BLASTX nr result
ID: Rehmannia23_contig00000420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00000420
(1087 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol... 98 7e-18
ref|XP_006359839.1| PREDICTED: F-box protein At5g07610-like [Sol... 91 8e-16
ref|XP_004238485.1| PREDICTED: F-box protein At5g07610-like [Sol... 90 1e-15
ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Sol... 89 3e-15
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 86 3e-14
ref|XP_006490199.1| PREDICTED: F-box protein At5g07610-like [Cit... 82 4e-13
ref|XP_006421544.1| hypothetical protein CICLE_v10006867mg [Citr... 82 5e-13
gb|EXC20948.1| F-box protein [Morus notabilis] 72 5e-10
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub... 72 5e-10
gb|AAR15451.1| F-box protein [Arabidopsis arenosa] 71 7e-10
ref|XP_006421545.1| hypothetical protein CICLE_v10005090mg [Citr... 71 9e-10
ref|XP_002319737.1| hypothetical protein POPTR_0013s06420g [Popu... 71 9e-10
gb|AAR15502.1| F-box protein [Arabidopsis arenosa] 70 1e-09
ref|NP_196378.1| F-box protein [Arabidopsis thaliana] gi|7526267... 70 1e-09
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 70 2e-09
ref|XP_006289670.1| hypothetical protein CARUB_v10003229mg [Caps... 69 3e-09
ref|XP_006421557.1| hypothetical protein CICLE_v10005086mg [Citr... 69 4e-09
ref|XP_006490022.1| PREDICTED: F-box protein At5g07610-like [Cit... 67 2e-08
ref|XP_004296208.1| PREDICTED: F-box protein At5g07610-like [Fra... 67 2e-08
ref|XP_004305934.1| PREDICTED: F-box protein At5g07610-like [Fra... 66 3e-08
>ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
Length = 403
Score = 97.8 bits (242), Expect = 7e-18
Identities = 58/112 (51%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Frame = +1
Query: 757 KIKASRTTD-EVQSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRL 933
K+K + +D E SSA+IV SIDDLL EILLR+PI+SL+ FK VSK W S+ITNP+F L
Sbjct: 23 KLKIPKFSDLEQPSSARIVDSIDDLLIEILLRVPIRSLLCFKTVSKRWLSIITNPQFSIL 82
Query: 934 RNPNPNPAAGLFL-HCLSYRARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
+ NPNPA GL L S P +YV F PP + LKF K+ GI
Sbjct: 83 CHLNPNPAIGLLLPSAYSLPINPQFDYVHFDKKNPLKPPFKNLKFIKNSSGI 134
>ref|XP_006359839.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
Length = 142
Score = 90.9 bits (224), Expect = 8e-16
Identities = 49/97 (50%), Positives = 62/97 (63%)
Frame = +1
Query: 796 SAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLFLH 975
SA V ++LL EI LRLP+KSL+R K V+K+W+ LIT+P+F RLR P NPA GLFLH
Sbjct: 14 SANEVIPNEELLIEIFLRLPVKSLVRCKCVAKKWNYLITSPKFTRLRVPCFNPARGLFLH 73
Query: 976 CLSYRARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
C S+ E++PF+ S P KL F D GI
Sbjct: 74 CSSFLINALHEFIPFTLENSIQSPFHKLIFVDDSYGI 110
>ref|XP_004238485.1| PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
Length = 410
Score = 90.1 bits (222), Expect = 1e-15
Identities = 46/89 (51%), Positives = 60/89 (67%)
Frame = +1
Query: 820 DDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLFLHCLSYRARP 999
++L+ EI LRLP+KSL+R K V+K+W++LIT+P F RLR P NPA GLFL C S+ P
Sbjct: 5 EELMIEIFLRLPVKSLVRCKCVAKKWNNLITSPEFTRLRVPCFNPARGLFLLCHSFLINP 64
Query: 1000 WIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
+ E+VPF+ P KL F DP GI
Sbjct: 65 FHEFVPFTLENPIQSPFHKLIFVDDPYGI 93
>ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
Length = 383
Score = 89.0 bits (219), Expect = 3e-15
Identities = 55/111 (49%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +1
Query: 757 KIKASRTTDEVQSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLR 936
K+K + ++ SSA+IV SIDDLL EILLR+PI SL+ FK VSK W S+IT+P F L
Sbjct: 5 KLKIQKISEP--SSARIVLSIDDLLIEILLRVPITSLLCFKTVSKRWLSIITHPHFSVL- 61
Query: 937 NPNPNPAAGLFLHC-LSYRARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
PN A GL L C S A+P +YV F PP + LKF D GI
Sbjct: 62 --YPNRAIGLVLTCPYSLPAKPQYDYVHFDKKNPSKPPFKNLKFINDSSGI 110
>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
gi|297743579|emb|CBI36446.3| unnamed protein product
[Vitis vinifera]
Length = 374
Score = 85.5 bits (210), Expect = 3e-14
Identities = 48/99 (48%), Positives = 61/99 (61%)
Frame = +1
Query: 790 QSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLF 969
+SSA IVAS DDLL E+LLRLPIKSL++FK VSK W SLIT+P F R +N PNP + LF
Sbjct: 11 ESSAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLKPNPVSALF 70
Query: 970 LHCLSYRARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
+VP +++ + P L F P+GI
Sbjct: 71 ------------SFVPLDPLQT-SAPFTSLTFVDHPRGI 96
>ref|XP_006490199.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
Length = 369
Score = 82.0 bits (201), Expect = 4e-13
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Frame = +1
Query: 790 QSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLF 969
QS A+++ ++DDLL EILLRLPIKSL++FK VSK W SLI+NP FC + P GLF
Sbjct: 24 QSPAEVIGNLDDLLTEILLRLPIKSLLKFKSVSKHWLSLISNPVFCHRLSLTRKPITGLF 83
Query: 970 LHCLSYR-ARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
+H + + + P +++ +PP R L F GI
Sbjct: 84 VHRFALQVSNPEYDFINLDS-NPPSPPFRTLTFVNTSYGI 122
>ref|XP_006421544.1| hypothetical protein CICLE_v10006867mg [Citrus clementina]
gi|557523417|gb|ESR34784.1| hypothetical protein
CICLE_v10006867mg [Citrus clementina]
Length = 407
Score = 81.6 bits (200), Expect = 5e-13
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +1
Query: 790 QSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLF 969
QS ++++A++DDLL EIL+ LPIKSL++FK VSK W SLI+NP FCR + P GLF
Sbjct: 24 QSPSEVIANLDDLLTEILICLPIKSLLKFKSVSKHWLSLISNPVFCRRLSLIRKPITGLF 83
Query: 970 LHCLSYRA-RPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
+ ++ + P +++ K +PP R L F D GI
Sbjct: 84 VDRVALKVNNPEYDFINLDS-KPSSPPFRTLTFVNDSYGI 122
>gb|EXC20948.1| F-box protein [Morus notabilis]
Length = 429
Score = 71.6 bits (174), Expect = 5e-10
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = +1
Query: 742 INMRTKI--KASRTTDEVQSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITN 915
+ RTK A+ T SA+ +A+ DDLL EILLRLPIKSL++FK VSK SLI++
Sbjct: 3 LTKRTKTCPNAAITATPPSRSAETIANNDDLLNEILLRLPIKSLLKFKSVSKHCLSLISD 62
Query: 916 PRFCRLRNPN-PNPAAGLFL 972
P F RNPN P A+GLFL
Sbjct: 63 PNFSLRRNPNFPTSASGLFL 82
>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
gi|34013883|gb|AAQ56109.1| F box protein family
[Arabidopsis lyrata subsp. lyrata]
gi|297317116|gb|EFH47538.1| F box protein family
[Arabidopsis lyrata subsp. lyrata]
Length = 421
Score = 71.6 bits (174), Expect = 5e-10
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Frame = +1
Query: 739 CINMRTKI----KASRTTDEVQSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSL 906
C RTK +++R SSA IVA+IDD+L +IL LPIK+L+RFK VSK W SL
Sbjct: 4 CSRTRTKAPRSARSNRNGGFSSSSATIVANIDDVLIQILSFLPIKTLLRFKRVSKRWLSL 63
Query: 907 ITNPRFCR--LRNPNPNPAAGLFLH 975
ITNP F +++ +P P +G FLH
Sbjct: 64 ITNPDFSNRIIKSNHPLPISGFFLH 88
>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
Length = 421
Score = 71.2 bits (173), Expect = 7e-10
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Frame = +1
Query: 751 RTKIKASRTTDEVQ------SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLIT 912
RT+ KA R+ + SSA IVA IDD+L +IL LPIK+L+RFK VSK W SLIT
Sbjct: 6 RTRTKAPRSARSRRNGGFSSSSATIVADIDDILIQILSLLPIKTLLRFKRVSKRWLSLIT 65
Query: 913 NPRFCR--LRNPNPNPAAGLFLH 975
NP F +++ +P P +G FLH
Sbjct: 66 NPDFSNRVIKSNHPLPISGFFLH 88
>ref|XP_006421545.1| hypothetical protein CICLE_v10005090mg [Citrus clementina]
gi|557523418|gb|ESR34785.1| hypothetical protein
CICLE_v10005090mg [Citrus clementina]
Length = 404
Score = 70.9 bits (172), Expect = 9e-10
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 790 QSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLF 969
Q S ++ ++DDLL EILL +PIK L++FK VSK W SLI+NP FC + P GLF
Sbjct: 22 QQSPEVTGNLDDLLTEILLCIPIKLLLKFKSVSKHWLSLISNPVFCHRLSLIRKPITGLF 81
Query: 970 LHCLSYR-ARPWIEYVPFSGIKSGNPPLRKLKFFKDPKG 1083
H + + + P +++ S +PP R L F G
Sbjct: 82 YHHFALQVSNPEYDFINLDSNPS-SPPFRTLTFVNTSYG 119
>ref|XP_002319737.1| hypothetical protein POPTR_0013s06420g [Populus trichocarpa]
gi|222858113|gb|EEE95660.1| hypothetical protein
POPTR_0013s06420g [Populus trichocarpa]
Length = 396
Score = 70.9 bits (172), Expect = 9e-10
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Frame = +1
Query: 793 SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFC-------RLRNPNPN 951
SSA+I+AS DLL EIL+R+P K L++FK VSK+W SLI++P+FC R+ NP PN
Sbjct: 7 SSAEIIASNQDLLTEILIRIPAKPLLKFKSVSKQWLSLISDPKFCIWHACHQRVLNPTPN 66
Query: 952 PAAGLFLHCLSYRARPWIEYVPFSGIKSGN 1041
L L+ Y + P +++P G S +
Sbjct: 67 ---ALLLNNF-YSSTPTFQFIPLIGDDSSS 92
>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
Length = 421
Score = 70.5 bits (171), Expect = 1e-09
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Frame = +1
Query: 751 RTKIKASRTTDEVQ------SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLIT 912
RT+ KA R+ + SSA IVA IDD+L +IL LPIK+L+RFK VSK W SLIT
Sbjct: 6 RTRTKAPRSARSHRNGGFSSSSATIVADIDDVLIQILSFLPIKTLLRFKRVSKRWLSLIT 65
Query: 913 NPRFCR--LRNPNPNPAAGLFLH 975
NP F +++ +P P +G FLH
Sbjct: 66 NPDFSNRIIKSNHPLPISGFFLH 88
>ref|NP_196378.1| F-box protein [Arabidopsis thaliana]
gi|75262676|sp|Q9FLS0.1|FB253_ARATH RecName: Full=F-box
protein At5g07610 gi|9759582|dbj|BAB11439.1| unnamed
protein product [Arabidopsis thaliana]
gi|332003802|gb|AED91185.1| F-box protein [Arabidopsis
thaliana]
Length = 420
Score = 70.1 bits (170), Expect = 1e-09
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Frame = +1
Query: 751 RTKIKASRTTDEVQ------SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLIT 912
RT+ KA R+ + SSA IVA IDD+L +IL LPIK+L+RFK VSK W SLIT
Sbjct: 6 RTRTKAPRSARSRRNGGFSSSSATIVADIDDVLIQILSFLPIKTLLRFKRVSKRWLSLIT 65
Query: 913 NPRFCR--LRNPNPNPAAGLFLH 975
NP F +++ +P P +G FLH
Sbjct: 66 NPVFSNRVIKSNHPLPISGFFLH 88
>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
gi|296090309|emb|CBI40128.3| unnamed protein product
[Vitis vinifera]
Length = 415
Score = 69.7 bits (169), Expect = 2e-09
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 793 SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFC-RLRNPNPNPAAGLF 969
SSA+ VA DLL EI LR P+K L+RF+ VSK W SLI++P FC R + G+
Sbjct: 27 SSAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVL 86
Query: 970 LHCLSYRARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
L + +++ F K+ PPLR L F DP G+
Sbjct: 87 LGLPNSN----FDFISFDEKKASEPPLRSLDFIGDPLGV 121
>ref|XP_006289670.1| hypothetical protein CARUB_v10003229mg [Capsella rubella]
gi|38260652|gb|AAR15468.1| F-box protein [Capsella
rubella] gi|482558376|gb|EOA22568.1| hypothetical
protein CARUB_v10003229mg [Capsella rubella]
Length = 417
Score = 68.9 bits (167), Expect = 3e-09
Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Frame = +1
Query: 739 CINMRTKIKAS----RTTDEVQSSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSL 906
C RTK S R SSA IVA IDD+L +IL LPIK+L+R K VSK W SL
Sbjct: 4 CSRTRTKAPRSARGHRNGRFSSSSATIVAEIDDILIQILSLLPIKTLLRSKRVSKRWFSL 63
Query: 907 ITNPRFCR--LRNPNPNPAAGLFLH 975
ITNP F +++ +P P +G FLH
Sbjct: 64 ITNPDFSNRVIKSNHPLPVSGFFLH 88
>ref|XP_006421557.1| hypothetical protein CICLE_v10005086mg [Citrus clementina]
gi|567857750|ref|XP_006421558.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
gi|557523430|gb|ESR34797.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
gi|557523431|gb|ESR34798.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
Length = 405
Score = 68.6 bits (166), Expect = 4e-09
Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 793 SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLFL 972
SS++ VAS D LL EIL+ LPIKSL++FK +SK W SLI++P F R P+ + +GL L
Sbjct: 2 SSSEAVASNDGLLTEILVHLPIKSLMKFKCISKHWQSLISSPGFSRRLYPDSHLVSGLIL 61
Query: 973 H-CLSYRARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
+ ++VP S P R L F P G+
Sbjct: 62 RPTYDCVIKKEYDFVPLK-YTSTTAPFRSLTFVNHPSGL 99
>ref|XP_006490022.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
Length = 143
Score = 66.6 bits (161), Expect = 2e-08
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Frame = +1
Query: 793 SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCRLRNPNPNPAAGLFL 972
S ++ +A+ DLL EIL+R P+KSL++FK VSK W SLI++P F R P+ + +GL L
Sbjct: 10 SPSEAIANNVDLLTEILVRSPVKSLMKFKCVSKHWQSLISSPCFTRRLYPDTHLVSGLIL 69
Query: 973 HCLSYR-ARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
H R + P +++P G K + P R L P G+
Sbjct: 70 HRTYGRLSIPEYDFLPL-GAKLISAPFRSLTVANHPLGL 107
>ref|XP_004296208.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp. vesca]
Length = 374
Score = 66.6 bits (161), Expect = 2e-08
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = +1
Query: 793 SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCR---LRNPNPNPAAG 963
++A+ + + +DLLK++LL +P K LIRFK VSK W SLI++P+FC L NPNP +
Sbjct: 9 AAAETIGNNEDLLKQLLLWIPAKPLIRFKCVSKLWLSLISDPQFCHSHTLLNPNPKFPSA 68
Query: 964 LFLHCLSYRARPWIEYVPFSGIKSGNPPLRKLKFFKDPKGI 1086
F + +I +P + NPP L F DPK +
Sbjct: 69 FFFSPTAATHPHFISLLP-----NPNPP-TPLSFIPDPKNL 103
>ref|XP_004305934.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
vesca]
Length = 415
Score = 65.9 bits (159), Expect = 3e-08
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = +1
Query: 793 SSAQIVASIDDLLKEILLRLPIKSLIRFKLVSKEWHSLITNPRFCR---LRNPNPNPAAG 963
S A+ +ASI+ +L EIL+R+P K L+RFK VSK W SLI++P+FC L+NPNP P +
Sbjct: 14 SLAETIASIEQVLTEILVRVPAKPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNP-PVSA 72
Query: 964 LF 969
+F
Sbjct: 73 VF 74