BLASTX nr result
ID: Rehmannia23_contig00000383
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00000383
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275069.1| RRM-containing RNA-binding protein-like prot... 70 1e-12
ref|XP_006358035.1| PREDICTED: zinc finger CCCH domain-containin... 70 1e-12
ref|XP_004249203.1| PREDICTED: zinc finger CCCH domain-containin... 70 1e-12
gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [... 70 1e-12
ref|XP_006351235.1| PREDICTED: zinc finger CCCH domain-containin... 68 2e-12
ref|XP_001772487.1| predicted protein [Physcomitrella patens] gi... 67 4e-11
ref|XP_006425005.1| hypothetical protein CICLE_v10028282mg [Citr... 72 8e-11
gb|EOX91717.1| CCCH-type zinc fingerfamily protein with RNA-bind... 72 8e-11
ref|XP_001766505.1| predicted protein [Physcomitrella patens] gi... 72 8e-11
gb|ESW18062.1| hypothetical protein PHAVU_006G010100g [Phaseolus... 72 1e-10
ref|XP_006847071.1| hypothetical protein AMTR_s00017p00207950 [A... 72 1e-10
ref|XP_006847068.1| hypothetical protein AMTR_s00017p00206780 [A... 72 1e-10
ref|XP_004501986.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-10
ref|XP_004501985.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-10
ref|XP_004296718.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-10
emb|CBI16011.3| unnamed protein product [Vitis vinifera] 72 1e-10
ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-10
gb|EXC28844.1| Zinc finger CCCH domain-containing protein 40 [Mo... 71 1e-10
gb|EMJ19185.1| hypothetical protein PRUPE_ppa005493mg [Prunus pe... 71 1e-10
gb|EMJ02207.1| hypothetical protein PRUPE_ppa005371mg [Prunus pe... 71 1e-10
>ref|NP_001275069.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding
protein-like protein [Solanum tuberosum]
Length = 487
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RGQCTRG ECPYRHEM GELSQQNIKD+YY V
Sbjct: 165 FYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGV 201
Score = 28.9 bits (63), Expect(2) = 1e-12
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 3 YKRNRAHICSFLRSG 47
YKRNRAH+CSF G
Sbjct: 155 YKRNRAHVCSFYIRG 169
>ref|XP_006358035.1| PREDICTED: zinc finger CCCH domain-containing protein 49 [Solanum
tuberosum]
Length = 481
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RGQCTRG ECPYRHEM GELSQQNIKD+YY V
Sbjct: 165 FYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGV 201
Score = 28.9 bits (63), Expect(2) = 1e-12
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 3 YKRNRAHICSFLRSG 47
YKRNRAH+CSF G
Sbjct: 155 YKRNRAHVCSFYIRG 169
>ref|XP_004249203.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Solanum lycopersicum] gi|133711805|gb|ABO36623.1|
putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RGQCTRG ECPYRHEM GELSQQNIKD+YY V
Sbjct: 165 FYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGV 201
Score = 28.9 bits (63), Expect(2) = 1e-12
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 3 YKRNRAHICSFLRSG 47
YKRNRAH+CSF G
Sbjct: 155 YKRNRAHVCSFYIRG 169
>gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 69.7 bits (169), Expect(2) = 1e-12
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RGQCTRG ECPYRHEM GELSQQNIKD+YY V
Sbjct: 165 FYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGV 201
Score = 28.9 bits (63), Expect(2) = 1e-12
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 3 YKRNRAHICSFLRSG 47
YKRNRAH+CSF G
Sbjct: 155 YKRNRAHVCSFYIRG 169
>ref|XP_006351235.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Solanum tuberosum]
Length = 479
Score = 68.2 bits (165), Expect(2) = 2e-12
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
F++RGQCTRG ECPYRHEM GELSQQNIKD+YY V
Sbjct: 165 FFIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGV 201
Score = 29.3 bits (64), Expect(2) = 2e-12
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 3 YKRNRAHICSFLRSG 47
YKRNRAH+CSF G
Sbjct: 155 YKRNRAHVCSFFIRG 169
>ref|XP_001772487.1| predicted protein [Physcomitrella patens]
gi|162676284|gb|EDQ62769.1| predicted protein
[Physcomitrella patens]
Length = 428
Score = 67.4 bits (163), Expect(2) = 4e-11
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYY 138
FYVR +CTRG ECPYRHEM V GELSQQNIKD+YY
Sbjct: 152 FYVREECTRGSECPYRHEMPVTGELSQQNIKDRYY 186
Score = 25.8 bits (55), Expect(2) = 4e-11
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 3 YKRNRAHICSF 35
YKRN AHICSF
Sbjct: 142 YKRNCAHICSF 152
>ref|XP_006425005.1| hypothetical protein CICLE_v10028282mg [Citrus clementina]
gi|568870551|ref|XP_006488465.1| PREDICTED: zinc finger
CCCH domain-containing protein 49-like [Citrus sinensis]
gi|557526939|gb|ESR38245.1| hypothetical protein
CICLE_v10028282mg [Citrus clementina]
Length = 494
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FYVRG+CTRG ECPYRHEM V GELSQQNIKD+YY V
Sbjct: 165 FYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGV 201
>gb|EOX91717.1| CCCH-type zinc fingerfamily protein with RNA-binding domain
[Theobroma cacao]
Length = 495
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FYVRG+CTRG ECPYRHEM V GELSQQNIKD+YY V
Sbjct: 165 FYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGV 201
>ref|XP_001766505.1| predicted protein [Physcomitrella patens]
gi|162682414|gb|EDQ68833.1| predicted protein
[Physcomitrella patens]
Length = 474
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FYVRG+CTRG ECPYRHEM V GELSQQNIKD+YY V
Sbjct: 165 FYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGV 201
>gb|ESW18062.1| hypothetical protein PHAVU_006G010100g [Phaseolus vulgaris]
Length = 480
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RG+CTRG ECPYRHEM V GELSQQNIKD+YY V
Sbjct: 165 FYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGV 201
>ref|XP_006847071.1| hypothetical protein AMTR_s00017p00207950 [Amborella trichopoda]
gi|548850100|gb|ERN08652.1| hypothetical protein
AMTR_s00017p00207950 [Amborella trichopoda]
Length = 472
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FYVRG+CTRG ECPYRHEM + GELSQQNIKD+YY V
Sbjct: 164 FYVRGECTRGAECPYRHEMPITGELSQQNIKDRYYGV 200
>ref|XP_006847068.1| hypothetical protein AMTR_s00017p00206780 [Amborella trichopoda]
gi|548850097|gb|ERN08649.1| hypothetical protein
AMTR_s00017p00206780 [Amborella trichopoda]
Length = 363
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FYVRG+CTRG ECPYRHEM + GELSQQNIKD+YY V
Sbjct: 56 FYVRGECTRGAECPYRHEMPITGELSQQNIKDRYYGV 92
>ref|XP_004501986.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
isoform X2 [Cicer arietinum]
Length = 485
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RG+CTRG ECPYRHEM V GELSQQNIKD+YY V
Sbjct: 165 FYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGV 201
>ref|XP_004501985.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
isoform X1 [Cicer arietinum]
Length = 484
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RG+CTRG ECPYRHEM V GELSQQNIKD+YY V
Sbjct: 165 FYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGV 201
>ref|XP_004296718.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Fragaria vesca subsp. vesca]
Length = 497
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RG+CTRG ECPYRHEM V GELSQQNIKD+YY V
Sbjct: 165 FYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGV 201
>emb|CBI16011.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FYVRG+CTRG ECPYRHEM + GELSQQNIKD+YY V
Sbjct: 165 FYVRGECTRGAECPYRHEMPITGELSQQNIKDRYYGV 201
>ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Vitis vinifera]
Length = 474
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FYVRG+CTRG ECPYRHEM + GELSQQNIKD+YY V
Sbjct: 165 FYVRGECTRGAECPYRHEMPITGELSQQNIKDRYYGV 201
>gb|EXC28844.1| Zinc finger CCCH domain-containing protein 40 [Morus notabilis]
Length = 494
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RG+CTRG ECPYRHEM + GELSQQNIKD+YY V
Sbjct: 165 FYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGV 201
>gb|EMJ19185.1| hypothetical protein PRUPE_ppa005493mg [Prunus persica]
Length = 458
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RG+CTRG ECPYRHEM + GELSQQNIKD+YY V
Sbjct: 165 FYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGV 201
>gb|EMJ02207.1| hypothetical protein PRUPE_ppa005371mg [Prunus persica]
Length = 464
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 34 FYVRGQCTRGPECPYRHEMSVGGELSQQNIKDQYYSV 144
FY+RG+CTRG ECPYRHEM + GELSQQNIKD+YY V
Sbjct: 131 FYIRGECTRGAECPYRHEMPITGELSQQNIKDRYYGV 167