BLASTX nr result
ID: Rehmannia22_contig00039867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00039867
(383 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 57 5e-17
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 65 5e-17
ref|XP_002517240.1| conserved hypothetical protein [Ricinus comm... 64 1e-16
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 65 1e-16
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 59 2e-16
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 68 4e-16
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group] 61 4e-16
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [... 59 5e-16
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 59 5e-16
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 64 5e-16
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 57 6e-16
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 1e-15
gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum] 62 1e-15
gb|EEC70040.1| hypothetical protein OsI_00627 [Oryza sativa Indi... 57 2e-15
gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus pe... 60 2e-15
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 56 2e-15
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 61 3e-15
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 61 3e-15
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo... 61 3e-15
ref|XP_004308581.1| PREDICTED: uncharacterized protein LOC101295... 60 3e-15
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 56.6 bits (135), Expect(3) = 5e-17
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = -3
Query: 339 FFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FFG P+ K + ++ + + KYLGLP +IG+ K FR V +I +W++
Sbjct: 699 FFGGKIPEEQKAAIRNIFNLNVVSKYEKYLGLPSMIGRKKTSFFREVKLRVLSKINNWQH 758
Query: 159 KFLSTAGKEILIK 121
K S+ GKEILIK
Sbjct: 759 KMFSSGGKEILIK 771
Score = 49.7 bits (117), Expect(3) = 5e-17
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNE 8
V ++P Y MSVF LP GLC+EI S I+ FWWG+ +
Sbjct: 773 VAQAVPAYAMSVFKLPKGLCEEIQSEIAKFWWGSKK 808
Score = 26.6 bits (57), Expect(3) = 5e-17
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 382 KFSGQTVNMDKSSIFFWKKYP 320
K SGQ N +KSS+FF K P
Sbjct: 685 KASGQIFNFEKSSMFFGGKIP 705
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 65.1 bits (157), Expect(3) = 5e-17
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
F +N P + D+ VL R+ KYLGLP + SK+E FRY+++ +KR Q W++K
Sbjct: 481 FSRNVPLWKQHDLAAVLGVQRVENHEKYLGLPTELSYSKDEAFRYLIDRVRKRTQGWRDK 540
Query: 156 FLSTAGKEILIK 121
LS GKE+L+K
Sbjct: 541 TLSGVGKEVLLK 552
Score = 44.3 bits (103), Expect(3) = 5e-17
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWG 17
V+ S+P YVMS F LP LC E+ +++ FWWG
Sbjct: 554 VIQSIPTYVMSCFELPRHLCNEMHQLMARFWWG 586
Score = 23.5 bits (49), Expect(3) = 5e-17
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 376 SGQTVNMDKSSIFFWKKYP 320
SGQ +N +KSS+ F + P
Sbjct: 468 SGQQINYEKSSVSFSRNVP 486
>ref|XP_002517240.1| conserved hypothetical protein [Ricinus communis]
gi|223543611|gb|EEF45140.1| conserved hypothetical
protein [Ricinus communis]
Length = 314
Score = 64.3 bits (155), Expect(3) = 1e-16
Identities = 32/73 (43%), Positives = 40/73 (54%)
Frame = -3
Query: 339 FFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FF +NTP + + VL + KYLGLP VI KSK FR + + KR+ W
Sbjct: 97 FFSQNTPTQQRHQLARVLAISHIRGQDKYLGLPAVISKSKKNTFREIKDRIAKRLAGWIG 156
Query: 159 KFLSTAGKEILIK 121
LST GKEI+IK
Sbjct: 157 ALLSTGGKEIMIK 169
Score = 43.9 bits (102), Expect(3) = 1e-16
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -2
Query: 121 RYVLNSLPVYVMSVFLLPVGLCQEISSIISNFWWG 17
+ V ++PVY MS F L GLC++I+ + S FWWG
Sbjct: 169 KVVTMAVPVYSMSCFALATGLCKDINRLFSKFWWG 203
Score = 23.5 bits (49), Expect(3) = 1e-16
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 376 SGQTVNMDKSSIFFWKKYP 320
SG+ VN KSSIFF + P
Sbjct: 85 SGKLVNKAKSSIFFSQNTP 103
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 64.7 bits (156), Expect(3) = 1e-16
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = -3
Query: 339 FFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
+F NTPD + + ++ + KYLGLP + G+SK E Y+V+ Q+++ WK
Sbjct: 161 YFSPNTPDQMSRLLGELMGFAEVEDPGKYLGLPTLWGRSKKEAVGYIVDRVQRKLVGWKQ 220
Query: 159 KFLSTAGKEILIKDM 115
+ LS AGKEILIK +
Sbjct: 221 RSLSWAGKEILIKSV 235
Score = 43.9 bits (102), Expect(3) = 1e-16
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGT 14
V ++P Y M+ F P G+C I+S +SNFWWG+
Sbjct: 235 VATAIPAYPMACFKFPKGVCDTINSALSNFWWGS 268
Score = 22.7 bits (47), Expect(3) = 1e-16
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 382 KFSGQTVNMDKSSIFFWKKYP 320
K SGQ +N +KSS +F P
Sbjct: 147 KASGQLINGEKSSAYFSPNTP 167
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 59.3 bits (142), Expect(2) = 2e-16
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
F N ++ + VL R+ + YLGLPM++G++K FRY+ E K++Q W+ +
Sbjct: 1141 FSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWREQ 1200
Query: 156 FLSTAGKEILIK 121
LS AGKE+L+K
Sbjct: 1201 TLSIAGKEVLLK 1212
Score = 52.0 bits (123), Expect(2) = 2e-16
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -2
Query: 121 RYVLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNEAN 2
+ V S+P+YVMS FLLP GLC EI +++ FWWG N
Sbjct: 1212 KVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGEN 1251
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 68.2 bits (165), Expect(2) = 4e-16
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = -3
Query: 339 FFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
+F NT KT+VC +L + + KYLGLP ++G ++ FR++++ RI WK
Sbjct: 588 YFSANTEADQKTEVCQILNIMTESLNDKYLGLPALVGLDRSNCFRHLIDRVNTRINGWKE 647
Query: 159 KFLSTAGKEILIKDM 115
K LS GKEILIK +
Sbjct: 648 KTLSLGGKEILIKSI 662
Score = 42.0 bits (97), Expect(2) = 4e-16
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNE 8
+ ++PVY M VF +P +C+ I++ IS +WWG ++
Sbjct: 662 IAQAVPVYAMMVFQIPKSICKGITNAISQYWWGDDD 697
>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1264
Score = 61.2 bits (147), Expect(3) = 4e-16
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = -3
Query: 324 TPDSVKTDVCHVLRGIRLHQSSK---YLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNKF 154
+P+++++D V + ++Q +K YLGLP+ IGKS+ + F Y+ RIQ W+ K
Sbjct: 1072 SPNTLQSDRMEVRSALCINQEAKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKL 1131
Query: 153 LSTAGKEILIK 121
LS AGKEIL+K
Sbjct: 1132 LSKAGKEILVK 1142
Score = 44.3 bits (103), Expect(3) = 4e-16
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNE 8
V ++P Y MS F L GLC EI+S+IS +WW N+
Sbjct: 1144 VAQAIPTYAMSCFDLTKGLCDEINSMISKWWWSQND 1179
Score = 24.3 bits (51), Expect(3) = 4e-16
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 376 SGQTVNMDKSSIFF 335
SGQ +N DKSS+ F
Sbjct: 1058 SGQVINKDKSSVLF 1071
>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
Length = 925
Score = 58.9 bits (141), Expect(2) = 5e-16
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
F N ++ + VL R+ + YLGLPM++G++K FRY+ E K++Q W+ +
Sbjct: 292 FSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTFCFRYLKERVWKKLQGWREQ 351
Query: 156 FLSTAGKEILIK 121
LS AGKE+L+K
Sbjct: 352 TLSIAGKEVLLK 363
Score = 50.8 bits (120), Expect(2) = 5e-16
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = -2
Query: 121 RYVLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNEAN 2
+ V S+P+YVM+ FLLP GLC EI +++ FWWG N
Sbjct: 363 KVVAQSIPLYVMNCFLLPQGLCHEIEQMMARFWWGQQGEN 402
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 58.5 bits (140), Expect(3) = 5e-16
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
F TP SVK V +L+ + + KYLGLP G+ K ++F +++ +++ SW ++
Sbjct: 618 FSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASR 677
Query: 156 FLSTAGKEILIK 121
FLS AGK++++K
Sbjct: 678 FLSQAGKQVMLK 689
Score = 45.4 bits (106), Expect(3) = 5e-16
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGT 14
VL S+P+Y MS F LP LC++I S+++ FWW T
Sbjct: 691 VLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDT 724
Score = 25.4 bits (54), Expect(3) = 5e-16
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 382 KFSGQTVNMDKSSIFFWKKYP 320
K SGQ++N KSS+ F K P
Sbjct: 603 KASGQSINFHKSSVTFSSKTP 623
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 63.5 bits (153), Expect(3) = 5e-16
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = -3
Query: 339 FFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FF NTP + +C ++ + + KYLGLP + G+ K + Y+ E +++ WK
Sbjct: 375 FFSPNTPAQMARLMCELMGFVEVENPGKYLGLPTIWGRLKKDALSYITERINRKLDGWKE 434
Query: 159 KFLSTAGKEILIKDM 115
K LS AGKE LIK +
Sbjct: 435 KNLSWAGKETLIKSV 449
Score = 42.0 bits (97), Expect(3) = 5e-16
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -2
Query: 103 LPVYVMSVFLLPVGLCQEISSIISNFWWGTNEA 5
+P + MS FLLP L +I+S ISNFWWG +E+
Sbjct: 453 IPSFPMSCFLLPKYLGNQINSAISNFWWGKSES 485
Score = 23.9 bits (50), Expect(3) = 5e-16
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 376 SGQTVNMDKSSIFFWKKYP 320
SGQ ++ +KSSIFF P
Sbjct: 363 SGQVISREKSSIFFSPNTP 381
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 57.4 bits (137), Expect(2) = 6e-16
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = -3
Query: 276 RLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNKFLSTAGKEILIK 121
R+ + YLGLPM++G++K FRY+ E K++Q W+ + LS AGKE+L+K
Sbjct: 681 RVDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWREQTLSIAGKEVLLK 732
Score = 52.0 bits (123), Expect(2) = 6e-16
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = -2
Query: 121 RYVLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNEAN 2
+ V S+P+YVMS FLLP GLC EI +++ FWWG N
Sbjct: 732 KVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGEN 771
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 58.9 bits (141), Expect(2) = 1e-15
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
F ++ ++ + +VL + + KYLGLP +IG+SK F + E K++Q WK K
Sbjct: 726 FSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEK 785
Query: 156 FLSTAGKEILIKDM 115
LS GKE+LIK +
Sbjct: 786 LLSRPGKEVLIKSV 799
Score = 49.7 bits (117), Expect(2) = 1e-15
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNEAN 2
V ++P Y+MSVF LP GL EI S+++ FWWG+++ N
Sbjct: 799 VAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTN 836
>gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum]
Length = 237
Score = 62.0 bits (149), Expect(3) = 1e-15
Identities = 31/78 (39%), Positives = 43/78 (55%)
Frame = -3
Query: 354 TSLVFFFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRI 175
T FF K+ + K + L R +YLGLP ++G+SK E+F+Y+ + K+
Sbjct: 49 TKSSIFFAKSMNEMRKQAIVRQLHMPRSSGDGRYLGLPYLVGRSKREIFQYLKDRIWKKA 108
Query: 174 QSWKNKFLSTAGKEILIK 121
WK K LS GKEILIK
Sbjct: 109 HGWKEKLLSHGGKEILIK 126
Score = 41.2 bits (95), Expect(3) = 1e-15
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWW 20
VL ++P + MSVF LP+ LC +I +I FWW
Sbjct: 128 VLQAIPTFAMSVFKLPLRLCCDIQAICRKFWW 159
Score = 24.6 bits (52), Expect(3) = 1e-15
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 382 KFSGQTVNMDKSSIFFWK 329
K GQ +N+ KSSIFF K
Sbjct: 40 KVLGQKINVTKSSIFFAK 57
>gb|EEC70040.1| hypothetical protein OsI_00627 [Oryza sativa Indica Group]
Length = 1499
Score = 56.6 bits (135), Expect(2) = 2e-15
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
FGK+ D++++D+ +L+ KYLGLP +G+ K ++ + E +KR+ W K
Sbjct: 1377 FGKHCGDALQSDIRSLLQVQHTSFEDKYLGLPTPMGRLKAGRYQSLKERFEKRLTDWNEK 1436
Query: 156 FLSTAGKEILIKDM 115
+LS GKE+LIK +
Sbjct: 1437 YLSMGGKEVLIKSV 1450
Score = 51.2 bits (121), Expect(2) = 2e-15
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWG 17
VL ++P YVMSVF LP GLC+E +I FWWG
Sbjct: 1450 VLQAIPTYVMSVFKLPAGLCEEYMQLIQKFWWG 1482
Score = 56.6 bits (135), Expect(2) = 4e-12
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
FGK+ D++++D+ +L+ KYLGLP +G+ K ++ + E +KR+ W K
Sbjct: 1033 FGKHCGDALQSDIRSLLQVQHTSFEDKYLGLPTPMGRLKAGRYQSLKERFEKRLTDWNEK 1092
Query: 156 FLSTAGKEILIKDM 115
+LS GKE+LIK +
Sbjct: 1093 YLSMGGKEVLIKSV 1106
Score = 40.0 bits (92), Expect(2) = 4e-12
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNF 26
VL ++P YVMSVF LP GLC+E +I F
Sbjct: 1106 VLQAIPTYVMSVFKLPAGLCEEYMQLIRKF 1135
>gb|EMJ21280.1| hypothetical protein PRUPE_ppa024663mg [Prunus persica]
Length = 681
Score = 60.1 bits (144), Expect(3) = 2e-15
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = -3
Query: 339 FFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FF NT + D+C +L + YLGLP + G+SKN Y+ E K++ WK
Sbjct: 103 FFSSNTLVETRRDICALLNINGVDNPGTYLGLPTIWGRSKNAALGYIKERILKKMDGWKL 162
Query: 159 KFLSTAGKEILIK 121
LS AGKE+L+K
Sbjct: 163 NTLSLAGKEVLLK 175
Score = 45.1 bits (105), Expect(3) = 2e-15
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNEAN 2
V ++P + M+ F P G C +I+S +++FWWG NE N
Sbjct: 177 VTTAVPAFPMACFRFPEGTCNQINSALASFWWGNNEEN 214
Score = 22.3 bits (46), Expect(3) = 2e-15
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 376 SGQTVNMDKSSIFF 335
SGQ ++ KSSIFF
Sbjct: 91 SGQCISSQKSSIFF 104
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 56.2 bits (134), Expect(3) = 2e-15
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGI-RLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FG+ P +++ H L GI + KYLGLP +G+ K E+F Y+V ++R + W
Sbjct: 1085 FGQKIP-TMRRQRLHRLLGIDNVRGGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWAY 1143
Query: 159 KFLSTAGKEILIK 121
+LS AGKEI+IK
Sbjct: 1144 NYLSPAGKEIVIK 1156
Score = 45.8 bits (107), Expect(3) = 2e-15
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 106 SLPVYVMSVFLLPVGLCQEISSIISNFWWG 17
+LPVY M+ FLLP +C EI+S+I+ FWWG
Sbjct: 1161 ALPVYSMNCFLLPTLICNEINSLITAFWWG 1190
Score = 25.0 bits (53), Expect(3) = 2e-15
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 376 SGQTVNMDKSSIFFWKKYP 320
SGQ +N KSSI F +K P
Sbjct: 1072 SGQKINYAKSSIIFGQKIP 1090
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 60.8 bits (146), Expect(3) = 3e-15
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSS-KYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FG + + + ++L GI+ H KYLGLP G+ K ++F Y++E +KR SW
Sbjct: 1105 FGSRVHGTTQNRLKNIL-GIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSA 1163
Query: 159 KFLSTAGKEILIKDM 115
K+LS AGKEI++K +
Sbjct: 1164 KYLSPAGKEIMLKSV 1178
Score = 43.1 bits (100), Expect(3) = 3e-15
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTN 11
V S+PVY MS F LP+ + EI +++ NFWW N
Sbjct: 1178 VAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKN 1212
Score = 22.7 bits (47), Expect(3) = 3e-15
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 379 FSGQTVNMDKSSIFF 335
+SGQ +NM KS I F
Sbjct: 1091 YSGQKINMSKSMITF 1105
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 60.8 bits (146), Expect(3) = 3e-15
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSS-KYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FG + + + ++L GI+ H KYLGLP G+ K ++F Y++E +KR SW
Sbjct: 1085 FGSRVHGTTQNRLKNIL-GIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSA 1143
Query: 159 KFLSTAGKEILIKDM 115
K+LS AGKEI++K +
Sbjct: 1144 KYLSPAGKEIMLKSV 1158
Score = 43.1 bits (100), Expect(3) = 3e-15
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTN 11
V S+PVY MS F LP+ + EI +++ NFWW N
Sbjct: 1158 VAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKN 1192
Score = 22.7 bits (47), Expect(3) = 3e-15
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 379 FSGQTVNMDKSSIFF 335
+SGQ +NM KS I F
Sbjct: 1071 YSGQKINMSKSMITF 1085
>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
Length = 615
Score = 61.2 bits (147), Expect(3) = 3e-15
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = -3
Query: 336 FGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKNK 157
F KN+ K +V L ++ KYLGLP+ +G+S+++ F Y+ + KR+Q WK +
Sbjct: 179 FSKNSTTVEKENVMAGLGIQSEARNEKYLGLPIYMGRSRSQTFSYLKDRVWKRLQGWKER 238
Query: 156 FLSTAGKEILIKDM 115
LS AGKEILIK +
Sbjct: 239 LLSKAGKEILIKSV 252
Score = 40.8 bits (94), Expect(3) = 3e-15
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2
Query: 115 VLNSLPVYVMSVFLLPVGLCQEISSIISNFWWGTNE 8
V+ S+P Y MS F L LC E+ S++ FWW E
Sbjct: 252 VVQSIPTYAMSCFDLTKTLCNELGSLVCRFWWAQQE 287
Score = 24.6 bits (52), Expect(3) = 3e-15
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 373 GQTVNMDKSSIFFWK 329
GQT+N DKS+I F K
Sbjct: 167 GQTINKDKSTIMFSK 181
>ref|XP_004308581.1| PREDICTED: uncharacterized protein LOC101295867 [Fragaria vesca
subsp. vesca]
Length = 265
Score = 60.1 bits (144), Expect(3) = 3e-15
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = -3
Query: 339 FFGKNTPDSVKTDVCHVLRGIRLHQSSKYLGLPMVIGKSKNEVFRYVVEATQKRIQSWKN 160
FF NTP + +C +L + + YLGLP V G+SK E Y+ + ++++ WK
Sbjct: 68 FFTPNTPIQMSL-MCELLGFLGVLNPGSYLGLPTVWGRSKKEALDYLFDRLKQKLDGWKQ 126
Query: 159 KFLSTAGKEILIKDM 115
K LS AGKEILIK +
Sbjct: 127 KSLSLAGKEILIKSV 141
Score = 45.8 bits (107), Expect(3) = 3e-15
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -2
Query: 106 SLPVYVMSVFLLPVGLCQEISSIISNFWWGTNE 8
++P + MS F LP+ +C EI+S++ NFWWG E
Sbjct: 144 AIPAFPMSCFKLPMSICDEINSVMGNFWWGYTE 176
Score = 20.8 bits (42), Expect(3) = 3e-15
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 376 SGQTVNMDKSSIFFWKKYP 320
S Q +N KSSIFF P
Sbjct: 56 SRQLINDGKSSIFFTPNTP 74