BLASTX nr result
ID: Rehmannia23_contig00000372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00000372
(484 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31948.3| unnamed protein product [Vitis vinifera] 74 2e-11
ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 73 3e-11
ref|XP_006355109.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 68 1e-09
ref|XP_004238824.1| PREDICTED: E3 ubiquitin-protein ligase Praja... 67 2e-09
ref|XP_004238823.1| PREDICTED: E3 ubiquitin-protein ligase Praja... 67 2e-09
ref|XP_002316133.1| zinc finger family protein [Populus trichoca... 64 2e-08
ref|XP_002522447.1| zinc finger protein, putative [Ricinus commu... 60 3e-07
ref|XP_002311305.1| zinc finger family protein [Populus trichoca... 60 3e-07
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides] 60 3e-07
ref|XP_006574908.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 57 3e-06
gb|ACU13632.1| unknown [Glycine max] 57 3e-06
gb|EOY01904.1| RING/U-box superfamily protein, putative [Theobro... 56 6e-06
>emb|CBI31948.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Frame = -1
Query: 307 KKMASETEYSEQSSP--FMETLINSSNRDISLFIPVILGLT-------AAGPPQETQDQA 155
++MASE+E S SS F+E LI+S NRD+S+FIP ILG T + P ET D
Sbjct: 113 EEMASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTP 172
Query: 154 APRESRDRIILVNPFTQSMVVLESN 80
P RDRIIL+NPFTQ M+V+E N
Sbjct: 173 TP---RDRIILINPFTQGMIVIEGN 194
>ref|XP_002273461.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 233
Score = 73.2 bits (178), Expect = 3e-11
Identities = 44/83 (53%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Frame = -1
Query: 301 MASETEYSEQSSP--FMETLINSSNRDISLFIPVILGLT-------AAGPPQETQDQAAP 149
MASE+E S SS F+E LI+S NRD+S+FIP ILG T + P ET D P
Sbjct: 1 MASESEASGASSSASFLERLISSRNRDLSMFIPFILGFTDTTTRQESDDPDDETTDTPTP 60
Query: 148 RESRDRIILVNPFTQSMVVLESN 80
RDRIIL+NPFTQ M+V+E N
Sbjct: 61 ---RDRIILINPFTQGMIVIEGN 80
>ref|XP_006355109.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
tuberosum]
Length = 207
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLT----AAGPPQETQDQAAPRESRD 134
MASE SE S ME L+NS N D+SLF+P IL +T ++ P +ET + E D
Sbjct: 1 MASE---SESVSSLMENLMNSRNIDLSLFLPFILSITNNSISSNPDEETDESTTQSEFSD 57
Query: 133 RIILVNPFTQSMVVLES 83
RIILVNP TQ+M+V+E+
Sbjct: 58 RIILVNPLTQNMIVMET 74
>ref|XP_004238824.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like isoform 2
[Solanum lycopersicum]
Length = 156
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Frame = -1
Query: 280 SEQSSPFMETLINSSNRDISLFIPVILGLT----AAGPPQETQDQAAPRESRDRIILVNP 113
SE S ME L+NS NRD SLF+P IL +T ++ P +E+ + E DRIILVNP
Sbjct: 5 SESESSLMENLMNSGNRDSSLFLPFILSITNNSISSNPDEESDESTTRSEFSDRIILVNP 64
Query: 112 FTQSMVVLES 83
TQ+M+V+E+
Sbjct: 65 LTQNMIVMET 74
>ref|XP_004238823.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like isoform 1
[Solanum lycopersicum]
Length = 206
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Frame = -1
Query: 280 SEQSSPFMETLINSSNRDISLFIPVILGLT----AAGPPQETQDQAAPRESRDRIILVNP 113
SE S ME L+NS NRD SLF+P IL +T ++ P +E+ + E DRIILVNP
Sbjct: 5 SESESSLMENLMNSGNRDSSLFLPFILSITNNSISSNPDEESDESTTRSEFSDRIILVNP 64
Query: 112 FTQSMVVLES 83
TQ+M+V+E+
Sbjct: 65 LTQNMIVMET 74
>ref|XP_002316133.1| zinc finger family protein [Populus trichocarpa]
gi|118483434|gb|ABK93617.1| unknown [Populus
trichocarpa] gi|222865173|gb|EEF02304.1| zinc finger
family protein [Populus trichocarpa]
Length = 218
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLTAAGPPQETQ-DQAAPR--ESRDR 131
MASETE+ + S E L+ +RD+SLF+P ILG T+ ++ DQ AP+ + +R
Sbjct: 1 MASETEFPAEFSSMFERLLR--HRDLSLFLPFILGFTSTNTTEQRDPDQEAPQTTDPNER 58
Query: 130 IILVNPFTQSMVVLE 86
IIL+NPFTQ MVV+E
Sbjct: 59 IILINPFTQGMVVIE 73
>ref|XP_002522447.1| zinc finger protein, putative [Ricinus communis]
gi|223538332|gb|EEF39939.1| zinc finger protein,
putative [Ricinus communis]
Length = 233
Score = 60.1 bits (144), Expect = 3e-07
Identities = 44/107 (41%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLTAA-------GPPQETQDQAAPRE 143
MASET+ E SS F L +RD+SLF+P ILG T+ P QE Q+ + E
Sbjct: 1 MASETQVPELSSAFERFL---RHRDLSLFLPFILGFTSTTTNTNTENPDQENQETTSRHE 57
Query: 142 SRDRIILVNPFTQSMVVLESNXXXXXXXXXXXXXXXXXGKNGQRPAS 2
RIIL+NPFTQ MVV+E KNG PAS
Sbjct: 58 ---RIILINPFTQGMVVIEGT------ESLDSLLRELAAKNGHPPAS 95
>ref|XP_002311305.1| zinc finger family protein [Populus trichocarpa]
gi|222851125|gb|EEE88672.1| zinc finger family protein
[Populus trichocarpa]
Length = 225
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLTAAGPPQETQDQAAPR--ESRDRI 128
MASETE + S E L+ +RD+SLF+P I G T+ +E P+ + +RI
Sbjct: 1 MASETELPAELSSMFERLLR--HRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPNERI 58
Query: 127 ILVNPFTQSMVVLESNXXXXXXXXXXXXXXXXXGKNGQRPAS 2
IL+NP TQ MVV+E KNGQ PAS
Sbjct: 59 ILINPLTQGMVVIEG------AASLESLLRDIGNKNGQPPAS 94
>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 225
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLTAAGPPQETQDQAAPR--ESRDRI 128
MASETE + S E L+ +RD+SLF+P I G T+ +E P+ + +RI
Sbjct: 1 MASETELPAELSSMFERLLR--HRDLSLFLPFIFGFTSTNSTEERDPDQEPQTTDPNERI 58
Query: 127 ILVNPFTQSMVVLESNXXXXXXXXXXXXXXXXXGKNGQRPAS 2
IL+NP TQ MVV+E KNGQ PAS
Sbjct: 59 ILINPLTQGMVVIEG------AASLESLLRDMGNKNGQPPAS 94
>ref|XP_006574908.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 303
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLTAAGPPQETQD---QAAPRES--R 137
MASETE + S E NRD+SLF+P + G + A P + + D + AP E+ R
Sbjct: 73 MASETEVPDIISSVFERF--QQNRDMSLFLPFLFGFSDATPGRNSDDPDHETAPTEAPQR 130
Query: 136 DRIILVNPFTQSMVVLE 86
RIILVNP TQ MVV++
Sbjct: 131 QRIILVNPLTQGMVVID 147
>gb|ACU13632.1| unknown [Glycine max]
Length = 187
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLTAAGPPQETQD---QAAPRES--R 137
MASETE + S E NRD+SLF+P + G + A P + + D + AP E+ R
Sbjct: 1 MASETEVPDIISSVFERF--QQNRDMSLFLPFLFGFSDATPGRNSDDPDHETAPTEAPQR 58
Query: 136 DRIILVNPFTQSMVVLE 86
RIILVNP TQ MVV++
Sbjct: 59 QRIILVNPLTQGMVVID 75
>gb|EOY01904.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 227
Score = 55.8 bits (133), Expect = 6e-06
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Frame = -1
Query: 301 MASETEYSEQSSPFMETLINSSNRDISLFIPVILGLTAAGPPQ-------ETQDQAAPRE 143
MASETE E SS F L +RD+ F+P ILG ++ E DQ +P+E
Sbjct: 1 MASETEAPEISSLFERLL---RHRDLYFFLPFILGFSSNNSNNSVSRENPEDPDQESPQE 57
Query: 142 S---RDRIILVNPFTQSMVVLE 86
+ R+RIIL+NPFTQ MVV+E
Sbjct: 58 TTSQRERIILINPFTQGMVVIE 79