BLASTX nr result
ID: Rehmannia22_contig00040531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00040531
(581 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera] 133 2e-53
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 132 4e-53
emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 130 7e-53
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 126 4e-51
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 124 4e-50
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 127 5e-49
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 127 6e-49
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] 114 5e-48
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 124 7e-48
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 124 7e-48
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 124 7e-48
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 124 7e-48
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 129 9e-48
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 124 1e-47
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 124 3e-47
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 125 4e-47
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 125 4e-47
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 125 4e-47
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 125 4e-47
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 125 4e-47
>emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera]
Length = 591
Score = 133 bits (334), Expect(2) = 2e-53
Identities = 63/114 (55%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
Frame = -2
Query: 340 NAISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTT 161
N ISWS KKQ+TVA+SST+AEYRT+AST A++ W+ L EL ++L +P+IY DN+G T
Sbjct: 451 NPISWSSKKQRTVARSSTEAEYRTVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGAT 510
Query: 160 -FCANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPLGSSR 2
C+N+VFHSRMKH+++DYHF+++ V L VSH+ +S+QL D L KPL R
Sbjct: 511 HLCSNSVFHSRMKHVALDYHFIQEQVQNGLLRVSHISASNQLVDALTKPLARPR 564
Score = 102 bits (255), Expect(2) = 2e-53
Identities = 49/82 (59%), Positives = 61/82 (74%)
Frame = -3
Query: 579 LTRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSD 400
LTRPD+A+ V+KLSQFM PT+ H A KRLLRYL GTLD+ + LRR+S L AF DSD
Sbjct: 371 LTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTSPLALHAFSDSD 430
Query: 399 WGGDSSEMKSTAAYLIYLGPMP 334
W G+ ++ ST+AY+IYLG P
Sbjct: 431 WAGNKNDFTSTSAYIIYLGHNP 452
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 132 bits (331), Expect(2) = 4e-53
Identities = 63/110 (57%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Frame = -2
Query: 340 NAISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIG-T 164
N ISWS KKQ+TVA+SST+AEYR++AST A++ W+ L EL ++L +P+IY DN+G T
Sbjct: 338 NPISWSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGAT 397
Query: 163 TFCANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
C+N VFHSRMKH+++DYHF+R+ V L VSH+ +S QLAD L KPL
Sbjct: 398 NLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPL 447
Score = 102 bits (254), Expect(2) = 4e-53
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = -3
Query: 579 LTRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSD 400
LTRPD+A+ V+KLSQFM PT+ H A KRLLRYL GTLD+ + LRR+S L AF DSD
Sbjct: 258 LTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTSPLALHAFSDSD 317
Query: 399 WGGDSSEMKSTAAYLIYLGPMP 334
W G+ + ST+AY+IYLG P
Sbjct: 318 WAGNKDDFTSTSAYIIYLGHNP 339
>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
Length = 569
Score = 130 bits (327), Expect(2) = 7e-53
Identities = 62/110 (56%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Frame = -2
Query: 340 NAISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTT 161
N ISWS KKQ+TVA+SST+ EYR++AST A++ W+ L EL ++L +P+IY DN+G T
Sbjct: 429 NPISWSSKKQRTVARSSTEVEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVGAT 488
Query: 160 -FCANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
C+N VFHSRMKH+++DYHF+R+ V L VSH+ +S QLAD L KPL
Sbjct: 489 HLCSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISASDQLADALTKPL 538
Score = 103 bits (256), Expect(2) = 7e-53
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = -3
Query: 579 LTRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSD 400
LTRPD+A+ V+KL QFM PT+ H A KRLLRYL GTLD+ + LRR+S L F AF DSD
Sbjct: 349 LTRPDIAYTVNKLCQFMHQPTSDHWNAVKRLLRYLCGTLDHSITLRRTSPLAFHAFSDSD 408
Query: 399 WGGDSSEMKSTAAYLIYLGPMP 334
W G+ + ST+AY+IYLG P
Sbjct: 409 WAGNKDDFTSTSAYIIYLGHNP 430
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 126 bits (317), Expect(2) = 4e-51
Identities = 62/108 (57%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
I+WS KKQK VA+SST+AEYR +A+TT+++ W+ L EL ++L P+IY DN+G T+
Sbjct: 1407 IAWSSKKQKGVARSSTEAEYRAVANTTSEIRWVCSLLTELGITLPKMPVIYCDNVGATYL 1466
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
AN VFHSRMKHL++DYHF+RD VS L VSH+ + QLAD L KPL
Sbjct: 1467 SANPVFHSRMKHLALDYHFIRDNVSAGALRVSHISTHDQLADALTKPL 1514
Score = 101 bits (251), Expect(2) = 4e-51
Identities = 46/90 (51%), Positives = 63/90 (70%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+A+ V++LSQFM PT +H QAAKR+LRYL GT +G+ LR +S L AF D+DW
Sbjct: 1326 TRPDIAYAVNRLSQFMHRPTDIHWQAAKRVLRYLAGTATHGILLRSNSPLSLHAFSDADW 1385
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD+ + ST AY++YLG P ++ +K
Sbjct: 1386 AGDNDDFVSTNAYIVYLGSTPIAWSSKKQK 1415
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 124 bits (312), Expect(2) = 4e-50
Identities = 59/110 (53%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Frame = -2
Query: 340 NAISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTT 161
N ISWS KKQ+ V++SST++EYR +A+ +++ WL L ELH+ L P I+ DNIG T
Sbjct: 1330 NPISWSSKKQRGVSRSSTESEYRAVANAASEIRWLCSLLTELHIRLPHGPTIFCDNIGAT 1389
Query: 160 F-CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
+ CAN VFHSRMKH+++DYHFVR ++ + L VSHV ++ QLAD L K L
Sbjct: 1390 YICANPVFHSRMKHIALDYHFVRGMIQSRALRVSHVSTNDQLADALTKSL 1439
Score = 99.8 bits (247), Expect(2) = 4e-50
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+AF V++LSQFM PT+ H QAAKR+LRYL GT +G+ L SS + AF D+DW
Sbjct: 1251 TRPDIAFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNSSSPIHLHAFSDADW 1310
Query: 396 GGDSSEMKSTAAYLIYLGPMP 334
GDS++ ST AY+IYLG P
Sbjct: 1311 AGDSADYVSTNAYVIYLGRNP 1331
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 127 bits (319), Expect(2) = 5e-49
Identities = 61/110 (55%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = -2
Query: 340 NAISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTT 161
N ISWS KKQ+ VA+SST++EYR +A+ +++ WL L +LH+ L +P I+ DNIG T
Sbjct: 1345 NPISWSSKKQRGVARSSTESEYRAVANAASEVKWLCSLLSKLHIRLPIRPSIFCDNIGAT 1404
Query: 160 F-CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
+ CAN VFHSRMKH++IDYHFVR+++ L VSHV + QLAD L KPL
Sbjct: 1405 YLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVSHVSTRDQLADALTKPL 1454
Score = 93.6 bits (231), Expect(2) = 5e-49
Identities = 45/81 (55%), Positives = 56/81 (69%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+A+ V++LSQ M PT H QAAKR+LRYL GT +G+ L +S L AF D+DW
Sbjct: 1266 TRPDIAYAVNRLSQLMPQPTEDHWQAAKRVLRYLAGTSTHGIFLDTTSPLNLHAFSDADW 1325
Query: 396 GGDSSEMKSTAAYLIYLGPMP 334
GDS + ST AY+IYLG P
Sbjct: 1326 AGDSDDYVSTNAYVIYLGKNP 1346
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 127 bits (318), Expect(2) = 6e-49
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
Frame = -2
Query: 349 FRPNAISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNI 170
F + +SWS KKQ++VA+SST+AEYR +A+T ++L WL L E+ +S P+IY DNI
Sbjct: 1297 FGGSPVSWSSKKQRSVARSSTEAEYRAVANTASELRWLCSLLLEMGISQTTVPVIYCDNI 1356
Query: 169 GTTF-CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPLGSSR 2
G T+ CAN VFHSRMKH+++DYHFVR + L VSHV + QLAD L KPL R
Sbjct: 1357 GATYLCANPVFHSRMKHVALDYHFVRGYIQSGALRVSHVSTKDQLADALTKPLPRPR 1413
Score = 93.6 bits (231), Expect(2) = 6e-49
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+AF V++LSQFM PT H QAAKR+LRYL GT +G+ LR + L AF D+DW
Sbjct: 1221 TRPDIAFAVNRLSQFMHRPTNEHWQAAKRILRYLAGTKSHGIFLRSDTPLTIHAFSDADW 1280
Query: 396 GGDSSEMKSTAAYLIYLGPMP 334
G D ST AY++Y G P
Sbjct: 1281 GCDLDAYLSTNAYIVYFGGSP 1301
>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
Length = 1112
Score = 114 bits (284), Expect(2) = 5e-48
Identities = 54/99 (54%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Frame = -2
Query: 340 NAISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIG-T 164
N ISWS KKQ+TVA+SST+AEYR++AST A++ W+ L EL ++L +P+IY DN+G T
Sbjct: 998 NPISWSSKKQRTVARSSTKAEYRSVASTAAEICWICSLLTELGVTLPQQPVIYCDNVGAT 1057
Query: 163 TFCANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSS 47
+N VFHSRMKH+++DYHF+R+ V L VSH+ +S
Sbjct: 1058 NLYSNPVFHSRMKHVALDYHFIREQVQNGLLRVSHISAS 1096
Score = 103 bits (257), Expect(2) = 5e-48
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = -3
Query: 579 LTRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSD 400
LTRPD+A+ V+KLSQFM PT+ H A KRLLRYL GTLD+G+ LRR+S L F DSD
Sbjct: 918 LTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLRRTSPLALHVFSDSD 977
Query: 399 WGGDSSEMKSTAAYLIYLGPMP 334
W G+ + ST+AY+IYLG P
Sbjct: 978 WAGNKDDFTSTSAYIIYLGHNP 999
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 124 bits (311), Expect(2) = 7e-48
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T++++ W+ L EL + L P+IY DN+G T+
Sbjct: 1339 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1398
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH++IDYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1399 CANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1446
Score = 92.8 bits (229), Expect(2) = 7e-48
Identities = 40/90 (44%), Positives = 61/90 (67%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQFM PT H+QA KR+LRYL GT ++G+ L++ + L A+ D+DW
Sbjct: 1258 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1317
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD + ST Y++YLG P ++ +K
Sbjct: 1318 AGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1347
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 124 bits (311), Expect(2) = 7e-48
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T++++ W+ L EL + L P+IY DN+G T+
Sbjct: 1339 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1398
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH++IDYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1399 CANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1446
Score = 92.8 bits (229), Expect(2) = 7e-48
Identities = 40/90 (44%), Positives = 61/90 (67%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQFM PT H+QA KR+LRYL GT ++G+ L++ + L A+ D+DW
Sbjct: 1258 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1317
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD + ST Y++YLG P ++ +K
Sbjct: 1318 AGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1347
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 124 bits (311), Expect(2) = 7e-48
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T++++ W+ L EL + L P+IY DN+G T+
Sbjct: 1339 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1398
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH++IDYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1399 CANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1446
Score = 92.8 bits (229), Expect(2) = 7e-48
Identities = 40/90 (44%), Positives = 61/90 (67%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQFM PT H+QA KR+LRYL GT ++G+ L++ + L A+ D+DW
Sbjct: 1258 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1317
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD + ST Y++YLG P ++ +K
Sbjct: 1318 AGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1347
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 124 bits (311), Expect(2) = 7e-48
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T++++ W+ L EL + L P+IY DN+G T+
Sbjct: 1304 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1363
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH++IDYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1364 CANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1411
Score = 92.8 bits (229), Expect(2) = 7e-48
Identities = 40/90 (44%), Positives = 61/90 (67%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQFM PT H+QA KR+LRYL GT ++G+ L++ + L A+ D+DW
Sbjct: 1223 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1282
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD + ST Y++YLG P ++ +K
Sbjct: 1283 AGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1312
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 129 bits (324), Expect(2) = 9e-48
Identities = 63/112 (56%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISW KKQKTVA+SST+AEYR +AST A++ W+ L EL ++L P IY DN+ T+
Sbjct: 1292 ISWCSKKQKTVARSSTEAEYRAVASTAAEVTWVSHLLSELGITLQQSPTIYCDNLSATYL 1351
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPLGSSR 2
C N +FHSRMKH+++DYHFVR+ V L VSHV + QLAD+L KPL SR
Sbjct: 1352 CVNPLFHSRMKHVALDYHFVREKVXDGSLKVSHVNTQSQLADVLTKPLSKSR 1403
Score = 87.4 bits (215), Expect(2) = 9e-48
Identities = 48/103 (46%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
Frame = -3
Query: 579 LTRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYG--------LHLRRSSD-- 430
LTR D+AF V+KL+QFM PT H AAKRLLRYLK T+ G LHL+ SD
Sbjct: 1198 LTRLDIAFAVNKLAQFMHAPTQTHWTAAKRLLRYLKHTIHLGLTFRRXQPLHLQAYSDVT 1257
Query: 429 --LQFRAFCDSDWGGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
L RA+ D+DW GD KST A++++LG P ++ +K
Sbjct: 1258 PPLDLRAYSDADWAGDPDSYKSTTAFVLFLGGHPISWCSKKQK 1300
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 124 bits (311), Expect(2) = 1e-47
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T++++ W+ L EL + L P+IY DN+G T+
Sbjct: 1320 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1379
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH++IDYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1380 CANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1427
Score = 92.0 bits (227), Expect(2) = 1e-47
Identities = 40/90 (44%), Positives = 61/90 (67%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQFM PT H+QA KR+LRYL GT ++G+ L++ + L A+ D+DW
Sbjct: 1239 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1298
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD + ST Y++YLG P ++ +K
Sbjct: 1299 TGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1328
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 124 bits (311), Expect(2) = 3e-47
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T++++ W+ L EL + L P+IY DN+G T+
Sbjct: 1320 ISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYL 1379
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH++IDYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1380 CANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1427
Score = 90.5 bits (223), Expect(2) = 3e-47
Identities = 39/90 (43%), Positives = 61/90 (67%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQFM PT H+QA KR+L+YL GT ++G+ L++ + L A+ D+DW
Sbjct: 1239 TRPDISYAVNRLSQFMHMPTEEHLQALKRILQYLAGTPNHGIFLKKGNTLSLHAYSDADW 1298
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD + ST Y++YLG P ++ +K
Sbjct: 1299 TGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1328
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 125 bits (313), Expect(2) = 4e-47
Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T+++L W+ L EL + L+ P+IY DN+G T+
Sbjct: 1341 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1400
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH+++DYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1401 CANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1448
Score = 89.4 bits (220), Expect(2) = 4e-47
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQ+M PT H A KR+LRYL GT D+G+ L++ + L A+ D+DW
Sbjct: 1260 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1319
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD+ + ST Y++YLG P ++ +K
Sbjct: 1320 AGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1349
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 125 bits (313), Expect(2) = 4e-47
Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T+++L W+ L EL + L+ P+IY DN+G T+
Sbjct: 1341 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1400
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH+++DYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1401 CANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1448
Score = 89.4 bits (220), Expect(2) = 4e-47
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQ+M PT H A KR+LRYL GT D+G+ L++ + L A+ D+DW
Sbjct: 1260 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1319
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD+ + ST Y++YLG P ++ +K
Sbjct: 1320 AGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1349
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 125 bits (313), Expect(2) = 4e-47
Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T+++L W+ L EL + L+ P+IY DN+G T+
Sbjct: 1341 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1400
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH+++DYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1401 CANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1448
Score = 89.4 bits (220), Expect(2) = 4e-47
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQ+M PT H A KR+LRYL GT D+G+ L++ + L A+ D+DW
Sbjct: 1260 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1319
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD+ + ST Y++YLG P ++ +K
Sbjct: 1320 AGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1349
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 125 bits (313), Expect(2) = 4e-47
Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T+++L W+ L EL + L+ P+IY DN+G T+
Sbjct: 1322 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1381
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH+++DYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1382 CANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1429
Score = 89.4 bits (220), Expect(2) = 4e-47
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQ+M PT H A KR+LRYL GT D+G+ L++ + L A+ D+DW
Sbjct: 1241 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1300
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD+ + ST Y++YLG P ++ +K
Sbjct: 1301 AGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1330
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 125 bits (313), Expect(2) = 4e-47
Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Frame = -2
Query: 334 ISWSCKKQKTVAKSSTQAEYRTIASTTAKLLWLRELSKELHLSLAGKPLIYSDNIGTTF- 158
ISWS KKQK V +SST+AEYR++A+T+++L W+ L EL + L+ P+IY DN+G T+
Sbjct: 1196 ISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYL 1255
Query: 157 CANTVFHSRMKHLSIDYHFVRDLVSKQELTVSHVPSSHQLADLLKKPL 14
CAN VFHSRMKH+++DYHF+R+ V L V HV + QLAD L KPL
Sbjct: 1256 CANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPL 1303
Score = 89.4 bits (220), Expect(2) = 4e-47
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = -3
Query: 576 TRPDVAFCVSKLSQFMQTPTTLHMQAAKRLLRYLKGTLDYGLHLRRSSDLQFRAFCDSDW 397
TRPD+++ V++LSQ+M PT H A KR+LRYL GT D+G+ L++ + L A+ D+DW
Sbjct: 1115 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1174
Query: 396 GGDSSEMKSTAAYLIYLGPMPSPGLARSRK 307
GD+ + ST Y++YLG P ++ +K
Sbjct: 1175 AGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1204