BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00040290
         (394 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   164   1e-38
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]   160   2e-37
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   157   1e-36
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   156   3e-36
gb|AAU90262.1| integrase core domain containing protein [Oryza s...   156   3e-36
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc...   155   4e-36
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   155   4e-36
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   155   5e-36
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   155   5e-36
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   155   7e-36
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762...   155   7e-36
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  155   7e-36
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  155   7e-36
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]   154   9e-36
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   154   9e-36
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   154   1e-35
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   154   2e-35
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   152   4e-35
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   152   6e-35
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   151   8e-35

>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  164 bits (415), Expect = 1e-38
 Identities = 69/127 (54%), Positives = 100/127 (78%)
 Frame = +1

Query: 13  RIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQSG 192
           ++K FQ+D G EF+ L   F ++GIIH++SCP+T +QNG +ERKH+HI+E+GL+LL+Q+ 
Sbjct: 437 KLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQAS 496

Query: 193 IPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPYNK 372
           +P K+W D+F+T+V+LIN +P + +  K P+E L+   P YS L+VFGC CFPHLRPYNK
Sbjct: 497 LPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNK 556

Query: 373 NKLELRS 393
           +KL+ RS
Sbjct: 557 HKLDFRS 563


>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
          Length = 1242

 Score =  160 bits (405), Expect = 2e-37
 Identities = 68/127 (53%), Positives = 97/127 (76%)
 Frame = +1

Query: 13   RIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQSG 192
            ++  FQ D G EF+ L   F ++GIIH++SCP+T +QNG +ERKH+HI+E+GL+LL+Q+ 
Sbjct: 683  KLXTFQXDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQAS 742

Query: 193  IPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPYNK 372
            +P K+W D+F+T V+LIN +P + +  K P+E L+   P YS L+VFGC CFPHLRPYNK
Sbjct: 743  LPLKYWPDAFSTXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNK 802

Query: 373  NKLELRS 393
            +KL+ RS
Sbjct: 803  HKLDFRS 809


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score =  157 bits (397), Expect = 1e-36
 Identities = 71/129 (55%), Positives = 94/129 (72%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           N++I   QSD G E++ L   F++ GI H VSCP+T QQNG+ ERKH+HI+EVGL+LL+ 
Sbjct: 574 NRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAY 633

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           S +P KFWD++F  +VYLIN  P K + + +P E L+   P YS LRVFGC C+PHLRPY
Sbjct: 634 SSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPY 693

Query: 367 NKNKLELRS 393
           N +KL+ RS
Sbjct: 694 NTHKLQFRS 702


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  156 bits (394), Expect = 3e-36
 Identities = 67/131 (51%), Positives = 96/131 (73%)
 Frame = +1

Query: 1    QTNKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLL 180
            Q   +IK  QSD G E++   +  + +GIIH++SCPYT +QNG  ERKH+HI+E G++LL
Sbjct: 621  QLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALL 680

Query: 181  SQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLR 360
            +Q+ +P K+WD++F TSVYLIN +P   +  KSP E L+   P+YS L+VFGC C+P+LR
Sbjct: 681  AQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLR 740

Query: 361  PYNKNKLELRS 393
            P+N +KL+ RS
Sbjct: 741  PFNHHKLQFRS 751


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
           Group] gi|108710062|gb|ABF97857.1| retrotransposon
           protein, putative, Ty1-copia subclass, expressed [Oryza
           sativa Japonica Group]
          Length = 1021

 Score =  156 bits (394), Expect = 3e-36
 Identities = 71/129 (55%), Positives = 91/129 (70%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           N++I   QSD G E++ L   F++ GI H VSCPY  QQNG+ ERKH+HI+EVGLSLL+ 
Sbjct: 489 NRKIIAMQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAH 548

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD++F T+ YLIN  P+K I Y +P E L    P YS LR FGC C+P+LRPY
Sbjct: 549 ASMPLKFWDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPY 608

Query: 367 NKNKLELRS 393
           N  KL+ RS
Sbjct: 609 NNRKLQFRS 617


>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1016

 Score =  155 bits (393), Expect = 4e-36
 Identities = 70/129 (54%), Positives = 92/129 (71%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           N++I   Q+D G E++ L   F++ GI H VSCPY  QQNG+ ERKH+HI+EVGL+LL+ 
Sbjct: 185 NRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLAH 244

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD++F  + YLIN +P+K I Y +P E L    P YS LR FGC C+P+LRPY
Sbjct: 245 ASVPLKFWDEAFLAATYLINRLPSKVIQYSAPLERLLDQKPNYSALRTFGCACWPNLRPY 304

Query: 367 NKNKLELRS 393
           NK KLE RS
Sbjct: 305 NKRKLEFRS 313


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108706314|gb|ABF94109.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1247

 Score =  155 bits (393), Expect = 4e-36
 Identities = 69/129 (53%), Positives = 95/129 (73%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           N++I   QSD G E++ L   F++ GI H VSCP+T QQNG+ ERKH+HI+E+GL+LL+ 
Sbjct: 372 NRKILAMQSDWGGEYEKLNSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEMGLALLAY 431

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           S +P KFWD++F ++VYLIN  P++ + Y +P E L+   P Y+ LRVFGC C+PHLRPY
Sbjct: 432 SSMPLKFWDEAFTSAVYLINRTPSRLLKYATPLERLFKQTPDYNLLRVFGCACWPHLRPY 491

Query: 367 NKNKLELRS 393
           N  KL+ RS
Sbjct: 492 NARKLQFRS 500


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  155 bits (392), Expect = 5e-36
 Identities = 69/131 (52%), Positives = 97/131 (74%)
 Frame = +1

Query: 1   QTNKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLL 180
           Q +++I   Q+D G E++ L   FS+ GI+H VSCP+T QQNG+ ERKH+HI+E+GLSLL
Sbjct: 566 QFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLL 625

Query: 181 SQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLR 360
           S + +P KFWD++F  + YLIN +P++ I+  SP E L+   P YS LR+FGC C+P+LR
Sbjct: 626 SHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLR 685

Query: 361 PYNKNKLELRS 393
           PYN +KL+ RS
Sbjct: 686 PYNNHKLQFRS 696


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1478

 Score =  155 bits (392), Expect = 5e-36
 Identities = 69/131 (52%), Positives = 97/131 (74%)
 Frame = +1

Query: 1   QTNKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLL 180
           Q +++I   Q+D G E++ L   FS+ GI+H VSCP+T QQNG+ ERKH+HI+E+GLSLL
Sbjct: 599 QFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLL 658

Query: 181 SQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLR 360
           S + +P KFWD++F  + YLIN +P++ I+  SP E L+   P YS LR+FGC C+P+LR
Sbjct: 659 SHASMPLKFWDEAFQAATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLR 718

Query: 361 PYNKNKLELRS 393
           PYN +KL+ RS
Sbjct: 719 PYNNHKLQFRS 729


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score =  155 bits (391), Expect = 7e-36
 Identities = 72/129 (55%), Positives = 93/129 (72%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           +++I   Q+D G E++ L   F++ GI H VSCP+T QQNG+ ERKHKHIIEVGLSLLS 
Sbjct: 577 DRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSY 636

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD++F  + YLIN IP+KTI   +P E L+   P YS LRVF C C+PHL PY
Sbjct: 637 ASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPY 696

Query: 367 NKNKLELRS 393
           N +KL+ RS
Sbjct: 697 NTHKLQFRS 705


>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
          Length = 866

 Score =  155 bits (391), Expect = 7e-36
 Identities = 71/129 (55%), Positives = 94/129 (72%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           +K+I   QSD G E++ L   F + GI H+VSCP+T QQNG  ERKH+HIIEVGL+LL+ 
Sbjct: 486 SKKILCIQSDWGGEYEKLNSFFKKIGISHRVSCPHTHQQNGAAERKHRHIIEVGLALLAN 545

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD +F T+ YLIN +P+K IN++ P   L+G    YS+LRVFGC C+P+LRPY
Sbjct: 546 ASMPLKFWDQAFLTATYLINLLPSKVINFEIPATRLFGDTSDYSNLRVFGCACWPNLRPY 605

Query: 367 NKNKLELRS 393
           N +KL  RS
Sbjct: 606 NSHKLSFRS 614


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  155 bits (391), Expect = 7e-36
 Identities = 72/129 (55%), Positives = 93/129 (72%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           +++I   Q+D G E++ L   F++ GI H VSCP+T QQNG+ ERKHKHIIEVGLSLLS 
Sbjct: 577 DRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSY 636

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD++F  + YLIN IP+KTI   +P E L+   P YS LRVF C C+PHL PY
Sbjct: 637 ASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPY 696

Query: 367 NKNKLELRS 393
           N +KL+ RS
Sbjct: 697 NTHKLQFRS 705


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  155 bits (391), Expect = 7e-36
 Identities = 71/129 (55%), Positives = 94/129 (72%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           +++I   Q+D G E++ L   F++ GI H VSCP+T QQNG+ ERKH+HIIEVGLSLLS 
Sbjct: 574 DRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSY 633

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD++F  + YLIN +P+KTI   +P E L+   P Y  LRVFGC C+PHLRPY
Sbjct: 634 ASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPY 693

Query: 367 NKNKLELRS 393
           N +KL+ RS
Sbjct: 694 NTHKLQFRS 702


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score =  154 bits (390), Expect = 9e-36
 Identities = 69/131 (52%), Positives = 91/131 (69%)
 Frame = +1

Query: 1   QTNKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLL 180
           Q N  IK  QSD G EF          GI+H+ SCP+TPQQNG  +RK +H++E G++LL
Sbjct: 487 QLNSTIKCIQSDNGGEFIAFKPYLEAHGIVHQFSCPHTPQQNGRAKRKIRHLVETGMALL 546

Query: 181 SQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLR 360
           +QS +P+K+W  +F TSVYLIN +P K +N++SP + L+  +P Y HLRVFGC CFP LR
Sbjct: 547 AQSFLPSKYWSFAFQTSVYLINLLPTKLLNFQSPLQVLFHKIPNYHHLRVFGCLCFPSLR 606

Query: 361 PYNKNKLELRS 393
           PYN +KL  RS
Sbjct: 607 PYNHHKLSYRS 617


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score =  154 bits (390), Expect = 9e-36
 Identities = 70/129 (54%), Positives = 97/129 (75%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           N++I   Q+D G E++ L   F++ GI H VSCP+T QQNG+ ERKH+HI+EVGL+LL+ 
Sbjct: 572 NRKIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAY 631

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           S +P KFW ++F ++VYLIN  P++ ++  SP E L GH P Y+ LRVFGC C+P+LRPY
Sbjct: 632 SSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPY 691

Query: 367 NKNKLELRS 393
           NK+KL+ RS
Sbjct: 692 NKHKLQFRS 700


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score =  154 bits (389), Expect = 1e-35
 Identities = 69/129 (53%), Positives = 95/129 (73%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           +++I   Q+D G E++ L   FS+ GI+H VSCP+T QQNG+ ERKH+HI+EVGLSLLS 
Sbjct: 444 DRKILAMQTDWGGEYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSH 503

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD++F  + YLIN +P++ I   +P E  +   P YS LRVFGC C+P+LRPY
Sbjct: 504 AHMPLKFWDEAFQAATYLINRVPSRVIQNTTPLEKFFHQKPDYSSLRVFGCACWPNLRPY 563

Query: 367 NKNKLELRS 393
           NK+KL+ RS
Sbjct: 564 NKHKLQFRS 572


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  154 bits (388), Expect = 2e-35
 Identities = 71/128 (55%), Positives = 94/128 (73%)
 Frame = +1

Query: 10  KRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQS 189
           ++I  FQSD G E++ L   F   GI H+VSCP+T QQNG  ERKH+HI+EVGL+LL+QS
Sbjct: 575 RKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQS 634

Query: 190 GIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPYN 369
            +P K+WD +F  +VYLIN  P+KTI + +P   L G  P YS LR+FGC C+P+LRPYN
Sbjct: 635 SMPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLTGATPDYSSLRIFGCACWPNLRPYN 694

Query: 370 KNKLELRS 393
           ++KL+ RS
Sbjct: 695 QHKLQFRS 702


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1431

 Score =  152 bits (384), Expect = 4e-35
 Identities = 69/131 (52%), Positives = 93/131 (70%)
 Frame = +1

Query: 1   QTNKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLL 180
           Q +++I   Q+D G E+  L   F+E GI H VSCP+T QQNG VERKH+HI+EVGLSLL
Sbjct: 559 QFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLL 618

Query: 181 SQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLR 360
           + + +P KFWD++F  + YLIN +P+K I + +P E L+   P Y  LR FGC C+P+LR
Sbjct: 619 AHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLR 678

Query: 361 PYNKNKLELRS 393
           PYN +KL+ RS
Sbjct: 679 PYNTHKLQFRS 689


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1256

 Score =  152 bits (383), Expect = 6e-35
 Identities = 67/129 (51%), Positives = 91/129 (70%)
 Frame = +1

Query: 7   NKRIKMFQSDGGTEFKPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLSLLSQ 186
           N++I   Q+D G E++ L   F++ GI H VSCP+T QQNG+ ERKH+HI+EVGLSLL+ 
Sbjct: 403 NRKIISMQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAH 462

Query: 187 SGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPHLRPY 366
           + +P KFWD+++ + VYLIN +P K + Y SP E L+   P Y  LR FGC C+P LRPY
Sbjct: 463 ASLPLKFWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPY 522

Query: 367 NKNKLELRS 393
           N +K+  RS
Sbjct: 523 NSHKMHFRS 531


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  151 bits (382), Expect = 8e-35
 Identities = 73/133 (54%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
 Frame = +1

Query: 1   QTNKRIKMFQSDGGTEF--KPLIKTFSESGIIHKVSCPYTPQQNGTVERKHKHIIEVGLS 174
           Q N +IK+FQSDGG EF    L    SE GI H++SCPYTPQQNG  ERKH+H++E+GLS
Sbjct: 570 QLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLS 629

Query: 175 LLSQSGIPNKFWDDSFATSVYLIN*IPNKTINYKSPFEALYGHVPTYSHLRVFGCQCFPH 354
           +L  S  P KFW +SF T+ Y+IN +P+  +   SP+EAL+G  P YS LRVFG  C+P 
Sbjct: 630 MLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPC 689

Query: 355 LRPYNKNKLELRS 393
           LRP  +NK + RS
Sbjct: 690 LRPLAQNKFDPRS 702