BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00000193
         (3787 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR08426.1| phytochrome A [Orobanche minor]                       1914   0.0  
ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuber...  1838   0.0  
ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|7657416...  1820   0.0  
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...  1820   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1816   0.0  
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...  1814   0.0  
gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]                      1812   0.0  
gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]                      1810   0.0  
gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]                      1808   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1770   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1769   0.0  
gb|EOY11803.1| Phytochrome A [Theobroma cacao]                       1766   0.0  
ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citr...  1750   0.0  
gb|EXB57569.1| Phytochrome type A [Morus notabilis]                  1748   0.0  
ref|XP_002318913.1| phytochrome A family protein [Populus tricho...  1747   0.0  
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...  1739   0.0  
gb|AAR08425.1| phytochrome A [Cuscuta pentagona]                     1737   0.0  
gb|AEK26583.1| phytochrome A [Populus tremula]                       1731   0.0  
ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesc...  1728   0.0  
dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]                  1722   0.0  

>gb|AAR08426.1| phytochrome A [Orobanche minor]
          Length = 1123

 Score = 1914 bits (4959), Expect = 0.0
 Identities = 959/1122 (85%), Positives = 1022/1122 (91%), Gaps = 2/1122 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            M+S+QPG+SSTNSA+SR SARIIAQTSIDAKL A              VRVTN   G   
Sbjct: 1    MASSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSE 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLHQIQKGK IQ FGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIGS+IRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII
Sbjct: 121  PLLGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKPHEVPMTAAGALQSYKLAAKAI  LQ+LP GS+ERLCDTMVQ+VFELTGYDRVM
Sbjct: 181  DFEPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
            IYKFH+DDHGEVFTEITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV
Sbjct: 241  IYKFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQH-PEKR 1364
            VQD NL  DLTLCGSTLRAPH CH QYMENMNSIASLVMS           D    P KR
Sbjct: 301  VQDDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKR 360

Query: 1365 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLCD 1544
            KRLWGLVVCHNT PRF+PFPLRYACEFL QVF+IHVNKELELENQM EKNILRTQTLLCD
Sbjct: 361  KRLWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCD 420

Query: 1545 MLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRDS 1724
            +LLRD PLGIVSQSPNVMDLVKCDGA+LL+K  KYR+GLTP+DFQIRDIVSWLDEYH+DS
Sbjct: 421  LLLRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDS 480

Query: 1725 TGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGEK 1904
            TGLSTDSLYDAGFPGALALG+A+CGMAAV+ITD DWLFWFRSHTAAEIRWGGAKHE   K
Sbjct: 481  TGLSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAK 540

Query: 1905 DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIHA 2084
            DDGRKMHPRSSF+AFLEVVKTRSLPWKDYEMD IHSLQLILRNA+KE E+KDL+ REIHA
Sbjct: 541  DDGRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHA 600

Query: 2085 RLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAIG 2264
            RLN+LQIDG++E+EAVTSEMVRLIETA+VPIF+V VDGLVNGWNTKI+DLTGLSV  AIG
Sbjct: 601  RLNELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIG 660

Query: 2265 RHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDVK 2444
             HFLALVEDSSADTVSKML LA+QGKEE +VQFEIKTHG RSESGPISLIVNACAS+DVK
Sbjct: 661  MHFLALVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVK 720

Query: 2445 ESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAAM 2624
            E+VVGVCFIAQDITTQKSMMDKFTRIEGDYR+I+QNPNPLIPPIFGTDEFGWCSEWNAAM
Sbjct: 721  ENVVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAM 780

Query: 2625 TKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGFF 2804
             KLSGW R+ VIDKMLLGEVFG+NKACCRLKNQEAYVNLG+VLNN VTGQESGK+ FGFF
Sbjct: 781  IKLSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFF 840

Query: 2805 SRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLAY 2984
            SR+GKYV CLLCVSKK+D EG+VTGLFCF            H+QRISEQTASKRLRVLAY
Sbjct: 841  SRSGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAY 900

Query: 2985 IRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYLD 3164
            IRREI++PLSGIIFSRK+MEGTDL+DEQKN++RTSLHCQ Q+NKIL+DTDLDHIIEGYLD
Sbjct: 901  IRREIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLD 960

Query: 3165 LEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLLV 3344
            LEMVEFKLHEVLIASISQV+ KSNGKGI IVDNL PNLSNETLYGDSLRLQQVLAAFLL+
Sbjct: 961  LEMVEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDSLRLQQVLAAFLLI 1020

Query: 3345 SVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITHGGGVPQELLNQMFGDE-ADASED 3521
            +V+STP GGQLGVAATLAK+SIGE VQLG LE RITHGGGVPQE+LNQMFGDE  DASED
Sbjct: 1021 AVDSTPSGGQLGVAATLAKDSIGEFVQLGRLECRITHGGGVPQEILNQMFGDEPTDASED 1080

Query: 3522 GISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKAN 3647
            GISLFISRKLVKLM GD+QYLREAGRS+FIISVE+AISNK N
Sbjct: 1081 GISLFISRKLVKLMKGDIQYLREAGRSTFIISVEIAISNKPN 1122


>ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1838 bits (4760), Expect = 0.0
 Identities = 913/1123 (81%), Positives = 1001/1123 (89%), Gaps = 3/1123 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSST S+RS+HSARIIAQTSIDAKLHA              VRVTNVA GE R
Sbjct: 1    MSSSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQR 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            P+SDKVTTAYLHQIQKGKFIQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+H
Sbjct: 61   PKSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSLII
Sbjct: 121  PVLGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV
Sbjct: 241  GYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            VQD  L  DLTLCGSTLRAPH CHLQYMENMNSIASLVM+             D    +K
Sbjct: 301  VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ  EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPN+MDL+KCDGA LLYK+K +R+G+ PSDFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGFPGALALGDAVCGMAAVRI+D DWLFW+RSHTAAE+RWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFK+ +  + +   IH
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTISIH 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +LNDL+IDG+QELEAVT+EMVRLIETASVPIFAVDVDG VNGWNTK+A+LTGL VD AI
Sbjct: 601  TKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G+H L LVEDSS DTV+KMLELA+QGKEERNV+FEIKTHGP  +S PISLIVNACAS+DV
Sbjct: 661  GKHLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKTHGPSRDSSPISLIVNACASKDV 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
            ++SVVGVCFIAQDIT QKS+MDKFTRIEGDYRAI+QNP+PLIPPIFGTD+FGWCSEWN+A
Sbjct: 721  RDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MTKL+GWRRDDV+DKMLLGEVFG   ACCRLKNQEA+VN G++LNNA+TGQES KIPFGF
Sbjct: 781  MTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+R GKYVECLLCVSK+LD EGAVTGLFCF            HVQR+SEQTA KRL+VLA
Sbjct: 841  FARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YIRR+I+NPLSGIIFSRKM+EGT L +EQKN+L TS  CQ QL+KILDDTDLD IIEGYL
Sbjct: 901  YIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEM+EFKLHEVL+ASISQVMMKSNGK IMI +++  +L NETLYGDS RLQQVLA FLL
Sbjct: 961  DLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLL 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            VSVNSTP GG+L ++  L K+ IGESVQL  LEFRI H GGGVP+ELL+QMFG EADASE
Sbjct: 1021 VSVNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKAN 3647
            +GISL +SRKLVKLMNG+VQYLREAGRS+FIISVELA++ K++
Sbjct: 1081 EGISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS 1123


>ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|76574169|gb|ABA46868.1|
            phytochrome A [Solanum tuberosum]
          Length = 1123

 Score = 1820 bits (4715), Expect = 0.0
 Identities = 906/1122 (80%), Positives = 991/1122 (88%), Gaps = 3/1122 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSS  S+RS+HSARIIAQTSIDAKLHA              VRVT+VA  E R
Sbjct: 1    MSSSRPSQSSATSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEER 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            P+SDKVTTAYLHQIQKGKFIQPFG LLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+H
Sbjct: 61   PKSDKVTTAYLHQIQKGKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSLII
Sbjct: 121  PVLGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV
Sbjct: 241  GYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            VQD  L  DLTLCGSTLRAPH CHLQYMENMNS+ASLVM+             D    +K
Sbjct: 301  VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ  EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPN+MDLVKCDGA LLYK+K +R+G+ PSDFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGFPGALALGDAVCGMAAVRI+D DWLFW+RSHTAAE+RWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFK+ +  + +   IH
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIH 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +LNDL+IDG+QELEAVT+EM+RLIETASVPIFAVDVDG VNGWNTK+A+LTGL VD AI
Sbjct: 601  TKLNDLRIDGMQELEAVTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G+H L LVEDSS DTV+KMLELA+QGKEERNV+FEIK HGP  +S PISLIVNACAS+DV
Sbjct: 661  GKHLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDV 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
            ++SVVGVCFIAQDIT QKS+MDKFTRIEGDYRAI+QNP+PLIPPIFGTD+FGWCSEWN+A
Sbjct: 721  RDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MTKL+GWRRDDV+DKMLLGEVFG   ACCRLKNQEA+VN G++LNNA+TGQES KIPFGF
Sbjct: 781  MTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F R GKYVECLLCVSK+LD EGAVTGLFCF            HVQR+SEQTA KRL+VLA
Sbjct: 841  FGRYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YIRR+IKNPLSGIIFS KM+EGT L +EQKN+L TS  CQ QLNKILDDTDLD IIEGYL
Sbjct: 901  YIRRQIKNPLSGIIFSWKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEM+EFKLHEVL+ASISQVMMKSNGK IMI +++  +L NETLYGDS RLQQVLA FLL
Sbjct: 961  DLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLL 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            VSVNSTP GGQL ++  L K+ IGESVQL  LEFRI H GGGVP+ELL+QM G E DASE
Sbjct: 1021 VSVNSTPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMLGSEVDASE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKA 3644
            +GI L +SRKLVKLMNG+VQYLREAGRS+FIISVELA++ K+
Sbjct: 1081 EGIFLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKS 1122


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1820 bits (4713), Expect = 0.0
 Identities = 906/1123 (80%), Positives = 994/1123 (88%), Gaps = 3/1123 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSST S+RS+HSARIIAQTSIDAKLHA              VRVTNVA GE R
Sbjct: 1    MSSSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQR 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            P+SDKVTTAYLHQIQKGKFIQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+H
Sbjct: 61   PKSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG +IRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSLII
Sbjct: 121  PVLGIGIDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV
Sbjct: 241  GYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            VQD  L  DLTLCGSTLRAPH CHLQYMENMNSIASLVM+             D    +K
Sbjct: 301  VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVV HNTTPRF PFPLRYACEFLAQVFAI VNKELELENQ  EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVSHNTTPRFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPN+MDL+KCDGA LLYK+K +R+G+ PSDFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGFPGALALGDAVCGMAAVRI+D DWLFW+RSHTAAE+RWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFK FLEVVKTRS+PWKDYEMD IHSLQLILRNAFK+ +  + +   IH
Sbjct: 541  KDDGRKMHPRSSFKGFLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIH 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +LNDL+IDG+QELEAVT+EMVRLIETASVPIFAVDVDG VNGWNTK+A+LTGL VD AI
Sbjct: 601  TKLNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G+H L LVEDSS DTV+KMLELA+QG+EERNV+FEIKTHGP  +S PISLIVNACAS+DV
Sbjct: 661  GKHLLTLVEDSSVDTVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDV 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
            ++SVVGVCFIAQDIT QKS+MDKFTRIEGDYRAI+QNP+PLIPPIFGTD+FGWCSEWN+A
Sbjct: 721  RDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MT L+GWRRDDV+DKMLLGEVFG   ACCRLKNQEA+VN G++LNNA+TGQES KIPFGF
Sbjct: 781  MTMLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+R GKYVECLLCVSK+LD EGAVTGLFCF            HVQR+SEQTA KRL+VLA
Sbjct: 841  FARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YIRR+I+NPLSGIIFSRKM+EGT L +EQKN+L TS  CQ QL+KILDDTDLD IIEGYL
Sbjct: 901  YIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEM+EFKLHEVL+ASISQVMMKSNGK IMI +++  +L NETLYGDS RLQQVLA FLL
Sbjct: 961  DLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLL 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            VSVNSTP GG+L ++  L K+ IGESVQL  LEFRI H GGGVP+ELL+QMFG EADASE
Sbjct: 1021 VSVNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKAN 3647
            +GISL +SRKLVKLMNG+VQYLREAGRS+FIISVELA++ K++
Sbjct: 1081 EGISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS 1123


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1816 bits (4705), Expect = 0.0
 Identities = 906/1123 (80%), Positives = 998/1123 (88%), Gaps = 3/1123 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSST SARS+HSARIIAQT+IDAKLHA              VRVT+VA  E +
Sbjct: 1    MSSSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERK 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            P+SD+VTTAYL+QIQKGKFIQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVG+ 
Sbjct: 61   PKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGEL 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P LGIG++IRTIFT PSAAALQKALGFGEVSLLNP+LVHCKTSGKP+YAI+HRVTGSLII
Sbjct: 121  PALGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV  EITKPGL+PY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV
Sbjct: 241  TYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            VQD  L  DLTLCGSTLRAPH CHLQYMENM+SIASLVM+             D    +K
Sbjct: 301  VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+R APLGIVSQSPN+MDLVKCDGA LLYK+K +R+G+TPSDFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGFPGALALGD VCGMAAVRI+D  WLFW+RSHTAAE+RWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNA K+ +  D +   IH
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIH 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +LNDL+IDG+QELEAVT+EMVRLIETASVPIFAVDVDG +NGWNTKIA+LTGL VD AI
Sbjct: 601  TKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G H L LVEDSS DTVSKMLELA+QGKEERNV+FEIKTHGP  +S PISLIVNACASRDV
Sbjct: 661  GNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDV 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             +SVVGVCFIAQDIT QK++MDKFTRIEGDYRAI+QNP+PLIPPIFGTD+FGWCSEWN+A
Sbjct: 721  GDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MTKL+GWRRDDVIDKMLLGEVFG   ACCRLKNQEA+VN G+VLNNA+TGQE  KI FGF
Sbjct: 781  MTKLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+RNGKYVECLLCVSK+LD EGAVTGLFCF            H+QR+SEQTA KRL+VLA
Sbjct: 841  FARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YIRR+I+NPLSGIIFSRKM+EGT+L +EQKN+LRTS  CQ QLNKILDDTDLD II+GYL
Sbjct: 901  YIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEM+EFKLHEVL+ASISQ+MMKSNGK IMIV+++  +L NETLYGDS RLQQVLA FLL
Sbjct: 961  DLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLL 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            V VNSTP GGQL ++ TL K+ IGESVQL  LE RI+H GGGVP+ELL+QMFG EA+ASE
Sbjct: 1021 VCVNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKAN 3647
            +GISL ISRKLVKLMNG+VQYLREAGRS+FIISVELA++ K++
Sbjct: 1081 EGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATKSS 1123


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1814 bits (4699), Expect = 0.0
 Identities = 901/1123 (80%), Positives = 995/1123 (88%), Gaps = 3/1123 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSST S+RS+HSARI+AQTSIDAKLHA              VRVT+VA  E +
Sbjct: 1    MSSSRPSQSSTTSSRSKHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEK 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            P+SDKVTTAYLHQIQKGKFIQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+H
Sbjct: 61   PKSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFT PS AALQKALGFGEVSLLNP+LVHCK SGKPFYAI+HRVTGSLI+
Sbjct: 121  PVLGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIL 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFH+DDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV
Sbjct: 241  GYKFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            VQD  L  DLTLCGSTLRAPH CHLQYMENMNSIASLVM+             D    +K
Sbjct: 301  VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ  EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPN+MDLVKCDGA LLYK+K +R+G+ PSDFQ++DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGFPGALALGDAVCGMAAVRI+D DWLFWFRSHTAAE+RWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFK+ E  + +   I+
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIY 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +LNDL+IDG+QELE+VT+EMVRLIETA VPI AVDVDG VNGWNTKIA+LTGL VD AI
Sbjct: 601  KKLNDLKIDGMQELESVTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G+H L LVEDSS DTV+KMLELA+QGKEE+NV+FEIKTHGP  +S PISLIVNACAS+DV
Sbjct: 661  GKHLLTLVEDSSVDTVNKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDV 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
            +++VVGVCF+A DIT QKS+MDKFTRIEGDYRAI+QNP+PLIPPIFGTD+FGWCSEWN A
Sbjct: 721  RDNVVGVCFMAHDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MTKL+GWRRDDV+DKMLLGEVFG   ACCRLKNQEA+VN G+VLNNA+TGQES KIPFGF
Sbjct: 781  MTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+R GKYVECLLCVSK+LD EGAVTGLFCF            +VQR+SEQTA KRL+VLA
Sbjct: 841  FARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YIRR+I+NPLSGIIFSRKM+EGT L +EQKN+L TS  CQ QLNKILDDTDLD II+GYL
Sbjct: 901  YIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEM+EFKLHEVL+ASISQVMMKSNGK IMI +++  +L NETLYGDS RLQQVLA FLL
Sbjct: 961  DLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLL 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            VSVN+TP GGQL ++  L K+ IGESVQL  LEFRI H GGGVP+ELL QMFG EADASE
Sbjct: 1021 VSVNATPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKAN 3647
            +GISL +SRKLVKLMNG+VQYLREAG+S+FIISVELA++  ++
Sbjct: 1081 EGISLLVSRKLVKLMNGEVQYLREAGQSTFIISVELAVATNSS 1123


>gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]
          Length = 1127

 Score = 1812 bits (4694), Expect = 0.0
 Identities = 903/1127 (80%), Positives = 1001/1127 (88%), Gaps = 6/1127 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MS+++P QSS+NSARS+HSARIIAQTSIDAKLHA              VRVT+V  G  +
Sbjct: 1    MSTSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQK 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLHQIQK K+IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFT+PSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLI+
Sbjct: 121  PVLGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIV 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
            IYKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+V
Sbjct: 241  IYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQHP--EK 1361
            VQD  L++DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+             +    +K
Sbjct: 301  VQDEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGL+VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLIVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPN+MDL+KCDGA LL+KSK +R+G+TP+DFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLHDIVSWLSEYHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGF GALALGDA+CGMA+VRI+D DWLFWFRSHTAAE+RWGGAKHEP E
Sbjct: 481  STGLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGAKHEPDE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEGEDKDL--DGR 2072
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF KE +  D   +  
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANAN 600

Query: 2073 EIHARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVD 2252
             IH++LNDL+IDG+QELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKIA+LTGL+VD
Sbjct: 601  AIHSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVD 660

Query: 2253 SAIGRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACAS 2432
             AIG+HFL LVEDSS   V KML LA+QGKEE+NVQFEIKTHG RSESGPISLIVNACAS
Sbjct: 661  EAIGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACAS 720

Query: 2433 RDVKESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEW 2612
            RDV+ESVVGVCFIAQDIT QK++MDKFTRIEGDYRAI+QNPNPLIPPIFGTDEFGWCSEW
Sbjct: 721  RDVQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEW 780

Query: 2613 NAAMTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIP 2792
            N+AMT LSGW RD+V+DKMLLGEVFG  KACCRLKNQEA+VNLG+VLNNA+TGQ S K  
Sbjct: 781  NSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTR 840

Query: 2793 FGFFSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLR 2972
            FGFF+RNGKYVECLL VSK+LD EGAVTGLFCF            H Q++SEQTA KRL+
Sbjct: 841  FGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLSEQTAMKRLK 900

Query: 2973 VLAYIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIE 3152
            VLAYIRR++KNPLSGI+FSRKM+EGT+L  +QK++L TS  CQ QL+K+LDDTDLD IIE
Sbjct: 901  VLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIE 960

Query: 3153 GYLDLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAA 3332
            GYLDLEMVEFKL EVL ASISQVM KSNGK + I++++  N+  ETLYGDSLRLQQ+L+ 
Sbjct: 961  GYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDSLRLQQILSE 1020

Query: 3333 FLLVSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEAD 3509
            FL V+VN TP GGQL +++ L K++ GES+QL HLEFR+TH GGGVP+ELL QMFG EAD
Sbjct: 1021 FLSVAVNFTPSGGQLALSSKLTKDNFGESIQLAHLEFRLTHTGGGVPEELLTQMFGSEAD 1080

Query: 3510 ASEDGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKANA 3650
            ASEDGISL ISRKLVKLMNGDVQYLREAGRS+FIISVELA+++K ++
Sbjct: 1081 ASEDGISLLISRKLVKLMNGDVQYLREAGRSTFIISVELAVASKPSS 1127


>gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]
          Length = 1127

 Score = 1810 bits (4689), Expect = 0.0
 Identities = 902/1127 (80%), Positives = 1002/1127 (88%), Gaps = 6/1127 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MS+++P QSS+NSARS+HSARIIAQTSIDAKLHA              VRVT+V  G  +
Sbjct: 1    MSTSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQK 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLHQIQK K+IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFT+PSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLI+
Sbjct: 121  PVLGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIV 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
            IYKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+V
Sbjct: 241  IYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQHP--EK 1361
            VQD  L++DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+             +    +K
Sbjct: 301  VQDEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGI+SQSPN+MDL+KCDGA LL+KSK +R+G+TP+DFQ++DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGILSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLQDIVSWLSEYHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGF GALALGDA+CGMA+VRI+D DWLFWFRSHTAAE+RWGGAKHEP E
Sbjct: 481  STGLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGAKHEPDE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEGEDKDL--DGR 2072
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF KE +  D   +  
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANAN 600

Query: 2073 EIHARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVD 2252
             IH++LNDL+IDG+QELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKIA+LTGL+VD
Sbjct: 601  AIHSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVD 660

Query: 2253 SAIGRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACAS 2432
             AIG+HFL LVEDSS   V KML LA+QGKEE+NVQFEIKTHG RSESGPISLIVNACAS
Sbjct: 661  EAIGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACAS 720

Query: 2433 RDVKESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEW 2612
            RDV+ESVVGVC IAQDIT QK++MDKFTRIEGDYRAI+QNPNPLIPPIFGTDEFGWCSEW
Sbjct: 721  RDVQESVVGVCLIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEW 780

Query: 2613 NAAMTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIP 2792
            N+AMT LSGW RD+V+DKMLLGEVFG  KACCRLKNQEA+VNLG+VLNNA+TGQ S K  
Sbjct: 781  NSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTR 840

Query: 2793 FGFFSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLR 2972
            FGFF+RNGKYVECLL VSK+LD EGAVTGLFCF            H Q++SEQTA KRL+
Sbjct: 841  FGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLSEQTAMKRLK 900

Query: 2973 VLAYIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIE 3152
            VLAYIRR++KNPLSGI+FSRKM+EGT+L  +QK++L TS  CQ QL+K+LDDTDLD IIE
Sbjct: 901  VLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIE 960

Query: 3153 GYLDLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAA 3332
            GYLDLEMVEFKL EVL ASISQVM KSNGK + I++++  N+  ETLYGDSLRLQQ+L+ 
Sbjct: 961  GYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDSLRLQQILSE 1020

Query: 3333 FLLVSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEAD 3509
            FL V+VN TP GGQL +++ L K+++GES+QL HLEFR+TH GGGVP+ELL QMFG EAD
Sbjct: 1021 FLSVAVNFTPSGGQLALSSKLTKDNLGESIQLAHLEFRLTHTGGGVPEELLTQMFGSEAD 1080

Query: 3510 ASEDGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKANA 3650
            ASEDGISL ISRKLVKLMNGDVQYLREAGRS+FIISVELA+++K ++
Sbjct: 1081 ASEDGISLLISRKLVKLMNGDVQYLREAGRSTFIISVELAVASKPSS 1127


>gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]
          Length = 1127

 Score = 1808 bits (4682), Expect = 0.0
 Identities = 900/1127 (79%), Positives = 1000/1127 (88%), Gaps = 6/1127 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MS+++P QSS+NSARS+HSARIIAQTSIDAKLHA              VRVT+V  G  +
Sbjct: 1    MSTSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQK 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLHQIQK K+IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFT+PSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLI+
Sbjct: 121  PVLGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIV 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
            IYKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+V
Sbjct: 241  IYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQHP--EK 1361
            VQD  L++DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+             +    +K
Sbjct: 301  VQDEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGL+VCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLIVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPN+MDL+KCDGA LL+KSK +R+G+TP+DFQ+ DIVSWL EYH D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLHDIVSWLSEYHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGF GALALGDA+CGMA+VRI+D DWLFWFRSHTAAE+RWGG KHEP E
Sbjct: 481  STGLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGEKHEPDE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEGEDKDL--DGR 2072
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF KE +  D   +  
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANAN 600

Query: 2073 EIHARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVD 2252
             IH++LNDL+IDG+QELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKIA+LTGL+VD
Sbjct: 601  AIHSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVD 660

Query: 2253 SAIGRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACAS 2432
             AIG+HFL LVEDSS   V KML LA+QGKEE+NVQFEIKTHG RSESGPISLIVNACAS
Sbjct: 661  EAIGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACAS 720

Query: 2433 RDVKESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEW 2612
            RDV+ESVVGVCFIAQDIT QK++MDKFTRIEGDYRAI+QNPNPLIPPIFGTDEFGWCSEW
Sbjct: 721  RDVQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEW 780

Query: 2613 NAAMTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIP 2792
            N+AMT LSGW RD+V+DKMLLGEVFG  KACCRLKNQEA+VNLG+VLNNA+TGQ S K  
Sbjct: 781  NSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTR 840

Query: 2793 FGFFSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLR 2972
            FGFF+RNGKYVECLL VSK+LD EGAVTGLFCF              Q++SEQTA KRL+
Sbjct: 841  FGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALRFQKLSEQTAMKRLK 900

Query: 2973 VLAYIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIE 3152
            VLAYIRR++KNPLSGI+FSRKM+EGT+L  +QK++L TS  CQ QL+K+LDDTDLD IIE
Sbjct: 901  VLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIE 960

Query: 3153 GYLDLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAA 3332
            GYLDLEMVEFKL EVL ASISQVM KSNGK + I++++  N+  ETLYGDSLRLQQ+L+ 
Sbjct: 961  GYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDSLRLQQILSE 1020

Query: 3333 FLLVSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEAD 3509
            FL V+VN TP GGQL +++ L K+++GES+QL HLEFR+TH GGGVP+ELL QMFG EAD
Sbjct: 1021 FLSVAVNFTPSGGQLALSSKLTKDNLGESIQLAHLEFRLTHTGGGVPEELLTQMFGSEAD 1080

Query: 3510 ASEDGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKANA 3650
            ASEDGISL ISRKLVKLMNGD+QYLREAGRS+FIISVELA+++K ++
Sbjct: 1081 ASEDGISLLISRKLVKLMNGDIQYLREAGRSTFIISVELAVASKPSS 1127


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1770 bits (4584), Expect = 0.0
 Identities = 882/1121 (78%), Positives = 981/1121 (87%), Gaps = 3/1121 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSS+ S RS+HSARIIAQT++DAKLHA              VR T  A G+ +
Sbjct: 1    MSSSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTP-AGGDQQ 59

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLH IQKGK IQPFG LLALDEKTF+VIAYSENAPEMLTMVSHAVPSVG+H
Sbjct: 60   PRSDKVTTAYLHHIQKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEH 119

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG+++RTIF+ PSA+AL KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII
Sbjct: 120  PVLGIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 179

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM
Sbjct: 180  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVM 239

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA H++V
Sbjct: 240  AYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQV 299

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQ--HPEK 1361
            +QD  L  DLTLCGSTLRAPHSCH+QYMENMNSIASLVM+                 P+K
Sbjct: 300  LQDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQK 359

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+ EKNILRTQTLLC
Sbjct: 360  RKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLC 419

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPNVMDLVKCDGA LLYK+K +R+G+TPSDFQ+ DI SWL EYH D
Sbjct: 420  DMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMD 479

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAG+PGALALGDAVCGMAAV+IT  D LFWFRSHTAAE+RWGGAKHEPGE
Sbjct: 480  STGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGE 539

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ E  D++   IH
Sbjct: 540  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIH 599

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +LNDL+I+G+QELEAVTSEMVRLIETASVPI AVDVDGLVNGWNTKI++LT L VD AI
Sbjct: 600  TKLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAI 659

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G H L LVEDSSADTV KML LA+QG+EE+NVQFEIKTHG + +SGPISL+VNACASRD+
Sbjct: 660  GMHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDL 719

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             E+VVGVCF+AQDIT+QK++MDKFTRIEGDY+AIVQNPNPLIPPIFGTDEFGWCSEWN A
Sbjct: 720  HENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA 779

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            M KLSGW R++V+DKMLLGEVFG + ACCRLKN+EA+V LGIVLN+ +TG+ES K+ FGF
Sbjct: 780  MVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGF 839

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            FS++GKYVECLL VSKKLD EGAVTG+FCF            H+QR+SEQTA KRL+ LA
Sbjct: 840  FSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALA 899

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YI+R+IKNPLSGIIFSRKMME TDL +EQ+ +L TS  CQ QL+KILDD DLD IIEGYL
Sbjct: 900  YIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYL 959

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF L EVL+ASISQVM+KSNGKGI IV++ +  +  ETLYGD LRLQQVLA FLL
Sbjct: 960  DLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLL 1019

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            +SVN TP GGQL VAA+L K+ +GESV L HLE RITH G GVP++LLNQMFG+  DASE
Sbjct: 1020 ISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASE 1079

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNK 3641
            +GISL ISRKLVKLMNGDVQYLREAG+S+FIIS+ELA + K
Sbjct: 1080 EGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARK 1120


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1769 bits (4581), Expect = 0.0
 Identities = 881/1121 (78%), Positives = 981/1121 (87%), Gaps = 3/1121 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSS+ S RS+HSARIIAQT++DAKLHA              VR T  A G+ +
Sbjct: 1    MSSSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTP-AGGDQQ 59

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLH IQKGK IQPFG LLALD+KTF+VIAYSENAPEMLTMVSHAVPSVG+H
Sbjct: 60   PRSDKVTTAYLHHIQKGKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEH 119

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG+++RTIF+ PSA+AL KALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII
Sbjct: 120  PVLGIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 179

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM
Sbjct: 180  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVM 239

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA H++V
Sbjct: 240  AYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQV 299

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQ--HPEK 1361
            +QD  L  DLTLCGSTLRAPHSCH+QYMENMNSIASLVM+                 P+K
Sbjct: 300  LQDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQK 359

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCH+TTPRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+ EKNILRTQTLLC
Sbjct: 360  RKRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLC 419

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPNVMDLVKCDGA LLYK+K +R+G+TPSDFQ+ DI SWL EYH D
Sbjct: 420  DMLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMD 479

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAG+PGALALGDAVCGMAAV+IT  D LFWFRSHTAAE+RWGGAKHEPGE
Sbjct: 480  STGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGE 539

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ E  D++   IH
Sbjct: 540  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIH 599

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +LNDL+I+G+QELEAVTSEMVRLIETASVPI AVDVDGLVNGWNTKI++LT L VD AI
Sbjct: 600  TKLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAI 659

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G H L LVEDSSADTV KML LA+QG+EE+NVQFEIKTHG + +SGPISL+VNACASRD+
Sbjct: 660  GMHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDL 719

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             E+VVGVCF+AQDIT+QK++MDKFTRIEGDY+AIVQNPNPLIPPIFGTDEFGWCSEWN A
Sbjct: 720  DENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA 779

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            M KLSGW R++V+DKMLLGEVFG + ACCRLKN+EA+V LGIVLN+ +TG+ES K+ FGF
Sbjct: 780  MVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGF 839

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            FS++GKYVECLL VSKKLD EGAVTG+FCF            H+QR+SEQTA KRL+ LA
Sbjct: 840  FSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALA 899

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YI+R+IKNPLSGIIFSRKMME TDL +EQ+ +L TS  CQ QL+KILDD DLD IIEGYL
Sbjct: 900  YIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYL 959

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF L EVL+ASISQVM+KSNGKGI IV++ +  +  ETLYGD LRLQQVLA FLL
Sbjct: 960  DLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLL 1019

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            +SVN TP GGQL VAA+L K+ +GESV L HLE RITH G GVP++LLNQMFG+  DASE
Sbjct: 1020 ISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASE 1079

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNK 3641
            +GISL ISRKLVKLMNGDVQYLREAG+S+FIIS+ELA + K
Sbjct: 1080 EGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARK 1120


>gb|EOY11803.1| Phytochrome A [Theobroma cacao]
          Length = 1121

 Score = 1766 bits (4573), Expect = 0.0
 Identities = 874/1123 (77%), Positives = 985/1123 (87%), Gaps = 4/1123 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P  SS+NS RSRHSARIIAQT++DAKLHA              VRV+    G+ +
Sbjct: 1    MSSSRPSHSSSNSGRSRHSARIIAQTTVDAKLHANFEESGSSFDYSSSVRVS----GDQQ 56

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSD+VTTAYLHQIQKGKFIQPFGCLLALDEKT++VIAYSENAPEMLTMVSHAVPSVGDH
Sbjct: 57   PRSDRVTTAYLHQIQKGKFIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDH 116

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++I+TIFTAPS++AL KALG GEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII
Sbjct: 117  PVLGIGTDIKTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 176

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 177  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 236

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMI DC A HVKV
Sbjct: 237  AYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKV 296

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX---DEQHPE 1358
             QD  L  DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+                Q  +
Sbjct: 297  FQDDKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGDGPDSAQPQQ 356

Query: 1359 KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLL 1538
            KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKE+ELENQ+ EKNILRTQTLL
Sbjct: 357  KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELENQIIEKNILRTQTLL 416

Query: 1539 CDMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHR 1718
            CDMLLRDAP+GI+SQSPN+MDLVKCDGA LLYK+K +++G+TPSDFQ+ +I SWL EYH 
Sbjct: 417  CDMLLRDAPMGIISQSPNIMDLVKCDGAALLYKNKIWKLGVTPSDFQLHEIASWLSEYHM 476

Query: 1719 DSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPG 1898
            DSTGLSTDSLYDAGFPGALALGD VCGMAAVRIT  D LFWFRSHTAAEIRWGGAKHEPG
Sbjct: 477  DSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITLKDMLFWFRSHTAAEIRWGGAKHEPG 536

Query: 1899 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREI 2078
            EKD+GRKMHPRSSFKAFL+VVKTRS+PWKDYEMDAIHSLQLILRNAFK+ E  D +   I
Sbjct: 537  EKDNGRKMHPRSSFKAFLQVVKTRSMPWKDYEMDAIHSLQLILRNAFKDVETTDTNTSAI 596

Query: 2079 HARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSA 2258
            H++L+DL+I+G+QELEAVTSEMVRLIETA+VPI AVDVDGLVNGWN KIA+LTGL VD A
Sbjct: 597  HSKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNMKIAELTGLPVDKA 656

Query: 2259 IGRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRD 2438
            IG+H L LVEDSS +TV +ML LA+QGKEE+N+QFEIKTHG R E+GPISL+VNACA+RD
Sbjct: 657  IGKHLLTLVEDSSVETVKQMLVLALQGKEEKNIQFEIKTHGSRIEAGPISLVVNACANRD 716

Query: 2439 VKESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNA 2618
            + E+VVGVCF+AQDIT QK +MDKFTRIEGDY+AIVQNPNPLIPPIFG DEFGWCSEWN 
Sbjct: 717  LHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGMDEFGWCSEWNP 776

Query: 2619 AMTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFG 2798
            AMTKL+GW+RD+V+DKMLLGEVFG + ACCRLK+Q+++VNLG+VLNNA+TG E  K+PFG
Sbjct: 777  AMTKLTGWKRDEVVDKMLLGEVFGTHIACCRLKSQDSFVNLGVVLNNAMTGHEPEKVPFG 836

Query: 2799 FFSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVL 2978
            FF+R+GKYVECLLCV+KKLD E AVTG+FCF            HVQR+SEQTA KRL+ L
Sbjct: 837  FFARSGKYVECLLCVNKKLDREDAVTGVFCFLQLASHELQQALHVQRLSEQTAMKRLKAL 896

Query: 2979 AYIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGY 3158
            AY++R+I+NPLSGIIFSRKMMEGT+L  EQK LL+TS  CQ QL+KILDD+DLD II+GY
Sbjct: 897  AYLKRQIRNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQRQLSKILDDSDLDSIIDGY 956

Query: 3159 LDLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFL 3338
            LDLEM++F LHEVL+ASISQVMMKSNGKGI IV++ +  +  ETLYGDS+RLQQVLA FL
Sbjct: 957  LDLEMIDFTLHEVLVASISQVMMKSNGKGIRIVNDTEEEVMTETLYGDSVRLQQVLADFL 1016

Query: 3339 LVSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADAS 3515
            L+SVN TP GGQL V A+L K+ +G+SV L HLE RITH GGGVP+ LL+QMFG + DAS
Sbjct: 1017 LISVNFTPNGGQLVVVASLTKDQLGQSVHLAHLELRITHAGGGVPEALLSQMFGSDGDAS 1076

Query: 3516 EDGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKA 3644
            E+GISL ISRKLVKLMNGD+QYLREAGRS+FI++VELA +N++
Sbjct: 1077 EEGISLLISRKLVKLMNGDIQYLREAGRSTFIVTVELAAANRS 1119


>ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citrus clementina]
            gi|568853345|ref|XP_006480323.1| PREDICTED: phytochrome
            A-like [Citrus sinensis] gi|557525879|gb|ESR37185.1|
            hypothetical protein CICLE_v10027712mg [Citrus
            clementina]
          Length = 1117

 Score = 1750 bits (4532), Expect = 0.0
 Identities = 864/1118 (77%), Positives = 977/1118 (87%), Gaps = 1/1118 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSS+N+ +SRHSAR+IAQT+IDAKLHA              VRV++ A G+ +
Sbjct: 1    MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSD+VTTAYLH IQKGK IQPFGCLLALDEKTF+VIAYSENAPE+LTMV+HAVPSVGDH
Sbjct: 61   PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIGS+I+TIFTAPSA+ALQKALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121  PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTM+QEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFH+DDHGEV +EITK GLEPY GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV
Sbjct: 241  AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQHPEKRK 1367
            +QD  L  DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+           D   P+KRK
Sbjct: 301  LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEG-DNTLPQKRK 359

Query: 1368 RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLCDM 1547
            RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE Q+ EKNILRTQTLLCDM
Sbjct: 360  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDM 419

Query: 1548 LLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRDST 1727
            L+RDAPLGIV+QSPN+MDLVKCDGA LLYK+K +R+G+TP+DFQ+ DIVSWL EYH DST
Sbjct: 420  LMRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDST 479

Query: 1728 GLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGEKD 1907
            GLS DSLYDAG+PGALALGD VCGMAAVRI+  D +FWFRS TA+E+RWGGAKHEP EKD
Sbjct: 480  GLSADSLYDAGYPGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKD 539

Query: 1908 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIHAR 2087
            DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+    DLD + IH++
Sbjct: 540  DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSK 599

Query: 2088 LNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAIGR 2267
            L DL+I+G++ELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKIA+LTGLSVD AIG+
Sbjct: 600  LCDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGK 659

Query: 2268 HFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDVKE 2447
            HFL LVEDSS DTV +ML LA+QG+EE+N+QFEIKTHG +    PI+LIVNACASRD+ +
Sbjct: 660  HFLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHD 719

Query: 2448 SVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAAMT 2627
            +VVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIPPIFG+DEFGWC EWN AM 
Sbjct: 720  NVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMV 779

Query: 2628 KLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGFFS 2807
            KL+GW+R++VIDK+LL EVFG N ACCRLKNQEA+VNLGIVLN A++GQ+  K+PFGFF+
Sbjct: 780  KLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFA 839

Query: 2808 RNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLAYI 2987
            RNGKY ECLLCV+KKLD EGAVTG+FCF            HVQR+SEQTA KRL+ LAY 
Sbjct: 840  RNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYT 899

Query: 2988 RREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYLDL 3167
            +R+I+NPLSGIIFSRKMMEGT+L  EQK LL TS  CQ QL+KILDD+DLD II+GYLDL
Sbjct: 900  KRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDL 959

Query: 3168 EMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLLVS 3347
            EMVEF L+EVL+ASISQVMMKSN KGI IV+     + +ETLYGDS+RLQQVLA FL +S
Sbjct: 960  EMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSIS 1019

Query: 3348 VNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASEDG 3524
            +N  P GGQL V+++L K+ +G SV L +LE RITH GGG+P+ LL+QMFG E D SE+G
Sbjct: 1020 INFVPNGGQLMVSSSLTKDQLGRSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEG 1079

Query: 3525 ISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISN 3638
            ISL ISRKLVKLMNGDVQYLREAG+S+FI+SVELA ++
Sbjct: 1080 ISLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH 1117


>gb|EXB57569.1| Phytochrome type A [Morus notabilis]
          Length = 1130

 Score = 1748 bits (4528), Expect = 0.0
 Identities = 859/1124 (76%), Positives = 972/1124 (86%), Gaps = 3/1124 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MS+++P  SS+NS RSRHSARI+AQT++DAKLHA              +RV+N  + + +
Sbjct: 1    MSTSRPSHSSSNSGRSRHSARIVAQTTVDAKLHAEFEETGSSFDYSSSIRVSNSTSADQQ 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLH IQKGK IQPFGCLLALDEKT +VIAYSENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTLKVIAYSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG+++RTIFTAPSA+ALQKALGFG+VSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121  PVLGIGTDVRTIFTAPSASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFH+DDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMI DC A HVKV
Sbjct: 241  AYKFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
             QD  L  DLTLCGSTLRAPHSCHLQYM+NMNSIASLVM+             +   P+K
Sbjct: 301  FQDEKLPFDLTLCGSTLRAPHSCHLQYMDNMNSIASLVMAVVVNEGDDDDDSPNSSQPQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIVSQSPN+MDLVKCDGA LLY++K +R+G+ PSD Q+ DIV WL E+H D
Sbjct: 421  DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYRNKVWRLGIAPSDSQLHDIVLWLSEHHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAG+PGA AL D +CGMAAVRIT  D +FWFRSHTAAEI+WGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGYPGAHALDDVICGMAAVRITSKDMIFWFRSHTAAEIQWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRS PWKDYEMDAIHSLQLILRNAFK+ E  D +   I+
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSFPWKDYEMDAIHSLQLILRNAFKDTEALDSNTMTIN 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             RL DL+ +G+QELEAVTSEMVRLIETA+VPI AVD+DG+VNGWNTKI+DLTGL V+ AI
Sbjct: 601  TRLTDLKFEGMQELEAVTSEMVRLIETATVPILAVDIDGVVNGWNTKISDLTGLPVEQAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G H L LVEDSS + V  MLELA+QGKEERN+QFEIKTHG RS+SGPISL+VNACASRD+
Sbjct: 661  GAHLLTLVEDSSTEVVRVMLELALQGKEERNIQFEIKTHGSRSDSGPISLVVNACASRDL 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
              +VVGVCF+AQD+T QK+MMDKFTRIEGDY+AIVQN NPLIPPIFG DEFGWCSEWN A
Sbjct: 721  NGNVVGVCFVAQDLTAQKTMMDKFTRIEGDYKAIVQNRNPLIPPIFGADEFGWCSEWNPA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MTK++GW+R++VIDKMLLGEVFG++  CCRLKNQEA+VNLG+VLNNA+TGQES K+PFGF
Sbjct: 781  MTKITGWKREEVIDKMLLGEVFGVSMTCCRLKNQEAFVNLGVVLNNAMTGQESEKVPFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+RNGKY+ECLLCVSKKLD +GAVTG+FCF            HVQR+ EQ A+KRL+ LA
Sbjct: 841  FARNGKYIECLLCVSKKLDRDGAVTGVFCFLQLASLELQQALHVQRLMEQIATKRLKALA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YI+R+I+NPLSGIIFSRKMMEGT+L  EQK LL TS  CQ QL+KILDD+DLD+IIEGY 
Sbjct: 901  YIKRQIRNPLSGIIFSRKMMEGTELGLEQKQLLHTSAQCQRQLSKILDDSDLDNIIEGYS 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF LHE+L+A+ SQVMMK   KGI +V++     +N+TLYGDSLRLQQVLA FLL
Sbjct: 961  DLEMVEFTLHEILVAATSQVMMKIKAKGIRLVEDASEETTNDTLYGDSLRLQQVLADFLL 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            +SVN TP GGQ+ +AA L K+ +GESV L  LE R+TH G G+P+ LLNQMFG + D SE
Sbjct: 1021 ISVNFTPNGGQIVIAANLTKDHLGESVHLVRLELRLTHTGSGIPESLLNQMFGTDGDVSE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKANA 3650
            +GISL ISRKLVKLMNGDVQYL+EAG+S+FIISVELA ++K+ A
Sbjct: 1081 EGISLLISRKLVKLMNGDVQYLKEAGKSTFIISVELAAAHKSRA 1124


>ref|XP_002318913.1| phytochrome A family protein [Populus trichocarpa]
            gi|222857289|gb|EEE94836.1| phytochrome A family protein
            [Populus trichocarpa]
          Length = 1126

 Score = 1747 bits (4525), Expect = 0.0
 Identities = 867/1122 (77%), Positives = 973/1122 (86%), Gaps = 3/1122 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P  SS+NSARSRHSARIIAQT++DAKLHA              VRVT+   G+  
Sbjct: 1    MSSSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQP 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTT YLH IQKGK IQPFGCLLALDEKTF+V+AYSENAPE+LTMVSHAVPSVG+H
Sbjct: 61   PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFTAPSA+ALQKA+GFG+VSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121  PVLGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR M
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +E+TKPG+EPY GLHYPATDIPQA+RFLFMKNKVRMI DC A HVKV
Sbjct: 241  AYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            +QD  L  DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+             D  +P+K
Sbjct: 301  LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIV+QSPN+MDLVKCDGAVL Y++K +R+G+TPSD Q++DI  WL EYH D
Sbjct: 421  DMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAG+PGALALGD VCGMAAVRIT  D LFWFRS TAAEIRWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ E  D+D + IH
Sbjct: 541  KDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIH 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
            ARL+DL+I+G+QELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKI++LTGL VD AI
Sbjct: 601  ARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G+H L LVEDSS D V +ML LA+QGKEE+N+QFEIKTHG +SE GPI L+VNACASRD+
Sbjct: 661  GKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDL 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             E+VVGVCF+ QDIT QK +MDKFTRIEGDY+AIVQN NPLIPPIFGTDEFGWCSEWN A
Sbjct: 721  HENVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MT L+GW+R++V+DKMLLGEVFG+N ACCRLKNQEA+VNLG+VLN A+TGQES K+ FGF
Sbjct: 781  MTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+R GKYVECLLCVSKKLD EGAVTG+FCF            HVQR+SEQTA KRL+ LA
Sbjct: 841  FARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            Y++R+I NPLSGIIFS KMMEGT+L  EQK LL TS  CQ QL+KILDD+DLD IIEGYL
Sbjct: 901  YLKRQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF L EVL+A+ SQVMMKSN KGI I+++       ETLYGDS+RLQQVLA FL 
Sbjct: 961  DLEMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQVLADFLQ 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            +SVN TP GG L V+A+L K+ +G+SV L HLE RI H G G+P+ LL+QMFG++ DAS 
Sbjct: 1021 MSVNFTPSGGLLSVSASLTKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMFGEDTDASV 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKA 3644
            +GISL ISRKLVKLMNGDV+Y+REAG+SSFIISVELA  +K+
Sbjct: 1081 EGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAGGHKS 1122


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score = 1739 bits (4504), Expect = 0.0
 Identities = 862/1124 (76%), Positives = 968/1124 (86%), Gaps = 3/1124 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P  SS+NS RSRHSARII+QT++DAKLHA              V VT+    +  
Sbjct: 1    MSSSRPSHSSSNSVRSRHSARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHA 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLH IQKGK IQPFGCLLALDEKT++VIAYSENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFTAPSA+ALQKALGFG+VSLLNPILVHCKTSGKPFYAI+HRVTGS II
Sbjct: 121  PVLGIGTDIRTIFTAPSASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAI+RLQSLPSGSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +E+TKPGLEPY GLHYPATDIPQAARFLFMKNKVRMI DCRA HVKV
Sbjct: 241  TYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQ--HPEK 1361
            +QD  L L+LTLCGSTLRAPHSCHLQYMENM+S+ASLVM+                 P+K
Sbjct: 301  LQDEKLPLELTLCGSTLRAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DMLLRDAPLGI++QSPN+ DLVKCDGA LLYK+K +R+G+TPSD QIRDI  WL EYH D
Sbjct: 421  DMLLRDAPLGILTQSPNITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAG+  AL+L D VCGMAAVRIT  D LFWFR+ TAAEIRWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGYSAALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ E  D D + IH
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIH 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
            +RL+DL+I+G+QELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKIA+LTGL VD AI
Sbjct: 601  SRLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G+H L LVED S D V  ML  A+QGKEE+N+QFEIKTHG + ESGPISL+VNACASRD+
Sbjct: 661  GKHLLTLVEDGSIDLVKNMLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDI 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             E+VVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIPPIFGTDEFGWCSEWN A
Sbjct: 721  SENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            M KL+GW+R++V+DKMLLGEVFGIN+ACC LKNQEA+VNLG+++NNA+T Q   K+ F F
Sbjct: 781  MAKLTGWKREEVMDKMLLGEVFGINRACCCLKNQEAFVNLGVLINNAMTSQVPEKVSFSF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+RN KYVECLLCVSKKLD EGAVTG+FCF            H+QR+SEQTA KRL+ LA
Sbjct: 841  FARNKKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKTLA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YI+R+I+NPLSGI+FSRK+ME T+LD EQK LL TS  CQ QL+KILDD+D+D I+EGYL
Sbjct: 901  YIKRQIQNPLSGIMFSRKLMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVEGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF LHEVLIA+ISQV +KS GKGI IV++    +  ETLYGDS+RLQQVLA FL 
Sbjct: 961  DLEMVEFTLHEVLIAAISQVTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLADFLA 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
             SV+ TP GGQL +AA   K+ +G+SV L HLE RITH GGG+P+ LLNQMFG + D S+
Sbjct: 1021 ASVDFTPPGGQLTIAAKFTKDQLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGDVSD 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKANA 3650
            +G+SLFISRKLVKLMNGDVQYLREAG+SSFI++VELA   K+ A
Sbjct: 1081 EGVSLFISRKLVKLMNGDVQYLREAGKSSFIVTVELAAGRKSQA 1124


>gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
          Length = 1119

 Score = 1737 bits (4499), Expect = 0.0
 Identities = 872/1125 (77%), Positives = 980/1125 (87%), Gaps = 4/1125 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P QSS+NSARS+HSARIIAQTSIDAKLHA              +RVT+V TGE +
Sbjct: 1    MSSSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSIRVTSVNTGEQK 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLHQIQK KFIQPFGCLLALDEKTFRVIA+SENAP+MLTMVSHAVPSVGD 
Sbjct: 61   PRSDKVTTAYLHQIQKAKFIQPFGCLLALDEKTFRVIAFSENAPDMLTMVSHAVPSVGDL 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFTAPS AALQKALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLI+
Sbjct: 121  PVLGIGTDIRTIFTAPSGAALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIV 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+E PMTAAGALQSYKLAAKAI RLQSLPSGS+ER CDT+VQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEAPMTAAGALQSYKLAAKAIARLQSLPSGSLERFCDTIVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +EITKPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDC+A HVKV
Sbjct: 241  AYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCQAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXXDEQHPE-KR 1364
            VQD  L  DLTLCGSTLRAPH+CHLQYMENMNSIASLVM+           +E+    KR
Sbjct: 301  VQDEKLLFDLTLCGSTLRAPHTCHLQYMENMNSIASLVMAIVVNDGDDEEEEERSGSGKR 360

Query: 1365 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLCD 1544
            KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLCD
Sbjct: 361  KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCD 420

Query: 1545 MLLRDAPLGIVSQS--PNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHR 1718
            +LLRDA LGIVSQS  PN+MDLVKCDGAVLLYKSK +R+G+TP+DFQ++DIV  L+E+H 
Sbjct: 421  ILLRDAVLGIVSQSQSPNMMDLVKCDGAVLLYKSKIHRLGITPTDFQLQDIVYRLNEHHM 480

Query: 1719 DSTGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPG 1898
            DSTGLSTDSLYDAGFPGAL+LG  +CGMA+VRI++ DWLFWFRSHTA+E+RWGG KHEP 
Sbjct: 481  DSTGLSTDSLYDAGFPGALSLG--LCGMASVRISEKDWLFWFRSHTASEVRWGGVKHEP- 537

Query: 1899 EKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREI 2078
              DDGRKMHPRSSFKAFLEVV+TRSLPWKDYEMD IHSLQLI+RNAF    D  +    I
Sbjct: 538  --DDGRKMHPRSSFKAFLEVVETRSLPWKDYEMDGIHSLQLIMRNAFFNEADT-VATNVI 594

Query: 2079 HARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSA 2258
            HA+LNDL+IDG+QELEAVTSEMVRLIETA VPI AV VDGLVNGWNTKIA+LTGLSVD A
Sbjct: 595  HAKLNDLRIDGLQELEAVTSEMVRLIETAMVPIIAVGVDGLVNGWNTKIAELTGLSVDEA 654

Query: 2259 IGRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRD 2438
            IG H L LVEDSS  TV KML LA+QG+EE+NVQFEI THG RSE GPISL+VNACASRD
Sbjct: 655  IGNHLLTLVEDSSVHTVKKMLNLALQGEEEKNVQFEIMTHGIRSECGPISLVVNACASRD 714

Query: 2439 VKESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNA 2618
            V+ESVVGVCFIAQDIT QK++MDKFTRIEGDYRAI+QNPNPLIPPIFGTDEFGWCSEWN+
Sbjct: 715  VQESVVGVCFIAQDITGQKTVMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNS 774

Query: 2619 AMTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFG 2798
            AMTKLSGWRRD+VIDKM+LGEVFG  KACCRLK+ EA+V LG+VLNNA+TG ES K  FG
Sbjct: 775  AMTKLSGWRRDEVIDKMVLGEVFGTQKACCRLKSHEAFVTLGVVLNNAITGHESDKTVFG 834

Query: 2799 FFSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVL 2978
            F +RNGKYVECLL V+K+L+ +GAV GLFCF            H Q++SEQTA+KRL+VL
Sbjct: 835  FCTRNGKYVECLLSVTKRLNQDGAVIGLFCFLQLASQELQQALHFQKLSEQTATKRLKVL 894

Query: 2979 AYIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGY 3158
            AY+R+++KNPLSGI+FSRKM+EGT+L ++Q+N+L TS  CQ QL+K+LDDTDLD IIEGY
Sbjct: 895  AYLRKQVKNPLSGIMFSRKMLEGTELGNDQQNILHTSAQCQQQLSKVLDDTDLDCIIEGY 954

Query: 3159 LDLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFL 3338
            LDLEMVEFKL EVL+ASISQVM KSNGK + +++++  N+  ETLYGDSLRLQQVLA FL
Sbjct: 955  LDLEMVEFKLDEVLLASISQVMTKSNGKSLRVINDVAENVLCETLYGDSLRLQQVLAEFL 1014

Query: 3339 LVSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADAS 3515
             V+VN TP GGQL V+++L K+ +G+SVQL HLEFR+TH GGGVP+ELL QMFG + DA 
Sbjct: 1015 SVAVNFTPSGGQLAVSSSLTKDHLGQSVQLAHLEFRVTHSGGGVPEELLTQMFGSDVDAL 1074

Query: 3516 EDGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISNKANA 3650
            E+GISL +SR LVKLMNGDVQY REAGRS+FIISVELA++ K  A
Sbjct: 1075 EEGISLLVSRNLVKLMNGDVQYHREAGRSAFIISVELAVATKPRA 1119


>gb|AEK26583.1| phytochrome A [Populus tremula]
          Length = 1109

 Score = 1731 bits (4482), Expect = 0.0
 Identities = 856/1109 (77%), Positives = 963/1109 (86%), Gaps = 3/1109 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P  SS+NSARSRHSARIIAQT++DAKLHA              VRVT+   G+  
Sbjct: 1    MSSSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQP 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLH IQKGK IQPFGCLLALDEKTFRV+AYSENAPE+LTMVSHAVPSVG+H
Sbjct: 61   PRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG++IRTIFTAPSA+ALQKA+GFG+VSLLNPILVHCKTSGKPFYAI+HRVTGSLII
Sbjct: 121  PVLGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDR M
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV +E+TKPG+EPY GLHYPATDIPQA+RFLFMKNKVRMI DC A HVKV
Sbjct: 241  AYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            +QD  L  DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+             D  +P+K
Sbjct: 301  LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNT+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ+ EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DML+RDAPLGIV+QSPN+MDLVKCDGAVL Y++K +R+G+TPSD Q++DI  WL EYH D
Sbjct: 421  DMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAG+PGALALGD VCGMAAVRIT  D LFWFRS TAAEIRWGGAKHEPGE
Sbjct: 481  STGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KDDGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRN FK+ E  D+D + IH
Sbjct: 541  KDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIH 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
            ARL+DL+I+G+QELEAVTSEMVRLIETA+VPI AVDVDGLVNGWNTKI++LTGL VD AI
Sbjct: 601  ARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G+H L LVEDSS D V +ML LA+QGKEE+N+QFEIKTHG +SE GPI L+VNACASRD+
Sbjct: 661  GKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDL 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             E+VVGVCF+ QDIT QK +MDKFTRIEGDY+AIVQN NPLIPPIFGTDEFGWCSEWN A
Sbjct: 721  HENVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MT L+GW+R++V+DKMLLGEVFG+N ACCRLKNQEA+VNLG+VLN A+TGQES K+ FGF
Sbjct: 781  MTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            F+R GKYVECLLCVSKKLD EGAVTG+FCF            HVQR+SEQTA KRL+ LA
Sbjct: 841  FARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            Y++++I NPLSGIIFS KMMEGT+L  EQK LL TS  CQ QL+KILDD+DLD IIEGYL
Sbjct: 901  YLKKQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF L EVL+A+ SQVMMKSN KGI I+++    +  ETLYGDS+RLQQVLA FLL
Sbjct: 961  DLEMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLADFLL 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            +SVN TP GG L V+A+ +K+ +G+SV L HLE RI H G G+P+ LL+QM+G++  AS 
Sbjct: 1021 MSVNFTPSGGLLTVSASFSKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMYGEDTGASV 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSS 3605
            +GISL ISRKLVKLMNGDV+Y+REAG+SS
Sbjct: 1081 EGISLVISRKLVKLMNGDVRYMREAGKSS 1109


>ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesca subsp. vesca]
          Length = 1124

 Score = 1728 bits (4475), Expect = 0.0
 Identities = 856/1120 (76%), Positives = 967/1120 (86%), Gaps = 3/1120 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P  SS+NS RSRHSAR+IAQT++DAKLHA              VRV++  TG+ +
Sbjct: 1    MSSSRPSHSSSNSGRSRHSARVIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQ 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLH IQKGK IQPFGCLLALD+KTFRVIAYSENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHHIQKGKLIQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG+++RTIFT PSA+AL KALGFGEVSLLNPILVHCK+SGKPFYAI+HRVTGSL+I
Sbjct: 121  PVLGIGTDVRTIFTGPSASALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVI 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV  E+TKPGLEPY GLHYP+TDIPQA+RFLFMKNKVRMI DC A +VKV
Sbjct: 241  AYKFHDDDHGEVVAELTKPGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            +QD  L LDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+             D    +K
Sbjct: 301  LQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINEGDDEVAGPDSAQTQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE+QM EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DMLLRDAPLGIVSQ+PN+MDLVKCDGA LLYK+K +R+GLTPSDFQI+DI  WL E H D
Sbjct: 421  DMLLRDAPLGIVSQTPNIMDLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGFPGALALGD VCGMAAV+IT  D +FWFRSHTAAEIRWGGAKH+P E
Sbjct: 481  STGLSTDSLYDAGFPGALALGDVVCGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KD+G KMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+  D D++   I 
Sbjct: 541  KDNGWKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGDMDVNNNGIQ 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +L+DL+IDG+QELEAVT EMVRLIETASVPI AVD++G VNGWNTKI++LTGL VD AI
Sbjct: 601  MQLSDLKIDGVQELEAVTGEMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G++ L LVE+SS   V +MLELA+QGKEE+N+QFEIKTHG R++ GPISL+VNACASRD+
Sbjct: 661  GKNLLTLVEESSTIMVGRMLELALQGKEEQNIQFEIKTHGARADFGPISLVVNACASRDI 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             E+VVGVCF+AQDIT QK++MDKFTRIEGDY+AIVQNPNPLIPPIFGTDEFGWCSEWN A
Sbjct: 721  HENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MTK +GW+R++V+DKMLLGEVFGI+ ACC LKNQEA+VNLG+V+N A+TG+ S K+PFGF
Sbjct: 781  MTKSTGWKREEVMDKMLLGEVFGIHMACCPLKNQEAFVNLGVVINRAMTGEVSEKVPFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            ++R GKY ECLLCVSKKLD EGAVTG+FCF            HVQR+SEQTA KR + LA
Sbjct: 841  WNRGGKYTECLLCVSKKLDSEGAVTGVFCFLQLASLELQQALHVQRLSEQTAVKRFKALA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YI+R+I+NPLSGI+FSRKM+EGT+L  EQK L+ TS  CQ QL+KILDD+DLD II+GYL
Sbjct: 901  YIKRQIRNPLSGILFSRKMIEGTELGAEQKQLIHTSAQCQQQLSKILDDSDLDSIIDGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF L EVL+ASISQVM+KS+ K I IV + +  +  ETLYGDSLRLQQVLA FL 
Sbjct: 961  DLEMVEFTLQEVLVASISQVMIKSSAKSIRIVQDANEEIMTETLYGDSLRLQQVLADFLS 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            VSVN  P GGQL +A  L K+ +G+SV L HLEFRI+H GGG+P+ LLNQMFG + D SE
Sbjct: 1021 VSVNYMPSGGQLTLATNLTKDQLGQSVHLAHLEFRISHAGGGIPEGLLNQMFGTDGDISE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISN 3638
            +GISL ISRKLVKLMNGDVQYLREAG+SSFIIS ELA ++
Sbjct: 1081 EGISLLISRKLVKLMNGDVQYLREAGKSSFIISAELAAAH 1120


>dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
          Length = 1124

 Score = 1722 bits (4459), Expect = 0.0
 Identities = 853/1120 (76%), Positives = 963/1120 (85%), Gaps = 3/1120 (0%)
 Frame = +3

Query: 288  MSSAQPGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVATGEPR 467
            MSS++P  SS+NS RSRHSAR+IAQT++DAKLHA              VRV++  TG+ +
Sbjct: 1    MSSSRPSHSSSNSGRSRHSARVIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQ 60

Query: 468  PRSDKVTTAYLHQIQKGKFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 647
            PRSDKVTTAYLH IQKGK IQPFGCLLALD+KTFRVIAYSENAPEMLTMVSHAVPSVGDH
Sbjct: 61   PRSDKVTTAYLHHIQKGKLIQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDH 120

Query: 648  PILGIGSEIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII 827
            P+LGIG+++RTIFT PSA+AL KALGFGEVSLLNPILVHCK+SGKPFYAI+HRVTGSL+I
Sbjct: 121  PVLGIGTDVRTIFTGPSASALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVI 180

Query: 828  DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVM 1007
            DFEPVKP+EVPMTAAGALQSYKLAAKAI RLQSLPSGS+ERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVM 240

Query: 1008 IYKFHDDDHGEVFTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 1187
             YKFHDDDHGEV  E+TK GLEPY GLHYP+TDIPQA+RFLFMKNKVRMI DC A +VKV
Sbjct: 241  AYKFHDDDHGEVVAELTKTGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKV 300

Query: 1188 VQDGNLALDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSXXXXXXXXXXX--DEQHPEK 1361
            +QD  L LDLTLCGSTLRAPHSCHLQYMENMNSIASLVM+             D    +K
Sbjct: 301  LQDEKLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINEGDYEVAGPDSAQTQK 360

Query: 1362 RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMTEKNILRTQTLLC 1541
            RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELE+QM EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEDQMIEKNILRTQTLLC 420

Query: 1542 DMLLRDAPLGIVSQSPNVMDLVKCDGAVLLYKSKKYRMGLTPSDFQIRDIVSWLDEYHRD 1721
            DMLLRDAPLGIVSQ+PN+MDLVKCDGA LLYK+K +R+GLTPSDFQI+DI  WL E H D
Sbjct: 421  DMLLRDAPLGIVSQTPNIMDLVKCDGAALLYKNKIWRLGLTPSDFQIQDISLWLSECHMD 480

Query: 1722 STGLSTDSLYDAGFPGALALGDAVCGMAAVRITDTDWLFWFRSHTAAEIRWGGAKHEPGE 1901
            STGLSTDSLYDAGFPGALALGD  CGMAAV+IT  D +FWFRSHTAAEIRWGGAKH+P E
Sbjct: 481  STGLSTDSLYDAGFPGALALGDVACGMAAVKITSKDIIFWFRSHTAAEIRWGGAKHDPDE 540

Query: 1902 KDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEGEDKDLDGREIH 2081
            KD+G KMHPRSSFKAFLEV KTRSLPWKDYEMDAIHSLQLILRNAFK+  D  ++   I 
Sbjct: 541  KDNGWKMHPRSSFKAFLEVAKTRSLPWKDYEMDAIHSLQLILRNAFKDVGDMAVNNNGIQ 600

Query: 2082 ARLNDLQIDGIQELEAVTSEMVRLIETASVPIFAVDVDGLVNGWNTKIADLTGLSVDSAI 2261
             +L+DL+IDG+QELEAVT EMVRLIETASVPI AVD++G VNGWNTKI++LTGL VD AI
Sbjct: 601  MQLSDLKIDGVQELEAVTGEMVRLIETASVPILAVDIEGSVNGWNTKISELTGLPVDKAI 660

Query: 2262 GRHFLALVEDSSADTVSKMLELAVQGKEERNVQFEIKTHGPRSESGPISLIVNACASRDV 2441
            G++ L LVE+SS   V +MLELA+QGKEE+N+QFEIKTHG R++ GPISL+VNACASRD+
Sbjct: 661  GKNLLTLVEESSTSMVGRMLELALQGKEEQNIQFEIKTHGARADFGPISLVVNACASRDI 720

Query: 2442 KESVVGVCFIAQDITTQKSMMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAA 2621
             E+VVGVCF+AQDIT QK +MDKFTRIEGDY+AIVQNPNPLIPPIFGTDEFGWCSEWN A
Sbjct: 721  HENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA 780

Query: 2622 MTKLSGWRRDDVIDKMLLGEVFGINKACCRLKNQEAYVNLGIVLNNAVTGQESGKIPFGF 2801
            MTKL+GW+R++V+DKMLLGEVFGI+ ACC LKNQEA+VNLG+V+N A+TG+ S K+PFGF
Sbjct: 781  MTKLTGWKREEVMDKMLLGEVFGIHMACCPLKNQEAFVNLGVVINRAMTGEVSEKVPFGF 840

Query: 2802 FSRNGKYVECLLCVSKKLDGEGAVTGLFCFXXXXXXXXXXXXHVQRISEQTASKRLRVLA 2981
            ++R GKY ECLLCVSKKLD EGAVTG+FCF            HVQR+SEQTA KR + LA
Sbjct: 841  WNRGGKYTECLLCVSKKLDSEGAVTGVFCFLQLASPELQQALHVQRLSEQTAVKRFKALA 900

Query: 2982 YIRREIKNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLHCQLQLNKILDDTDLDHIIEGYL 3161
            YI+R+I+NPLSGI+FSRKM+EGT+L  EQK L+ TS  CQ QL+KILDD+DLD II+GYL
Sbjct: 901  YIKRQIRNPLSGILFSRKMIEGTELGAEQKQLIHTSAQCQQQLSKILDDSDLDSIIDGYL 960

Query: 3162 DLEMVEFKLHEVLIASISQVMMKSNGKGIMIVDNLDPNLSNETLYGDSLRLQQVLAAFLL 3341
            DLEMVEF L EVL+ASISQVM+KSN K I  V + +  +  ETLYGDSLRLQQVLA F+ 
Sbjct: 961  DLEMVEFTLQEVLVASISQVMIKSNAKSIRTVQDANEEIMTETLYGDSLRLQQVLADFIS 1020

Query: 3342 VSVNSTPRGGQLGVAATLAKNSIGESVQLGHLEFRITH-GGGVPQELLNQMFGDEADASE 3518
            VSVN  P GGQL +A  L K+ +G+SV L HLEFRI+H GGGVP+ELLNQMFG + D SE
Sbjct: 1021 VSVNYMPPGGQLTLATNLTKDQLGQSVHLAHLEFRISHAGGGVPEELLNQMFGTDGDISE 1080

Query: 3519 DGISLFISRKLVKLMNGDVQYLREAGRSSFIISVELAISN 3638
            +GISL ISRKLVKLMNGDVQYLREAG+S+FIIS ELA ++
Sbjct: 1081 EGISLLISRKLVKLMNGDVQYLREAGKSTFIISAELAAAH 1120