BLASTX nr result
ID: Rehmannia23_contig00000171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00000171
(524 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arab... 133 2e-29
ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabi... 132 6e-29
ref|XP_006402306.1| hypothetical protein EUTSA_v10006498mg [Eutr... 131 8e-29
ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding pro... 131 8e-29
gb|ACU24035.1| unknown [Glycine max] 131 8e-29
gb|ESW16629.1| hypothetical protein PHAVU_007G172100g [Phaseolus... 131 1e-28
ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Caps... 131 1e-28
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis] 130 1e-28
gb|EOX94778.1| Chloroplast stem-loop binding protein of 41 kDa i... 130 1e-28
gb|EOX94777.1| Chloroplast stem-loop binding protein of 41 kDa i... 130 1e-28
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro... 130 2e-28
gb|ACU24107.1| unknown [Glycine max] 130 2e-28
ref|XP_004955807.1| PREDICTED: chloroplast stem-loop binding pro... 130 2e-28
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc... 129 4e-28
ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding pro... 128 7e-28
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr... 128 9e-28
ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Popu... 127 2e-27
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g... 127 2e-27
ref|XP_002459548.1| hypothetical protein SORBIDRAFT_02g006430 [S... 125 4e-27
gb|EPS64566.1| hypothetical protein M569_10212 [Genlisea aurea] 125 8e-27
>ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp.
lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein
ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 133 bits (335), Expect = 2e-29
Identities = 64/84 (76%), Positives = 72/84 (85%)
Frame = +3
Query: 273 SPRRAVSSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGS 452
S R + F+ + +KKNVLIVNTNSGGHAVIGFYFAKELL+AGHGVTI+TVG+E S
Sbjct: 63 SRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDESS 122
Query: 453 DKMKKPPFNRFSEIVSGGGKTVWG 524
DKMKKPPFNRFSEI+SGGGKTVWG
Sbjct: 123 DKMKKPPFNRFSEIISGGGKTVWG 146
>ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]
gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic; Short=CSP41-a; Flags: Precursor
gi|16226201|gb|AAL16101.1|AF428269_1
AT3g63140/T20O10_240 [Arabidopsis thaliana]
gi|7573443|emb|CAB87759.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|16649035|gb|AAL24369.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|22136252|gb|AAM91204.1| mRNA binding protein
precursor-like [Arabidopsis thaliana]
gi|332646919|gb|AEE80440.1| chloroplast stem-loop
binding protein-41 [Arabidopsis thaliana]
Length = 406
Score = 132 bits (331), Expect = 6e-29
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +3
Query: 273 SPRRAVSSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGS 452
S R + F+ + EKKNVLIVNTNSGGHAVIGFYFAKELL+AGH VTILTVG+E S
Sbjct: 61 SRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDESS 120
Query: 453 DKMKKPPFNRFSEIVSGGGKTVWG 524
+KMKKPPFNRFSEIVSGGGKTVWG
Sbjct: 121 EKMKKPPFNRFSEIVSGGGKTVWG 144
>ref|XP_006402306.1| hypothetical protein EUTSA_v10006498mg [Eutrema salsugineum]
gi|557103405|gb|ESQ43759.1| hypothetical protein
EUTSA_v10006498mg [Eutrema salsugineum]
Length = 402
Score = 131 bits (330), Expect = 8e-29
Identities = 65/84 (77%), Positives = 70/84 (83%)
Frame = +3
Query: 273 SPRRAVSSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGS 452
S R + S F V+A KKNVLIVNTNSGGHAVIGFYFAKELL+AGH VTI TVG+E S
Sbjct: 57 SLRSSRRSSPQRFTVKAHKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTIFTVGDESS 116
Query: 453 DKMKKPPFNRFSEIVSGGGKTVWG 524
DKM KPPF+RFSEIVSGGGKTVWG
Sbjct: 117 DKMNKPPFSRFSEIVSGGGKTVWG 140
>ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 403
Score = 131 bits (330), Expect = 8e-29
Identities = 66/78 (84%), Positives = 70/78 (89%)
Frame = +3
Query: 291 SSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 470
++FS S A AEKK VLIVNTNSGGHA+IGFYFAKELL AGH VTILTVGEEGSDKMKKP
Sbjct: 65 AAFSIS-ASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKP 123
Query: 471 PFNRFSEIVSGGGKTVWG 524
PFNRFSEIVS GG+TVWG
Sbjct: 124 PFNRFSEIVSAGGRTVWG 141
>gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 131 bits (330), Expect = 8e-29
Identities = 66/78 (84%), Positives = 70/78 (89%)
Frame = +3
Query: 291 SSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 470
++FS S A AEKK VLIVNTNSGGHA+IGFYFAKELL AGH VTILTVGEEGSDKMKKP
Sbjct: 65 AAFSIS-ASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKMKKP 123
Query: 471 PFNRFSEIVSGGGKTVWG 524
PFNRFSEIVS GG+TVWG
Sbjct: 124 PFNRFSEIVSAGGRTVWG 141
>gb|ESW16629.1| hypothetical protein PHAVU_007G172100g [Phaseolus vulgaris]
Length = 402
Score = 131 bits (329), Expect = 1e-28
Identities = 65/78 (83%), Positives = 69/78 (88%)
Frame = +3
Query: 291 SSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 470
S+FS S A EKK VLIVNTNSGGHA+IGFYFAKELL AGH VT+LTVGEEGSDKMKKP
Sbjct: 64 SAFSVS-ASSVEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTVLTVGEEGSDKMKKP 122
Query: 471 PFNRFSEIVSGGGKTVWG 524
PFNRFSEIVS GG+TVWG
Sbjct: 123 PFNRFSEIVSAGGRTVWG 140
>ref|XP_006291238.1| hypothetical protein CARUB_v10017370mg [Capsella rubella]
gi|482559945|gb|EOA24136.1| hypothetical protein
CARUB_v10017370mg [Capsella rubella]
Length = 404
Score = 131 bits (329), Expect = 1e-28
Identities = 67/88 (76%), Positives = 74/88 (84%), Gaps = 4/88 (4%)
Frame = +3
Query: 273 SPRRAVSSFSPSFAVRA----EKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVG 440
S R + +S F V+A EKKNVLIVNTNSGGHAVIGFYFAKELL+AGHGVTI+TVG
Sbjct: 55 SLRTSRTSSPQRFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVG 114
Query: 441 EEGSDKMKKPPFNRFSEIVSGGGKTVWG 524
+E SDKMKKPPF+RFSEIVS GGKTVWG
Sbjct: 115 DESSDKMKKPPFSRFSEIVSAGGKTVWG 142
>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
Length = 408
Score = 130 bits (328), Expect = 1e-28
Identities = 65/76 (85%), Positives = 69/76 (90%), Gaps = 3/76 (3%)
Frame = +3
Query: 306 SFAVRA---EKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPF 476
SF+VRA +KK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTVG+EGSDKMKKPPF
Sbjct: 71 SFSVRASAADKKRVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGDEGSDKMKKPPF 130
Query: 477 NRFSEIVSGGGKTVWG 524
NRFSEIVS GGKTVWG
Sbjct: 131 NRFSEIVSAGGKTVWG 146
>gb|EOX94778.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2
[Theobroma cacao]
Length = 393
Score = 130 bits (328), Expect = 1e-28
Identities = 67/80 (83%), Positives = 71/80 (88%), Gaps = 4/80 (5%)
Frame = +3
Query: 297 FSPS-FAVRA---EKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMK 464
+SPS F V+A EKK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTVG+EGSDKMK
Sbjct: 59 YSPSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMK 118
Query: 465 KPPFNRFSEIVSGGGKTVWG 524
KPPFNRFSEIVS GGKTVWG
Sbjct: 119 KPPFNRFSEIVSAGGKTVWG 138
>gb|EOX94777.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1
[Theobroma cacao]
Length = 400
Score = 130 bits (328), Expect = 1e-28
Identities = 67/80 (83%), Positives = 71/80 (88%), Gaps = 4/80 (5%)
Frame = +3
Query: 297 FSPS-FAVRA---EKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMK 464
+SPS F V+A EKK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTVG+EGSDKMK
Sbjct: 59 YSPSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKMK 118
Query: 465 KPPFNRFSEIVSGGGKTVWG 524
KPPFNRFSEIVS GGKTVWG
Sbjct: 119 KPPFNRFSEIVSAGGKTVWG 138
>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 404
Score = 130 bits (327), Expect = 2e-28
Identities = 65/78 (83%), Positives = 70/78 (89%)
Frame = +3
Query: 291 SSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 470
++FS S A AEKK VLIVNTNSGGHA+IGFYFAKELL AGH VTILTVG+EGSDKMKKP
Sbjct: 66 AAFSIS-ASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKP 124
Query: 471 PFNRFSEIVSGGGKTVWG 524
PFNRFSEIVS GG+TVWG
Sbjct: 125 PFNRFSEIVSAGGRTVWG 142
>gb|ACU24107.1| unknown [Glycine max]
Length = 208
Score = 130 bits (327), Expect = 2e-28
Identities = 65/78 (83%), Positives = 70/78 (89%)
Frame = +3
Query: 291 SSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKP 470
++FS S A AEKK VLIVNTNSGGHA+IGFYFAKELL AGH VTILTVG+EGSDKMKKP
Sbjct: 66 AAFSIS-ASAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKMKKP 124
Query: 471 PFNRFSEIVSGGGKTVWG 524
PFNRFSEIVS GG+TVWG
Sbjct: 125 PFNRFSEIVSAGGRTVWG 142
>ref|XP_004955807.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Setaria italica]
Length = 397
Score = 130 bits (326), Expect = 2e-28
Identities = 64/83 (77%), Positives = 72/83 (86%), Gaps = 1/83 (1%)
Frame = +3
Query: 279 RRAVSSFSPSFAVRAE-KKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSD 455
RRA + + +VRAE KK+VLIVNTNSGGHAVIGFYFAKELLAAGH VT+LTVG+EGSD
Sbjct: 50 RRAAPAARAAVSVRAEAKKSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSD 109
Query: 456 KMKKPPFNRFSEIVSGGGKTVWG 524
KMKKPPF+RFSE+ GGKTVWG
Sbjct: 110 KMKKPPFSRFSELTGAGGKTVWG 132
>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
gi|222843840|gb|EEE81387.1| mRNA-binding family protein
[Populus trichocarpa]
Length = 404
Score = 129 bits (324), Expect = 4e-28
Identities = 65/79 (82%), Positives = 69/79 (87%), Gaps = 3/79 (3%)
Frame = +3
Query: 297 FSPSFAVRA---EKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKK 467
F+ SF V+A EKK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTVGEE SDKMKK
Sbjct: 64 FTSSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKMKK 123
Query: 468 PPFNRFSEIVSGGGKTVWG 524
PPF+RFSEIVS GGKTVWG
Sbjct: 124 PPFSRFSEIVSAGGKTVWG 142
>ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cucumis sativus]
Length = 409
Score = 128 bits (322), Expect = 7e-28
Identities = 67/85 (78%), Positives = 71/85 (83%), Gaps = 7/85 (8%)
Frame = +3
Query: 291 SSFSPS----FAVRAE---KKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEG 449
SSF PS F+VRA KK VLIVNTNSGGHAVIGFYFAK+LL +GH VTILTVGE+
Sbjct: 63 SSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQS 122
Query: 450 SDKMKKPPFNRFSEIVSGGGKTVWG 524
SDKM KPPFNRFSEIVSGGGKTVWG
Sbjct: 123 SDKMNKPPFNRFSEIVSGGGKTVWG 147
>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa a,
chloroplastic-like [Citrus sinensis]
gi|557546339|gb|ESR57317.1| hypothetical protein
CICLE_v10020449mg [Citrus clementina]
Length = 401
Score = 128 bits (321), Expect = 9e-28
Identities = 65/86 (75%), Positives = 72/86 (83%)
Frame = +3
Query: 267 AKSPRRAVSSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEE 446
A S R +VS+F+ A AEKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVG+E
Sbjct: 55 ASSRRSSVSAFTVK-ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
Query: 447 GSDKMKKPPFNRFSEIVSGGGKTVWG 524
SDKMKKPPFNRF+EIVS GGKTVWG
Sbjct: 114 NSDKMKKPPFNRFNEIVSAGGKTVWG 139
>ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Populus trichocarpa]
gi|550339578|gb|EEE93769.2| hypothetical protein
POPTR_0005s23110g [Populus trichocarpa]
Length = 437
Score = 127 bits (319), Expect = 2e-27
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = +3
Query: 279 RRAVSSFSPSFAVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDK 458
RR +S P A AEKK +LIVNTNSGGHAVIGFYFAKELL +GH V+ILTVGEE SDK
Sbjct: 94 RRLFASSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVGEESSDK 153
Query: 459 MKKPPFNRFSEIVSGGGKTVWG 524
MKKPPF+RFSEIV GGKTVWG
Sbjct: 154 MKKPPFSRFSEIVGAGGKTVWG 175
>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
gi|355479697|gb|AES60900.1| MRNA-binding protein
[Medicago truncatula]
Length = 401
Score = 127 bits (318), Expect = 2e-27
Identities = 61/71 (85%), Positives = 63/71 (88%)
Frame = +3
Query: 312 AVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPFNRFSE 491
A AEKK VLI+NTNSGGHAVIGFYFAKELL AGH VTILTVG+E SDKMKKPPFNRFSE
Sbjct: 69 ASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKMKKPPFNRFSE 128
Query: 492 IVSGGGKTVWG 524
IVS GG TVWG
Sbjct: 129 IVSAGGSTVWG 139
>ref|XP_002459548.1| hypothetical protein SORBIDRAFT_02g006430 [Sorghum bicolor]
gi|241922925|gb|EER96069.1| hypothetical protein
SORBIDRAFT_02g006430 [Sorghum bicolor]
Length = 407
Score = 125 bits (315), Expect = 4e-27
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = +3
Query: 312 AVRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPFNRFSE 491
A A+K++VLIVNTNSGGHAVIGFYFAKELLAAGH VT+LTVG+EGSDKMKKPPF+RFSE
Sbjct: 69 AEAAKKQSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVLTVGDEGSDKMKKPPFSRFSE 128
Query: 492 IVSGGGKTVWG 524
+ S GGKTVWG
Sbjct: 129 LTSAGGKTVWG 139
>gb|EPS64566.1| hypothetical protein M569_10212 [Genlisea aurea]
Length = 307
Score = 125 bits (313), Expect = 8e-27
Identities = 58/70 (82%), Positives = 66/70 (94%)
Frame = +3
Query: 315 VRAEKKNVLIVNTNSGGHAVIGFYFAKELLAAGHGVTILTVGEEGSDKMKKPPFNRFSEI 494
VR+EKKNVLIVNT++GGHAVIGFYFAKELL++GH VT+ TVG+E S KMKKPPFNRFSEI
Sbjct: 14 VRSEKKNVLIVNTDTGGHAVIGFYFAKELLSSGHDVTVFTVGDEDSAKMKKPPFNRFSEI 73
Query: 495 VSGGGKTVWG 524
V+GGGKTVWG
Sbjct: 74 VNGGGKTVWG 83