BLASTX nr result

ID: Rehmannia23_contig00001074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00001074
         (1188 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004985207.1| PREDICTED: suppressor protein SRP40-like iso...    65   4e-08
ref|XP_002448620.1| hypothetical protein SORBIDRAFT_06g030272 [S...    59   5e-06

>ref|XP_004985207.1| PREDICTED: suppressor protein SRP40-like isoform X1 [Setaria italica]
          Length = 526

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 6/240 (2%)
 Frame = +2

Query: 446  RKVASISEKPGGDHSDNA--CMD*KKFPRLVNRSTTRILVESVSNLNNAQKWEL---GFG 610
            R+  S S  P G  S     C   K F   ++R     L+++  N    Q   +   GFG
Sbjct: 4    RRHRSYSPPPHGSGSGKKQKCSGGKGF--WISRCNPSNLIQTAKNFTLEQCDLIRRNGFG 61

Query: 611  CLLHLKKFRIPSQLSY-WLGYNFNAASCELMLSKGKSVHIEATDVKRALGFPSGSLPVMK 787
             LL+LK  + P  L Y WL  +FN A+ EL+ S G  + + A  V+  LG P G+    +
Sbjct: 62   GLLNLKCRKNPPHLLYHWLAKHFNCATSELVFSNGTVIPVTAKSVQLILGIPYGN----R 117

Query: 788  KTKLEECPLLDERKSFFMVETGKNDDDKFGNNKRARRTESGGNEMKGGNIVVARVAKKMA 967
            K K E    +D + +  M +      D + +   AR T  G               ++++
Sbjct: 118  KVKYE----MDAQSTALMKQ------DYYSDGLPARITSIG---------------EQLS 152

Query: 968  ECVDGGEWFKKYFIVLVDACIIGNNKNAYVKPALMKCIGDVYNIHNMNWCEYLLSSLIEN 1147
            E     + F + F++L  +C +    +  + P     + D+ ++  ++WC+++L  L+ +
Sbjct: 153  EMRKADDRFLRTFLLLAMSCFLCPTTSCRISPRCFPSLVDISSVAQLDWCDFVLKQLVSS 212


>ref|XP_002448620.1| hypothetical protein SORBIDRAFT_06g030272 [Sorghum bicolor]
           gi|241939803|gb|EES12948.1| hypothetical protein
           SORBIDRAFT_06g030272 [Sorghum bicolor]
          Length = 482

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
 Frame = +2

Query: 539 STTRILVESVSNLNNAQK---WELGFGCLLHLKKFRIPSQLSYWLGYNFNAASCELMLSK 709
           ST  + V+ VSNL+  QK    +LGF  LL L   R+P+ L  WL  +FNAA+  LML  
Sbjct: 32  STVEMFVDVVSNLSQQQKEVVQDLGFSGLLELCCPRLPTNLLLWLIDHFNAATRTLMLPN 91

Query: 710 GKSVHIEATDVKRALGFPSGSLPVMKKTKLEECPLLDER 826
           G +  +    V + LG P+G L +++   LE   ++ ++
Sbjct: 92  GFNFELNPKCVHKILGIPNGGLHILRFGTLESYKIIKDQ 130


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