BLASTX nr result
ID: Rehmannia23_contig00000078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00000078
(720 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 79 2e-12
ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A... 78 3e-12
gb|EPS66084.1| hypothetical protein M569_08688 [Genlisea aurea] 78 3e-12
ref|XP_006830167.1| hypothetical protein AMTR_s00244p00011780 [A... 77 4e-12
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 77 7e-12
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|5... 75 3e-11
gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides] 75 3e-11
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 74 5e-11
gb|EOY11808.1| DEAD box RNA helicase isoform 1 [Theobroma cacao] 72 2e-10
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 71 4e-10
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr... 71 4e-10
ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Popu... 70 9e-10
ref|XP_002330040.1| predicted protein [Populus trichocarpa] 70 9e-10
gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus pe... 68 3e-09
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 67 6e-09
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr... 67 6e-09
ref|XP_004495832.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 67 8e-09
ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 65 2e-08
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 65 2e-08
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota... 64 4e-08
>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Solanum tuberosum]
Length = 744
Score = 78.6 bits (192), Expect = 2e-12
Identities = 38/47 (80%), Positives = 41/47 (87%), Gaps = 1/47 (2%)
Frame = -3
Query: 625 DWLI-GDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLI GDRRSSRS S G +D RSFGGACFNCGR GHRASECP+K+DY
Sbjct: 699 DWLISGDRRSSRSLSGGSRD-RSFGGACFNCGRSGHRASECPNKRDY 744
>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
gi|548843569|gb|ERN03223.1| hypothetical protein
AMTR_s00003p00168720 [Amborella trichopoda]
Length = 768
Score = 77.8 bits (190), Expect = 3e-12
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLIG+RRS+RS SFG +D RSFGGACF CGR GHRA++CPSK+D+
Sbjct: 724 DWLIGNRRSNRSSSFGSRD-RSFGGACFVCGRAGHRAADCPSKQDF 768
>gb|EPS66084.1| hypothetical protein M569_08688 [Genlisea aurea]
Length = 775
Score = 77.8 bits (190), Expect = 3e-12
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECP-SKKDY 488
DWLI DR SSRSPSFGG+D R FGGACF CGR GHRAS+CP S+ DY
Sbjct: 730 DWLINDRSSSRSPSFGGRD-RGFGGACFKCGRAGHRASDCPNSRSDY 775
>ref|XP_006830167.1| hypothetical protein AMTR_s00244p00011780 [Amborella trichopoda]
gi|548836288|gb|ERM97583.1| hypothetical protein
AMTR_s00244p00011780 [Amborella trichopoda]
Length = 207
Score = 77.4 bits (189), Expect = 4e-12
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWL+G+RRS+RS SFG +D RSFGGACF CGR GHRA++CPSK+D+
Sbjct: 163 DWLVGNRRSNRSSSFGSRD-RSFGGACFVCGRTGHRAADCPSKQDF 207
>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
protein product [Vitis vinifera]
Length = 764
Score = 76.6 bits (187), Expect = 7e-12
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLIG RRS+RS S G RSFGG+CF CGR GHRASECP+K+DY
Sbjct: 719 DWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSGHRASECPNKRDY 764
>ref|XP_002330044.1| predicted protein [Populus trichocarpa]
gi|566168507|ref|XP_006382239.1| hypothetical protein
POPTR_0005s00240g [Populus trichocarpa]
gi|550337590|gb|ERP60036.1| hypothetical protein
POPTR_0005s00240g [Populus trichocarpa]
Length = 775
Score = 74.7 bits (182), Expect = 3e-11
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLIG RRSSR PS RSFGG+CFNCGR GHRASECP+KKD+
Sbjct: 734 DWLIGGRRSSRPPS----RDRSFGGSCFNCGRSGHRASECPNKKDF 775
>gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 481
Score = 74.7 bits (182), Expect = 3e-11
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLIG RRSSR PS RSFGG+CFNCGR GHRASECP+KKD+
Sbjct: 440 DWLIGGRRSSRPPS----RDRSFGGSCFNCGRSGHRASECPNKKDF 481
>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Solanum lycopersicum]
Length = 746
Score = 73.9 bits (180), Expect = 5e-11
Identities = 36/49 (73%), Positives = 40/49 (81%), Gaps = 3/49 (6%)
Frame = -3
Query: 625 DWLIG---DRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLI D+RSSRS S G +D RSFGGACFNCGR GHRASECP+K+DY
Sbjct: 699 DWLISGDRDKRSSRSFSGGSRD-RSFGGACFNCGRSGHRASECPNKRDY 746
>gb|EOY11808.1| DEAD box RNA helicase isoform 1 [Theobroma cacao]
Length = 742
Score = 71.6 bits (174), Expect = 2e-10
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLIG RRS RS S RSFGG+CFNCGRPGHRAS+CP K D+
Sbjct: 701 DWLIGSRRSKRSSSH----DRSFGGSCFNCGRPGHRASDCPEKLDF 742
>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 767
Score = 70.9 bits (172), Expect = 4e-10
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPS 500
DWLIG RSSRS S +DSRSFGGACFNCGR GHRASECP+
Sbjct: 729 DWLIGGSRSSRSSS---RDSRSFGGACFNCGRSGHRASECPN 767
>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
gi|567862566|ref|XP_006423937.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
gi|557525869|gb|ESR37175.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
gi|557525871|gb|ESR37177.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
Length = 779
Score = 70.9 bits (172), Expect = 4e-10
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPS 500
DWLIG RSSRS S +DSRSFGGACFNCGR GHRASECP+
Sbjct: 741 DWLIGGSRSSRSSS---RDSRSFGGACFNCGRSGHRASECPN 779
>ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
gi|550337585|gb|ERP60031.1| hypothetical protein
POPTR_0005s00200g [Populus trichocarpa]
Length = 774
Score = 69.7 bits (169), Expect = 9e-10
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPS 500
DWL+G RRSSR S +DSRSFGG+CFNCGR GHRASECP+
Sbjct: 736 DWLVGGRRSSRPSS---RDSRSFGGSCFNCGRSGHRASECPN 774
>ref|XP_002330040.1| predicted protein [Populus trichocarpa]
Length = 735
Score = 69.7 bits (169), Expect = 9e-10
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPS 500
DWL+G RRSSR S +DSRSFGG+CFNCGR GHRASECP+
Sbjct: 697 DWLVGGRRSSRPSS---RDSRSFGGSCFNCGRSGHRASECPN 735
>gb|EMJ09551.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
Length = 766
Score = 68.2 bits (165), Expect = 3e-09
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWLIG R SSRS S RSFGG+CFNCGR GHRASECP+K+ Y
Sbjct: 725 DWLIGGRPSSRSSS----RDRSFGGSCFNCGRSGHRASECPTKQGY 766
>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 768
Score = 67.0 bits (162), Expect = 6e-09
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPS 500
DWLIG RSSRS S SRSFGGACFNCGR GHRASECP+
Sbjct: 729 DWLIGGSRSSRSSS--RDSSRSFGGACFNCGRSGHRASECPN 768
>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
gi|557525870|gb|ESR37176.1| hypothetical protein
CICLE_v10027858mg [Citrus clementina]
Length = 780
Score = 67.0 bits (162), Expect = 6e-09
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPS 500
DWLIG RSSRS S SRSFGGACFNCGR GHRASECP+
Sbjct: 741 DWLIGGSRSSRSSS--RDSSRSFGGACFNCGRSGHRASECPN 780
>ref|XP_004495832.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Cicer arietinum]
Length = 571
Score = 66.6 bits (161), Expect = 8e-09
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKKDY 488
DWL GD RSSR + + S+GGACFNCG+PGHRASEC +K+D+
Sbjct: 528 DWLTGDSRSSR---YSSSNRSSYGGACFNCGQPGHRASECTNKRDF 570
>ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 772
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/44 (68%), Positives = 33/44 (75%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPSKK 494
DWLIG R+ R PS RSFGG+CFNCG+ GHRASECPSKK
Sbjct: 730 DWLIGGTRTGRIPS----RDRSFGGSCFNCGQSGHRASECPSKK 769
>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 766
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/42 (73%), Positives = 32/42 (76%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDSRSFGGACFNCGRPGHRASECPS 500
DWLIG RSSRS S RSFGGACFNCGR GHRASECP+
Sbjct: 729 DWLIGGSRSSRSSS----RDRSFGGACFNCGRSGHRASECPN 766
>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
Length = 810
Score = 64.3 bits (155), Expect = 4e-08
Identities = 31/47 (65%), Positives = 33/47 (70%), Gaps = 4/47 (8%)
Frame = -3
Query: 625 DWLIGDRRSSRSPSFGGKDS----RSFGGACFNCGRPGHRASECPSK 497
DWLIG R+S S S G S RSFGG+CFNCGR GHRASECP K
Sbjct: 731 DWLIGGRKSGSSWSQGSSRSSSRDRSFGGSCFNCGRSGHRASECPDK 777