BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00000105
         (690 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...   172   1e-40
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   167   3e-39
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   150   4e-34
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             148   2e-33
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...   147   2e-33
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...   147   2e-33
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   147   4e-33
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   144   3e-32
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   138   2e-30
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   134   3e-29
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...   130   5e-28
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   125   1e-26
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   124   2e-26
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...   120   3e-25
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   120   4e-25
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]           120   4e-25
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   120   4e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                119   7e-25
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   119   9e-25
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   119   9e-25

>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score =  172 bits (435), Expect = 1e-40
 Identities = 92/226 (40%), Positives = 130/226 (57%), Gaps = 9/226 (3%)
 Frame = -1

Query: 654 KWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFLWNK----KRHP 487
           +W+  SLSYAG++ LI++V+QGI  FW+ IFPLP+SV+  I   CR FLW K    K  P
Sbjct: 110 RWSRKSLSYAGKVELIRAVIQGIANFWMSIFPLPQSVLDTIIATCRNFLWGKADGGKIKP 169

Query: 486 -IAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWT 310
            +AW +VC P +EGGLG+ ++  WN ALLS ILW  H   ++LWVR VH +Y +  ++W 
Sbjct: 170 LVAWSEVCTPKKEGGLGLFNLKDWNIALLSCILWDLHSKKDSLWVRLVHHYYFKGGNVWD 229

Query: 309 WKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLN----SSKMYDIFRNE 142
           +     DS  +     IRD +I    S++  I+    ++   G N    + KMYD  R  
Sbjct: 230 FISSSSDSVFI----HIRDIII----SKEENIEVAKLMLNSWGCNEQTLAGKMYDYIRGT 281

Query: 141 GPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDPMC 4
            P   W + IW   IP K SF  WLA K+RL  LD  ++++   +C
Sbjct: 282 RPVVHWSSIIWNPVIPSKMSFILWLATKNRLLALDRAAFLNKGFLC 327


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  167 bits (423), Expect = 3e-39
 Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
 Frame = -1

Query: 690 APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
           +PL D+I   I  WTA  LSYAGRL L+ SV+  +  +WL  FP PKSV+++I  +CR F
Sbjct: 158 SPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIF 217

Query: 510 LWN-----KKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
           LW       ++ P+AW  +C P   GGL I D+  WNKA L K+LW      ++LWV+W+
Sbjct: 218 LWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWI 277

Query: 345 HGFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSK 166
             +Y++   +   + +  DS ++K I + R++L          ID +  L+    +N  K
Sbjct: 278 QAYYVKRSELMHIEMKNTDSWIMKAILKQREDL--------EKIDNMEELMIRGSINMGK 329

Query: 165 MYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL 31
           +Y   ++ G R  W N ++     P+ +F  WLAC  RLST D L
Sbjct: 330 LYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRL 374


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  150 bits (379), Expect = 4e-34
 Identities = 79/223 (35%), Positives = 114/223 (51%), Gaps = 5/223 (2%)
 Frame = -1

Query: 684  LHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFLW 505
            L D+I   I  W+A  LSYAGR+ LI+SV+     FW+Q  PLPK VI RI  +CR+FLW
Sbjct: 602  LIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLW 661

Query: 504  N-----KKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHG 340
                   ++ PIAW  VC P   GGL I ++  WNK  + K+LW     ++ LW++W+H 
Sbjct: 662  IGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHT 721

Query: 339  FYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSKMY 160
            +Y+R QSIW+   +K  S ++  + ++R  L+Q     Q                  K+Y
Sbjct: 722  YYIRGQSIWSMVLKKSHSWIMSSMMKLRPLLLQYQSRMQDV------------FKMKKIY 769

Query: 159  DIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL 31
                 E  +  W   +      P+  FC W AC  RL++ D L
Sbjct: 770  LALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRL 812


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  148 bits (373), Expect = 2e-33
 Identities = 82/225 (36%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
 Frame = -1

Query: 690 APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
           +PL + I   I  WT   LSYAGRL LI SVL  I  FWL  F LP+  I+ I K+C AF
Sbjct: 314 SPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAF 373

Query: 510 LW-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
           LW     N ++  + W DVC P +EGGLG+R +   N+    K++W+    T +LWVRW+
Sbjct: 374 LWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWI 433

Query: 345 HGFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSK 166
             + L++ + W+ +   +  ++L R     DE + KF ++ +                  
Sbjct: 434 EQYLLKHDTFWSVQTTTNMDSVLWR--GRNDEYMPKFSTRDT------------------ 473

Query: 165 MYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL 31
            ++  RN      WH  IW     PKFSFC WLA ++RLST D +
Sbjct: 474 -WNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKM 517


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score =  147 bits (372), Expect = 2e-33
 Identities = 80/186 (43%), Positives = 108/186 (58%), Gaps = 5/186 (2%)
 Frame = -1

Query: 690 APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
           APL  +I   I  W+  SLSYAG+L LI++V+QGI  FW+ IFPLP+SV+ RI   CR F
Sbjct: 110 APLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWIGIFPLPQSVLDRINASCRNF 169

Query: 510 LW-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
           LW      KK+  +AW  VC P  EGGLG+ ++  WN ALLS ILW FH   ++L   WV
Sbjct: 170 LWGKADIGKKKPLVAWSVVCSPKREGGLGLFNLKDWNLALLSCILWDFHCKKDSL---WV 226

Query: 345 HGFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSK 166
           H +Y R   +W +      S L+K+I +IRD +I K  S + A   +     +  L   K
Sbjct: 227 HHYYFRRSDVWNYNTSSSYSVLIKKIIQIRDFIISKELSTEEAKKRIQSWRTNGQLLVGK 286

Query: 165 MYDIFR 148
           +Y+  R
Sbjct: 287 VYEYIR 292


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score =  147 bits (372), Expect = 2e-33
 Identities = 76/156 (48%), Positives = 99/156 (63%), Gaps = 5/156 (3%)
 Frame = -1

Query: 690 APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
           APL  +I   I  W   SLSY G+L LIK+V+QGI  FW++IFPLP+SV+ RI   C  F
Sbjct: 143 APLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNFWMRIFPLPQSVLDRINASCCNF 202

Query: 510 LWNK----KRHP-IAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
           LW+K    K  P +AW  VC P +EGGLG+ ++  WN ALLS ILW FH   ++L VRWV
Sbjct: 203 LWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKDWNLALLSHILWDFHCKKDSLRVRWV 262

Query: 345 HGFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQK 238
           H +Y R    W +     +S L+K+I +IRD +I K
Sbjct: 263 HHYYFRRSDEWNYNISSSNSVLIKKIIQIRDFIISK 298


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  147 bits (370), Expect = 4e-33
 Identities = 83/241 (34%), Positives = 129/241 (53%), Gaps = 12/241 (4%)
 Frame = -1

Query: 687  PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
            PL D+I      W A+ LSYAGRL L+K++L  ++ +W QIFPLPK +IK +   CR FL
Sbjct: 776  PLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFL 835

Query: 507  W-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
            W        + P+AW  +  P   GGL + ++  WNKA + K+LW      + LWVRWV+
Sbjct: 836  WTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVN 895

Query: 342  GFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSKM 163
             +Y++ Q+I       + S +L++I E R EL+ + G  ++  + +   +K       K 
Sbjct: 896  AYYIKRQNIENVTVSSNTSWILRKIFESR-ELLTRTGGWEAVSNHMNFSIK-------KT 947

Query: 162  YDIFRNEGPRHFWHNAIWKQFI-----PPKFSFCTWLACKDRLSTLDNLS--YIDTDPMC 4
            Y + + +     + N +WK+ I      PK  F  WLA  +RL+T + +S    D  P+C
Sbjct: 948  YKLLQED-----YENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLC 1002

Query: 3    K 1
            K
Sbjct: 1003 K 1003


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  144 bits (362), Expect = 3e-32
 Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 5/225 (2%)
 Frame = -1

Query: 687  PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
            PL + I      W A  LSYAGRL LIKS+L  ++ +W  IFPL K VI+ + K+CR FL
Sbjct: 773  PLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFL 832

Query: 507  WN-----KKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
            W       K+ P+AW  +  P   GG  + ++  WN+A + K+LW      + LWVRW+H
Sbjct: 833  WTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIH 892

Query: 342  GFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSKM 163
             +Y++ Q I T       + +L++I + RD L        S I     +   +  +  K 
Sbjct: 893  SYYIKRQDILTVNISNQTTWILRKIVKARDHL--------SNIGDWDEICIGDKFSMKKA 944

Query: 162  YDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLS 28
            Y      G R  W   I   +  PK  F  W+   +RL T+D +S
Sbjct: 945  YKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRIS 989


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  138 bits (347), Expect = 2e-30
 Identities = 79/229 (34%), Positives = 114/229 (49%), Gaps = 10/229 (4%)
 Frame = -1

Query: 687  PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
            PL D+I   I  WT+  L+  GR+ ++   +  I  FW+Q  P+P SVIK+I  +CR+F+
Sbjct: 601  PLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFV 660

Query: 507  WNK-----KRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
            W++     ++ PIAW+ VC P  +GGL I ++  WN   +   LW   +  + LWV+W+H
Sbjct: 661  WSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIH 720

Query: 342  GFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNS--- 172
              Y++N S+       + S +LK +            SQ+  I  L P V D  LNS   
Sbjct: 721  AHYIKNSSVMNTMVTNNFSWVLKNVL-----------SQREYIHTLQP-VWDELLNSERF 768

Query: 171  --SKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL 31
               K YD    E  R  W   + K    P+    TWLAC  RL T D L
Sbjct: 769  KMKKAYDKMM-EADRVHWSGLMRKNCARPRAIHTTWLACHGRLGTKDRL 816


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  134 bits (337), Expect = 3e-29
 Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 13/233 (5%)
 Frame = -1

Query: 687  PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
            PL ++I + I  W    LSYAGRL L+ SV+  +  FW+  F LP++ I+ I ++  AFL
Sbjct: 1043 PLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFL 1102

Query: 507  W-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
            W     N  +  +AWHDVC P  EGGLG+R +   NK    K++W+      +LWV W+ 
Sbjct: 1103 WSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQ 1162

Query: 342  GFYLRN--QSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNG---- 181
               +R   +++ + + R     +L  I    +E ++K   +    +    L +  G    
Sbjct: 1163 NNLIRTVAEALSSHRRRSHRDDILNDI----EEELEKLLCRGICTEQDRSLCRSIGGQFK 1218

Query: 180  --LNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLS 28
                S +++   R +G    WH AIW     PKF+F +WLA  DRL+T D ++
Sbjct: 1219 AKFFSPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMA 1271


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score =  130 bits (326), Expect = 5e-28
 Identities = 64/130 (49%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
 Frame = -1

Query: 690 APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
           APL  +I   I  W+  SLSYAG+L LI++V+QGI  FW++IFPL +SV+ RI   C  F
Sbjct: 110 APLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWMKIFPLSQSVLDRINASCCNF 169

Query: 510 LWNK-----KRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
           LW K      +  IAW  VC P +EGGLG+ ++  WN  LLS+ILW FH   + LWVRWV
Sbjct: 170 LWGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVRWV 229

Query: 345 HGFYLRNQSI 316
           H +Y R   +
Sbjct: 230 HHYYFRASDV 239


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  125 bits (314), Expect = 1e-26
 Identities = 53/130 (40%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
 Frame = -1

Query: 687 PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
           PL +++ A I+ WTA  LSYAGR  L+K+VL G++  W Q+F +P  +IK I  LCR++L
Sbjct: 581 PLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYL 640

Query: 507 WN-----KKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
           W+      K+  IAW  VC P  EGGLG+ ++  WN++ ++K+ W      + LW++W+H
Sbjct: 641 WSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIH 700

Query: 342 GFYLRNQSIW 313
            +Y++ Q  W
Sbjct: 701 AYYIKGQREW 710


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  124 bits (312), Expect = 2e-26
 Identities = 63/239 (26%), Positives = 124/239 (51%), Gaps = 10/239 (4%)
 Frame = -1

Query: 687 PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
           PL ++I   I  W++  LS AGR+ L++S++  I  +W+ +FP+PK VI++I  +CR+F+
Sbjct: 262 PLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFI 321

Query: 507 WN-----KKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
           W+     K++  +AW  VC P   GGL + ++  WN   + K LW      + LWV+W+H
Sbjct: 322 WSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIH 381

Query: 342 GFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSKM 163
            ++L+  ++ +   + + + +LK + + R ++        +       +++    +  ++
Sbjct: 382 AYFLKGDNVMSATIKSNSTWILKSVMKQRPQV-------NNLQLVWIEMLRKRKFSMKQV 434

Query: 162 YDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLST---LDNLSYIDTD--PMCK 1
           Y     +  +  W   +      P+ +   WLAC++RL+T   L N++ I      +CK
Sbjct: 435 YMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKNMNMIQCSLCSLCK 493


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/141 (43%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
 Frame = -1

Query: 687 PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
           PL +RI   I  WTA  LS+AGRL LI SV+  +  FW+  F LP + IK I  LC AFL
Sbjct: 8   PLIERIRERISCWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPNACIKEIDGLCSAFL 67

Query: 507 W-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
           W     N+K+  ++W+DVC+P EEGGLG+R +   NK    K++W+    + +LWV+W+ 
Sbjct: 68  WSGPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEANKVCCLKLIWRL-LSSSSLWVQWLR 126

Query: 342 GFYLRNQSIWTWKPRKDDSTL 280
            + +R  S W+    +D STL
Sbjct: 127 QYVIRKGSFWS---LRDTSTL 144


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  120 bits (301), Expect = 4e-25
 Identities = 69/189 (36%), Positives = 100/189 (52%), Gaps = 6/189 (3%)
 Frame = -1

Query: 687 PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
           PL + I   I  W+A  LSYAGRL LI SVL  I  FW+  F LP+  I+ I K+C A+L
Sbjct: 170 PLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAYL 229

Query: 507 W-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
           W     N  +  IAW DVC P +EGGLG+R +   N     K++W+     ++LWV+W+H
Sbjct: 230 WSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIH 289

Query: 342 GFYLRNQSIWTWKPRKD-DSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSK 166
              L+  S W  +      S + K++ + RD  IQ   ++ +   A T    DN  +  +
Sbjct: 290 ATLLKQVSFWAVRENTSLGSWMWKKVLKFRDAAIQLCKAEVNN-GAHTFFWYDNWSDMGR 348

Query: 165 MYDIFRNEG 139
           + DI  + G
Sbjct: 349 LIDIAGDRG 357


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
 Frame = -1

Query: 687 PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
           PL ++I   I KWTA  LS+AGRL LI SV+  +  FW+  F LP + IK I  +C +FL
Sbjct: 44  PLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFL 103

Query: 507 W-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
           W     N K+  +AW DVC P +EGGLGIR +   NK  L K++W+    T +LWV+W+ 
Sbjct: 104 WSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKVSLLKLIWRMLSST-SLWVQWLR 162

Query: 342 GFYLRNQSIWT 310
            + LR  S W+
Sbjct: 163 LYLLRKGSFWS 173


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  120 bits (301), Expect = 4e-25
 Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 6/152 (3%)
 Frame = -1

Query: 687  PLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAFL 508
            PL ++I A I  WT   LS+AGRL LIKSVL  I  FWL +F LPK+ ++ I K+  AFL
Sbjct: 935  PLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFL 994

Query: 507  W-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVH 343
            W     N K+  IAW +VC   EEGGLG++ +   N+  L K++W+     ++LWV+WV+
Sbjct: 995  WSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVN 1054

Query: 342  GFYLRNQSIWTWKPRKD-DSTLLKRICEIRDE 250
               +R ++ W+ K      S L ++I + RD+
Sbjct: 1055 KHLIRKETFWSVKENTGLGSWLWRKILKQRDK 1086


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  119 bits (299), Expect = 7e-25
 Identities = 61/152 (40%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
 Frame = -1

Query: 690 APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
           +PL D++ + I  WTA SLSYAGRL LI SV+  +  FW+  + LP   IK I KLC AF
Sbjct: 360 SPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAF 419

Query: 510 LW-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
           LW     N K+  I W  +C   +EGGLGI+ +   NK    K++W+      +LWV WV
Sbjct: 420 LWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWV 479

Query: 345 HGFYLRNQSIWTWKPRKD-DSTLLKRICEIRD 253
             + +R  S W+   R    S + K++ + RD
Sbjct: 480 WTYIIRKGSFWSANDRSSLGSWMWKKLLKYRD 511


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  119 bits (298), Expect = 9e-25
 Identities = 64/189 (33%), Positives = 99/189 (52%), Gaps = 5/189 (2%)
 Frame = -1

Query: 690 APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
           +PL ++I   I  WTA  LSYAGRL L+ SVL  I  FWL  F LP+  ++ I KLC AF
Sbjct: 305 SPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAF 364

Query: 510 LW-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
           LW     +  +  IAW  VC P  EGGLG++ +   N     K++W+     ++LWV+W+
Sbjct: 365 LWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWI 424

Query: 345 HGFYLRNQSIWTWKPRKDDSTLLKRICEIRDELIQKFGSQQSAIDALTPLVKDNGLNSSK 166
             + L+  + W+++     S + K++ + RD              A + +   NG  +S 
Sbjct: 425 RTYLLKRNTFWSFRSASQGSWMWKKLLKYRD-----------TAKAFSKVDIRNGETASF 473

Query: 165 MYDIFRNEG 139
            YD + ++G
Sbjct: 474 WYDDWSSKG 482


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  119 bits (298), Expect = 9e-25
 Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
 Frame = -1

Query: 690  APLHDRIAAYIDKWTANSLSYAGRLLLIKSVLQGIECFWLQIFPLPKSVIKRIYKLCRAF 511
            +PL D++ + I  WTA SLSYAGRL LI SV+  +  FW+  + LP   IK I KLC AF
Sbjct: 929  SPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAF 988

Query: 510  LW-----NKKRHPIAWHDVCLPIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWV 346
            LW     N K+  I W  +C   +EGGLGI+ +   NK    K++W+      +LWV WV
Sbjct: 989  LWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWV 1048

Query: 345  HGFYLRNQSIWTWKPRKD-DSTLLKRICEIRD 253
              + +R  S W+   R    S + K++   RD
Sbjct: 1049 WTYIIRKGSFWSANDRSSLGSWMWKKLLNYRD 1080