BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00040395
         (347 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...    61   2e-07
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    59   7e-07

>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = +2

Query: 14  PWHFTGSFVEAYLNIVQDIVRVPIA--PTSVDKRVWVHSLDEDVFSKAAYAHLRTSGPSV 187
           PW+F       +L+I + I  VPI+  P   DK +WV S   ++ +K A+  +R   PS+
Sbjct: 3   PWNFPMLLQFHFLDICKLINDVPISIVPDMSDKLIWVPSSSGELLAKEAFQFMRPRLPSL 62

Query: 188 KWGTWIWSSSIP*RRCIIVWRAILHRLTVLDLLRHRAFIGPSFCCLC 328
            W   IWS  I  R  +  W+ +  R+   DLL+ R  +  S C LC
Sbjct: 63  DWSKLIWSKFIIPRISLHSWKVLRGRVLSEDLLQRRGIVLASRCVLC 109


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
 Frame = +2

Query: 71  VRVPIAPTSVDKRVWVHSLDEDVFSKAAYAHLRTSGPSVKWGTWIWSSSIP*RRCIIVWR 250
           + +P+  T +DK +W  S+D D+ +K A++ L   GP+V W   +W++  P     I WR
Sbjct: 32  IALPLDET-LDKLIWTDSVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWR 90

Query: 251 AILHRLTVLDLLRHR-AFIGPSFCCLCHAPSE 343
            + ++L   D LR R  +I    CC C   +E
Sbjct: 91  FLHNKLPTDDNLRKRGCYIVSICCCFCRKQAE 122