAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECM 1604
             AI+DMYD ++T +RT  G S +FP TIGLHQGS LSPYLF LI+D +T+ +Q+  P CM
Sbjct: 61   RAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCM 120

Query: 1603 LFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKID 1424
            LFADDIVL+ E+RE +N +LE WR ALE+ GF +SR+K+EYMEC F+K   +N ++VKI 
Sbjct: 121  LFADDIVLLGESREELNERLETWRRALETHGFRLSRSKSEYMECQFNKRRVSN-SEVKIG 179

Query: 1423 GHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYK 1244
             H +     FKYLGS+I+++GEI  DV HRIQAGW KWR AS +LCD K+P+KLKGKFY+
Sbjct: 180  DHIIPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLCDAKVPIKLKGKFYR 239

Query: 1243 TAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDE 1064
            TA+RP +LYG ECWA K +HE K+ VAEMRMLRWMCG TR D+IRNE IR +VGVAPI E
Sbjct: 240  TAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVE 299

Query: 1063 KIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINE 884
            K+ E RLRWFGHV RRP+D+ +RR++  E   Q  RGRGRPKKT +E IK D+    ++ 
Sbjct: 300  KMVENRLRWFGHVERRPVDSVLRRVDQMER-RQTIRGRGRPKKTIREVIKKDLEINGLDR 358

Query: 883  NMAYDRKRWRDMIRIADPT 827
            +M  DR  WR +I +ADPT
Sbjct: 359  SMVLDRTLWRKLIHVADPT 377


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 517

 Score =  475 bits (1223), Expect = e-131
 Identities = 217/350 (62%), Positives = 277/350 (79%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IE WK LG  G  WL  LFN I++TKKM DEWR+S LIPI KNKGDIQNCANYRGIKL+S
Sbjct: 167  IEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKLMS 226

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKLWERVI+ R+R ET + DNQFGFM GRST+EAI+L++R+ E+Y   K+DLH+VF D
Sbjct: 227  HTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVFFD 286

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            LEK YDRV R+I+W+ LEK+ ++IAYI AIKDMY+  +T ++T  G + +FP TIGLHQG
Sbjct: 287  LEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLHQG 346

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            S L+PYLF L++D +T+H+Q+  P CMLFADD+VL+ E+RE VN +LE WR+ALE+ GF 
Sbjct: 347  STLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETWRQALEAYGFR 406

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            +SR+KT+YMEC+FS     +  +VK+  H +     FKYLGS ++ +GEI  DV+HRIQA
Sbjct: 407  LSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEIEADVSHRIQA 466

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQK 1175
            GW KWR ASS+LCD+K+PLKL GKFY+TA+RPA+LYG ECWA K +HE +
Sbjct: 467  GWLKWRRASSVLCDKKVPLKLTGKFYRTAVRPALLYGTECWAVKSQHENQ 516


>emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 479

 Score =  454 bits (1168), Expect = e-125
 Identities = 216/465 (46%), Positives = 301/465 (64%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IEAWK LG  G+ WLT+  N +    ++PD WRKS ++PI+K KGD   C+NYRGI+L +
Sbjct: 17   IEAWKALGEYGVKWLTRFLNTVTAEGRIPDAWRKSTIVPIFKQKGDAMECSNYRGIRLTT 76

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKL+ER++++R+R    I   QFGFMP RST +AI + R++ E+Y E+++  ++ F+D
Sbjct: 77   HTMKLYERLVDSRLRELVPISQKQFGFMPERSTTDAIFIARQVMEKYREKRRPCYIAFLD 136

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            LEKA+DR+ R ++WR L KR +    I  +KDMYDG TT IRTP G +     T+G+HQG
Sbjct: 137  LEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQG 196

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSP+LF+L +D IT+ L     + +L+ADDI LI E+++ +  KL+ W+  L   G  
Sbjct: 197  SALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAESKDELQDKLQNWQRVLAESGLR 256

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ++  KT+++      +    E+ V   G  +   + F+YLGS +  +G +++ V  RI A
Sbjct: 257  LNVKKTKFL-----SSEEGTESIVDGRGEAIEKVQDFRYLGSDLAADGSVDQAVKSRINA 311

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
             W KWR ++ ILCDR+    LKGK Y+T +RP MLYG+ECW     HE ++  AEMRMLR
Sbjct: 312  AWMKWRESTGILCDRRCSRTLKGKVYRTVVRPTMLYGSECWPVSKSHEGQLHSAEMRMLR 371

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            W CG TRLDR+RNE +R  +  API  K+RE RLRWFGHV RRP   P+R  E  E   Q
Sbjct: 372  WACGWTRLDRVRNEDVRTAMQTAPIQLKMREQRLRWFGHVLRRPQSHPIR--EAMEFEAQ 429

Query: 964  IKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 830
             KR RG PKK W++ IK D+   ++    A DR +WR + R ADP
Sbjct: 430  GKRPRGAPKKRWRDVIKKDLAETKVTAEDAVDRMKWRRLTRTADP 474


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
            distachyon]
          Length = 567

 Score =  452 bits (1164), Expect = e-124
 Identities = 218/381 (57%), Positives = 285/381 (74%), Gaps = 6/381 (1%)
 Frame = -2

Query: 1954 RSTI--EAIHLIRRL--CEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAY 1787
            RSTI  E I ++ +    E+Y E+K+DLHMVFIDLEKAYD++ R++MW  LEK  +   Y
Sbjct: 189  RSTIISELIFMLDKAGDLERYKEQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKY 248

Query: 1786 IDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPEC 1607
            I  IKDMYD + T +RT  G + +FP  IGLHQGSALSPYLF L++DE+T+ +Q  IP C
Sbjct: 249  ITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWC 308

Query: 1606 MLFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNN-RNNETKVK 1430
            MLFADD+VL+D++R GVN KLE+WR+ LESKGF +SR KTEYM+C FS       E +V 
Sbjct: 309  MLFADDVVLVDDSRTGVNRKLELWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVS 368

Query: 1429 IDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKF 1250
            +DG  V    +F+YLGS+++++G+I++DV HRI+AGW KWR AS ILCD+++P KLKGKF
Sbjct: 369  LDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKF 428

Query: 1249 YKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPI 1070
            Y+TAIRPA+LYGAECW TK  H Q++ VAEMRMLRWMCGHTR DR+RN+ IR++VGVAPI
Sbjct: 429  YRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVAPI 488

Query: 1069 DEKIRETRLRWFGHVYRRPLDAPVRRLEGR-ESLTQIKRGRGRPKKTWKEAIKHDMLYLE 893
             EK+ + RLRWFGH+ RRPLDAPV    GR +    +KRGRGRP  TW+E++K D+    
Sbjct: 489  AEKLVQHRLRWFGHIQRRPLDAPVH--SGRLKRAGNVKRGRGRPNLTWEESVKRDLKGWN 546

Query: 892  INENMAYDRKRWRDMIRIADP 830
            I + +A +R  W+  I + +P
Sbjct: 547  ITKELAMNRAAWKLAIHVPEP 567


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  441 bits (1134), Expect = e-121
 Identities = 215/468 (45%), Positives = 305/468 (65%), Gaps = 3/468 (0%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IEAWK LG +G+  LT LFN IL T KMP +WR S + PIYK +G +Q+C +YRGIKL+S
Sbjct: 528  IEAWKSLGSLGVLMLTDLFNHILNTGKMPHQWRLSFITPIYKGRGSVQDCGSYRGIKLMS 587

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKL+ER+I+ R+R E ++ ++Q+GF PG  T++AI  +R L E Y E+++ LH+ F+D
Sbjct: 588  HTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREKRRALHVAFLD 647

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            L+KA+D V R  +W  L  +GI  AYI+ I+ MY    + +RT  G +  FP T+G+HQG
Sbjct: 648  LQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRPFPITVGVHQG 707

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSP+LF +++D ++ H+Q   P  M++ADDI LI E R  +  K+ +W+  LE+ G  
Sbjct: 708  SALSPFLFNVVLDTVSAHIQDQPPWLMMYADDIALIAENRLTLERKVNLWKGTLENGGLK 767

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ++ +KTEYM C     +R++ T + I       ++ F+YLGS++ E+G I+ DV  RI A
Sbjct: 768  LNVSKTEYMAC----GSRDSST-ILIGPEPAVKSEKFRYLGSVMHESGGIDHDVHGRISA 822

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
             W KWR  + ++CDR+IP KLKG  YK+ +RP +LYG+ECW     H Q++ V EM+MLR
Sbjct: 823  AWAKWREVTGVVCDRRIPPKLKGLIYKSIVRPVLLYGSECWPALSRHTQELHVTEMKMLR 882

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            WMCG TR DRIRN  IR  +GV  + +K++E RLRWFGHV RRP     +   GR+ L  
Sbjct: 883  WMCGVTRSDRIRNTFIRGSLGVRDVADKLQERRLRWFGHVTRRP-----KNYVGRKCLAI 937

Query: 964  IKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 830
            +  G    GRP+K W + +  DM    +    A DR +W  + R ADP
Sbjct: 938  LVPGARPPGRPRKRWLDVVMQDMRANGLTTEDAKDRAKWSRLSRKADP 985


>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 472

 Score =  440 bits (1131), Expect = e-120
 Identities = 214/468 (45%), Positives = 302/468 (64%), Gaps = 3/468 (0%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q+C +YRG+K++S
Sbjct: 14   IEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMS 73

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y E+++ LH+ F+D
Sbjct: 74   HTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLD 133

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            L+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +  FP ++GLHQG
Sbjct: 134  LQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQG 193

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ +W+  LE+ G  
Sbjct: 194  SALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLK 253

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G I+ DV  RI A
Sbjct: 254  LNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISA 308

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
             W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H Q++ V EM+MLR
Sbjct: 309  AWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLR 368

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            WMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP         G+  L  
Sbjct: 369  WMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP-----ENYVGKICLDM 423

Query: 964  IKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 830
               G    GRP+K W + +K DM    +    A DR +WR + R ADP
Sbjct: 424  SVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADP 471


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  440 bits (1131), Expect = e-120
 Identities = 214/468 (45%), Positives = 302/468 (64%), Gaps = 3/468 (0%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q+C +YRG+K++S
Sbjct: 527  IEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMS 586

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y E+++ LH+ F+D
Sbjct: 587  HTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLD 646

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            L+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +  FP ++GLHQG
Sbjct: 647  LQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQG 706

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ +W+  LE+ G  
Sbjct: 707  SALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLK 766

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G I+ DV  RI A
Sbjct: 767  LNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISA 821

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
             W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H Q++ V EM+MLR
Sbjct: 822  AWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLR 881

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            WMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP         G+  L  
Sbjct: 882  WMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP-----ENYVGKICLDM 936

Query: 964  IKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 830
               G    GRP+K W + +K DM    +    A DR +WR + R ADP
Sbjct: 937  SVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADP 984


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  432 bits (1112), Expect = e-118
 Identities = 210/460 (45%), Positives = 297/460 (64%), Gaps = 3/460 (0%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q+C +YRG+K++S
Sbjct: 795  IEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMS 854

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y E+++ LH+ F+D
Sbjct: 855  HTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLD 914

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            L+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +  FP ++GLHQG
Sbjct: 915  LQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQG 974

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ +W+  LE+ G  
Sbjct: 975  SALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLK 1034

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G I+ DV  RI A
Sbjct: 1035 LNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISA 1089

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
             W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H Q++ V EM+MLR
Sbjct: 1090 AWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLR 1149

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            WMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP         G+  L  
Sbjct: 1150 WMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP-----ENYVGKICLDM 1204

Query: 964  IKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWR 854
               G    GRP+K W + +K DM    +    A DR +WR
Sbjct: 1205 SVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWR 1244


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 1526

 Score =  424 bits (1091), Expect = e-116
 Identities = 202/440 (45%), Positives = 284/440 (64%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            I+AWK LG  G+ WLT+  N +    ++PD WR+S ++PI+K KGD  +C+NYRGI+L +
Sbjct: 556  IKAWKALGEHGVKWLTRFLNTVTAKGRIPDAWRRSTIVPIFKQKGDAMDCSNYRGIRLAA 615

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKL+ER++++R+R    I + QFGFMPGRST +AI + R++  +Y E+++  ++ F+D
Sbjct: 616  HTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIFITRQVMGKYREKRRPCYIAFLD 675

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            LEKA+DR+ R ++WR L KR +    I  +KDMYDG TT IRTP G +     T+G+HQG
Sbjct: 676  LEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQG 735

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSP+LF+L +D IT+ L     + +L+ADDI LI E+++ +  KL+ W+  L   G  
Sbjct: 736  SALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAESKDELQDKLQNWQRVLAESGLR 795

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            ++  K +++           E+ V   G  +   + F+YLGS +  +G +++ V  RI A
Sbjct: 796  LNVKKAKFL-----SPEEGTESVVDGRGEAIEKVQDFRYLGSDLAADGSVDQAVKSRISA 850

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
             W KWR ++ ILCD +    LKGK Y+T +RP MLYG+ECW     HE ++  AEMRMLR
Sbjct: 851  AWMKWRESTGILCDSRCSRTLKGKVYRTVVRPTMLYGSECWPVSKSHEGQLHSAEMRMLR 910

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQ 965
            W CG TRLDR RNE +R  +  API  K R  RLRWFGHV RRP   P+R  E  E   Q
Sbjct: 911  WACGWTRLDRARNEDVRTAMQTAPIQMKTRGQRLRWFGHVLRRPQSHPIR--EAMEFEAQ 968

Query: 964  IKRGRGRPKKTWKEAIKHDM 905
             KR RG PKK W++ IK D+
Sbjct: 969  GKRPRGAPKKRWRDVIKKDL 988


>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score =  424 bits (1090), Expect = e-116
 Identities = 204/348 (58%), Positives = 261/348 (75%), Gaps = 2/348 (0%)
 Frame = -2

Query: 1897 RKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISS 1718
            R +DLHMVFIDLEKAYD++ R++MW  LEK  +   YI  IKDMYD + T +RT    + 
Sbjct: 162  RNKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTD 221

Query: 1717 EFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEV 1538
            +FP  IGLHQGSALSPYLF L++DE+T+ +Q  IP CMLFADD+VL+D++R GVN KLE+
Sbjct: 222  DFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLEL 281

Query: 1537 WREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGE 1358
            WR+ LESKGF +SR KTEYM C FS   R  E +V +DG  V    +F YLGS+++E+G 
Sbjct: 282  WRQTLESKGFRLSRTKTEYMMCGFS-TTRCEEEEVSLDGQVVPRKDTFWYLGSLLQEDGG 340

Query: 1357 INKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQ 1178
            I++DV HRI+AGW KWR AS ILCD+++P KLKGKFY+T +RPAMLYGAECW TK  H Q
Sbjct: 341  IDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHVQ 400

Query: 1177 KMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPV 998
            ++ VAEM MLR MCGHTR DR+RN+ IR++VGVAPI+EK+ + RLRWFGH+  RP +APV
Sbjct: 401  QLDVAEMCMLRCMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQHRPPEAPV 460

Query: 997  R--RLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKR 860
               RL+  E+   +KRGRGRP  TW+E++K D+    I + +A DR R
Sbjct: 461  HSGRLKRAEN---VKRGRGRPNLTWEESVKRDLKDWSITKELAMDRGR 505


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  423 bits (1087), Expect = e-115
 Identities = 206/475 (43%), Positives = 303/475 (63%), Gaps = 6/475 (1%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            +EAWKCL   GI  LTKLFN +L++ KMP  WR S ++PIYK KG    C+NYRGIKL+S
Sbjct: 530  VEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGKGSKYECSNYRGIKLLS 589

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKL+ERVI++R+R+E S+  N +GF+ G ST + +  +  + E+Y E+ + L++ F+D
Sbjct: 590  HTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYREKLRPLYVAFLD 649

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            +EKA+DRV RD +W  L K+ +   Y++ I DMY    + +RT  G +       GLHQG
Sbjct: 650  MEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQTKPIAVAEGLHQG 709

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            S LSP+LF ++ID +T+  Q S     ++ADD+ +  E+R  +   L +W++ L++ G  
Sbjct: 710  SVLSPFLFGMVIDSLTEVAQSSASWTFIYADDVAICTESRTKLREALLLWKQQLQAGGLI 769

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            +S AKT YM   F+  +  + + + IDG  V++   +KYLG+++  +G +  ++ HRI A
Sbjct: 770  LSVAKTHYMS--FNDPDPGDNSPISIDGQLVNMCDQYKYLGTMMHRSGNLKCNIQHRIAA 827

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
             W KWR  S + CDR++P+KLKG  YKT IRP ++YG+E WA    +   ++VAEM+MLR
Sbjct: 828  AWLKWREVSGVTCDRRMPVKLKGMIYKTIIRPVLMYGSETWAATKRNVHTIQVAEMKMLR 887

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLD-----APVRRLEGR 980
            WMCG TRLD+IRNE++R  +GV  I +K++E+RLRW+GHV R+  D     A +  L GR
Sbjct: 888  WMCGVTRLDKIRNEYVRGSLGVRDIADKMQESRLRWYGHVKRKQPDYVGNLALLLDLPGR 947

Query: 979  ESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP-T*WD 818
                   R RGRPK  W++ +  D     + +    DR +WR  +R ADP T WD
Sbjct: 948  -------RPRGRPKTRWRDVVLKDKRECNVADEDVEDRAKWRSKVRKADPTTMWD 995


>emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 480

 Score =  414 bits (1064), Expect = e-113
 Identities = 197/464 (42%), Positives = 303/464 (65%)
 Frame = -2

Query: 2221 EAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISH 2042
            + WK  G     WLT+ FN ++  KK+P+ W++S  IPI+K KG + +C  YR I+L+SH
Sbjct: 15   DLWKSKGWNPAGWLTEFFNQVVAEKKVPESWQQSTTIPIWKKKGSLGDCTCYRPIRLLSH 74

Query: 2041 TMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDL 1862
            +MK++ER++++RIR+   +  NQ GF+   STI+AIH  R L E++ E+++ +H+ F+DL
Sbjct: 75   SMKIFERIVDSRIRDIVELTTNQCGFVAACSTIDAIHAARLLLEKHREKRRPVHLAFLDL 134

Query: 1861 EKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGS 1682
            EKA+DRV RD++W  L + G+    I+ ++ +Y    + ++T  G S+EFP ++G+HQGS
Sbjct: 135  EKAFDRVPRDVIWYALRQHGVPEELIEWVRILYTSPKSRVQTAAGTSAEFPISVGVHQGS 194

Query: 1681 ALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFTI 1502
            ALSP LF++++D ITK LQK  P  +L+ADD++L  E +  + ++++ W + L   G  +
Sbjct: 195  ALSPLLFVVVMDTITKDLQKPAPWTLLYADDVMLASEDKSELESQVQTWSDRLAMFGLRL 254

Query: 1501 SRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAG 1322
            +  KTEY+    S+        +KI+G E++ T +FKYLGS I  +G +  +   R+ A 
Sbjct: 255  NVKKTEYLTTDSSEPG-----SIKINGTELTRTTTFKYLGSAIASDGSLGFETNSRVNAA 309

Query: 1321 WNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRW 1142
            W KWRS + +LCD+ IP +LK K Y+T IRP  +YGAECW    E E ++ V E +MLRW
Sbjct: 310  WLKWRSMTGVLCDKNIPERLKSKIYRTVIRPVAIYGAECWPATKEVEARLSVMETKMLRW 369

Query: 1141 MCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQI 962
              G TRLDRI N+ IR + GVAPI +K+RE RLRW+GH  R   D+ VR++     ++  
Sbjct: 370  TAGVTRLDRISNDAIRERFGVAPIVDKMREARLRWYGHTLRAKNDS-VRKISLNLDVSG- 427

Query: 961  KRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 830
            KR RGRPK+ W + +  D+  + I+ + A++R++WR  IR ADP
Sbjct: 428  KRPRGRPKQRWLDTLHEDLKAVNIHPDQAFNREKWRQHIRKADP 471


>emb|CDJ94991.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 478

 Score =  409 bits (1051), Expect = e-111
 Identities = 196/464 (42%), Positives = 300/464 (64%)
 Frame = -2

Query: 2221 EAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISH 2042
            + WK  G     WLT+ FN ++  +K+P+ W++S  IPI+K KG   +C  YR I+L+SH
Sbjct: 15   DLWKSKGWNPAGWLTEFFNQVVAERKVPESWQQSTTIPIWKKKGSPGDCTCYRPIRLLSH 74

Query: 2041 TMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDL 1862
            +MK++ER++++RIR+   +  NQ GF+ G STI+AIH  R L E++ E+++ +H+ F+DL
Sbjct: 75   SMKIFERIVDSRIRDIVELTTNQCGFVAGCSTIDAIHATRLLLEKHREKRRPIHLAFLDL 134

Query: 1861 EKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGS 1682
            EKA+DRV RD++W  L + G+    I+ ++ +Y    + ++T  G S+EFP ++G+HQGS
Sbjct: 135  EKAFDRVPRDVIWYALRQHGVPEELIEWVRILYTSPKSRVQTAAGTSAEFPISVGVHQGS 194

Query: 1681 ALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFTI 1502
            ALSP LF++++D ITK LQK  P  +L+ADD++L  E +  + ++++ W + L   G  +
Sbjct: 195  ALSPLLFVVVMDAITKDLQKPAPWTLLYADDVMLASEDKSELESQVQTWSDRLAMFGLRL 254

Query: 1501 SRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAG 1322
            +  KTEY+    S+        +KI+G E++ T +FKYLGS I  +G +  +   R+ A 
Sbjct: 255  NVKKTEYLTTDSSEPG-----SIKINGTELTRTTTFKYLGSAIASDGSLGFETNSRVNAA 309

Query: 1321 WNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRW 1142
            W KWRS + +LCD+ IP  LK K Y+T IRP  +YG+ECW      E ++ V E +MLRW
Sbjct: 310  WLKWRSMTGVLCDKNIPECLKSKIYRTVIRPVAIYGSECWPATKAVEARLSVMETKMLRW 369

Query: 1141 MCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQI 962
              G TRLDRI N+ IR + GVAPI +K+RE RLRW+GH  R   D+ VR++ G       
Sbjct: 370  TAGVTRLDRISNDAIRERFGVAPIVDKMREARLRWYGHTLRAKNDS-VRKI-GLNLEVSG 427

Query: 961  KRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 830
            KR RGRPK+ W + +  D+  + I+ + A++R++WR  IR ADP
Sbjct: 428  KRPRGRPKQRWLDTLHEDLKAVNIHPDQAFNREKWRQHIRKADP 471


>gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 601

 Score =  402 bits (1033), Expect = e-109
 Identities = 195/439 (44%), Positives = 282/439 (64%), Gaps = 3/439 (0%)
 Frame = -2

Query: 2143 MPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGF 1964
            MP +WR S + PIYK +G +Q+C +YRG+K++SHTMKL+ER+I+ R+R E ++ + Q+GF
Sbjct: 1    MPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGF 60

Query: 1963 MPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYI 1784
             PG  T++AI  IR L E Y E+++ LH+ F+DL+KA+D V R  +W  L  +GI  AYI
Sbjct: 61   QPGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYI 120

Query: 1783 DAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECM 1604
            D I+DMY    + +RT  G +  FP ++GLHQGSALSP+LF +++D ++ ++Q   P  M
Sbjct: 121  DIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLM 180

Query: 1603 LFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKID 1424
            ++ADDI LIDE+R  +  ++ +W+  LE+ G  ++  KTEYM C        +   + I 
Sbjct: 181  MYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYMAC-----GSPDSCTIHIG 235

Query: 1423 GHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYK 1244
                  ++ F+YLGSI+ E+G I+ DV  RI A W KWR  + ++CDR+IP KLKG  YK
Sbjct: 236  PEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWRDVTGVVCDRRIPTKLKGIIYK 295

Query: 1243 TAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDE 1064
            + IRP +LYG+ECW T   H Q++ V EM+MLRWMCG TR DRIRN  IR  +GV  + +
Sbjct: 296  SIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVAD 355

Query: 1063 KIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGR---GRPKKTWKEAIKHDMLYLE 893
            K++E+RLRW+GHV RRP         G+  L     G    GRP+K W + +K DM    
Sbjct: 356  KLQESRLRWYGHVARRP-----ENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANG 410

Query: 892  INENMAYDRKRWRDMIRIA 836
            +    A DR ++  ++R A
Sbjct: 411  LTTADAKDRAKYERLLRRA 429


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score =  402 bits (1032), Expect = e-109
 Identities = 199/360 (55%), Positives = 256/360 (71%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IE WK LG + I WLTKLFN+I +  KMP+EWR+SIL+PI+KNKGD+Q C NYRGIKL+S
Sbjct: 338  IEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKGDVQICTNYRGIKLMS 397

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            HTMKLWERVIE R+R  TS+  NQFGFMPGRST+EAI L+R+L  +Y E+K+DLHMVFID
Sbjct: 398  HTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVRYREQKKDLHMVFID 457

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            LEKAY+++ R++ W  L+K  +   YI  IKDMYD   T +RT    + +FP  IGLHQG
Sbjct: 458  LEKAYNKIPRNLWW-ALDKHKVPAKYITLIKDMYDNAVTSVRTSDIDTDDFPIKIGLHQG 516

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSPYLF L++DE+T+ +Q  IP CMLFADD+VL+D++R GVN KLE+WR+ LESKG  
Sbjct: 517  SALSPYLFALLMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQTLESKGLR 576

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            +SR KTEYM C FS      E +V +DG  V    +F+YLGS+++E+G I++DV HRI+A
Sbjct: 577  LSRTKTEYMMCGFS--TTRCEEEVSLDGQVVPQKDTFRYLGSMLQEDGGIDEDVNHRIKA 634

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
            GW KWR AS ILCD     K K +  +     + +  A+ W    E  Q + V   +  R
Sbjct: 635  GWMKWRQASGILCDES-ATKAKRQVLQDGCSTSNVARAQEWLFASEEGQWLVVESAKAAR 693


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria chalumnae]
          Length = 1500

 Score =  397 bits (1019), Expect = e-107
 Identities = 197/394 (50%), Positives = 267/394 (67%)
 Frame = -2

Query: 2224 IEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLIS 2045
            IE +K +  +G+  LT+L+  I +  KMP EWR+S L+P++K KGD+Q+C NYRGI L+S
Sbjct: 386  IETFKEMKEMGLVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDCNNYRGIALMS 445

Query: 2044 HTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFID 1865
            H MKLWER+IE R+R    I +NQFGF  GRSTI+AI  ++ L E+Y E+++DLHMVF+D
Sbjct: 446  HAMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYKEKRKDLHMVFVD 505

Query: 1864 LEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQG 1685
            LEKAYDRV R ++W  + KRGI   YI  +KDMY G    +R+  G ++ FP  +G+ QG
Sbjct: 506  LEKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVGVRQG 565

Query: 1684 SALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFT 1505
            SALSP+LFIL++D +TK +QK  P CMLFADDI+L  E+RE V   LE W + +E +G  
Sbjct: 566  SALSPFLFILVLDTLTKDIQKEPPWCMLFADDIMLCAESREEVEKDLERWVQCMEERGLK 625

Query: 1504 ISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQA 1325
            +SR  T YM   FS+ +   E+ +KI   ++  T+ FKYLGSII  +G +  ++  R  A
Sbjct: 626  MSRMMTGYMVAKFSEGSDEMES-MKIGEKKLRRTEEFKYLGSIISTDGFLAGEIRARTTA 684

Query: 1324 GWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLR 1145
            GW KWR  S ++CD  IP  LKGK YK  IR A+++ AECW  + + EQ M V EMRMLR
Sbjct: 685  GWVKWREVSGVICDNGIPAWLKGKVYKNVIRQALVFRAECWCIRKKEEQDMSVTEMRMLR 744

Query: 1144 WMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRL 1043
            WM G  R D+I+NE IR ++ V  + E +RE RL
Sbjct: 745  WMLGMMRTDKIKNEEIRKRLKVTQVVE-MREKRL 777