BLASTX nr result
ID: Rehmannia22_contig00039807
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00039807
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY22796.1| F-box family protein, putative [Theobroma cacao] 47 2e-09
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 45 3e-07
ref|XP_004238485.1| PREDICTED: F-box protein At5g07610-like [Sol... 43 4e-07
ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Cit... 42 8e-07
gb|EOY22797.1| F-box family protein [Theobroma cacao] 49 8e-07
ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citr... 42 1e-06
ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol... 40 1e-06
ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Sol... 40 2e-06
ref|XP_004305934.1| PREDICTED: F-box protein At5g07610-like [Fra... 39 2e-06
ref|XP_004304008.1| PREDICTED: F-box protein At5g07610-like isof... 39 2e-06
ref|XP_004304009.1| PREDICTED: F-box protein At5g07610-like isof... 39 2e-06
gb|AAR15502.1| F-box protein [Arabidopsis arenosa] 41 3e-06
gb|AAR15451.1| F-box protein [Arabidopsis arenosa] 41 4e-06
ref|XP_004305929.1| PREDICTED: F-box protein At5g07610-like [Fra... 39 4e-06
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub... 40 5e-06
ref|XP_006421557.1| hypothetical protein CICLE_v10005086mg [Citr... 43 8e-06
>gb|EOY22796.1| F-box family protein, putative [Theobroma cacao]
Length = 407
Score = 47.4 bits (111), Expect(2) = 2e-09
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Frame = +1
Query: 127 PQEITILNSCNGLLVCRS-----PCWTFHIYNPTTNKYSTLPEL 243
P I IL SCNGLL+C S P T++IYNPTT +Y+ LP L
Sbjct: 112 PSGIRILQSCNGLLLCCSFRANRPETTYYIYNPTTKQYTVLPGL 155
Score = 39.7 bits (91), Expect(2) = 2e-09
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 278 GMILAFDPSKSPHYKVVCV 334
G+ LAFDPSKSPHYKV+C+
Sbjct: 169 GVSLAFDPSKSPHYKVICI 187
>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
gi|297743579|emb|CBI36446.3| unnamed protein product
[Vitis vinifera]
Length = 374
Score = 44.7 bits (104), Expect(2) = 3e-07
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 64 DVLFFNKSIRKLKFTQHLCPRPQEITILNSCNGLLVCRSPCWT-----FHIYNPTTNKYS 228
D L + L F H P+ I IL SCNGL C S + ++IYNPTT +++
Sbjct: 76 DPLQTSAPFTSLTFVDH----PRGIEILQSCNGLFCCSSVDYNDSERKYYIYNPTTKQFT 131
Query: 229 TLPEL 243
TLP L
Sbjct: 132 TLPPL 136
Score = 35.4 bits (80), Expect(2) = 3e-07
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +2
Query: 269 RVRGMILAFDPSKSPHYKVVCV 334
RV G+ LAFDPSKS YKVVCV
Sbjct: 143 RVLGVNLAFDPSKSHTYKVVCV 164
>ref|XP_004238485.1| PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
Length = 410
Score = 43.1 bits (100), Expect(2) = 4e-07
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 127 PQEITILNSCNGLLVC-----RSPCWTFHIYNPTTNKYSTLPEL 243
P I IL SCNGLL+C R P +++YNPTT ++ TL L
Sbjct: 90 PYGIRILQSCNGLLLCCSFRVRGPNENYYVYNPTTQQFVTLSRL 133
Score = 36.2 bits (82), Expect(2) = 4e-07
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +2
Query: 257 EAGERVRGMILAFDPSKSPHYKVVCV 334
+ + V GM LAFDP KSP+YKV+C+
Sbjct: 138 QISKAVIGMKLAFDPWKSPNYKVICI 163
>ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
Length = 416
Score = 42.0 bits (97), Expect(2) = 8e-07
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 136 ITILNSCNGLLVCRS-----PCWTFHIYNPTTNKYSTLPEL 243
I +L SCNGLL+C S P +++YNPT +Y+ LP L
Sbjct: 124 IKVLQSCNGLLLCSSSRAYQPRRNYYVYNPTNKQYTILPRL 164
Score = 36.6 bits (83), Expect(2) = 8e-07
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 278 GMILAFDPSKSPHYKVVCV 334
G+ LAFDPSKS HYKV+CV
Sbjct: 176 GVNLAFDPSKSAHYKVICV 194
>gb|EOY22797.1| F-box family protein [Theobroma cacao]
Length = 371
Score = 48.9 bits (115), Expect(2) = 8e-07
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 6/41 (14%)
Frame = +1
Query: 136 ITILNSCNGLLVCRSPCWT------FHIYNPTTNKYSTLPE 240
I+IL SCNGLL+CRS T ++IYNPTTNKY+ LP+
Sbjct: 77 ISILQSCNGLLLCRSNRRTGEYNRNYYIYNPTTNKYTILPQ 117
Score = 29.6 bits (65), Expect(2) = 8e-07
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 281 MILAFDPSKSPHYKVVCV 334
+ILAFDPS+S +YKVV V
Sbjct: 129 VILAFDPSRSSYYKVVFV 146
>ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citrus clementina]
gi|557523416|gb|ESR34783.1| hypothetical protein
CICLE_v10005096mg [Citrus clementina]
Length = 403
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +1
Query: 136 ITILNSCNGLLVCRS-----PCWTFHIYNPTTNKYSTLPEL 243
I +L SCNGLL+C S P +++YNPT +Y+ LP L
Sbjct: 124 IKVLQSCNGLLLCSSSRAYQPRRIYYVYNPTNKQYTILPRL 164
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 278 GMILAFDPSKSPHYKVVCV 334
G+ LAFDPSKS HYKV+C+
Sbjct: 176 GVNLAFDPSKSAHYKVICI 194
>ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
Length = 403
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 269 RVRGMILAFDPSKSPHYKVVCV 334
++ G+ LAFDP KSPHYKVVCV
Sbjct: 182 KIHGISLAFDPLKSPHYKVVCV 203
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = +1
Query: 136 ITILNSCNGLLVC-----RSPCWTFHIYNPTTNKYSTLPE 240
I++L SCNGL++C R +++ NPTT Y+TLP+
Sbjct: 134 ISVLQSCNGLILCSNSPSRLAKANYYVCNPTTKHYTTLPK 173
>ref|XP_004240247.1| PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
Length = 383
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 269 RVRGMILAFDPSKSPHYKVVCV 334
++ G+ LAFDP KSPHYKV+CV
Sbjct: 158 KIHGISLAFDPLKSPHYKVICV 179
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Frame = +1
Query: 136 ITILNSCNGLLVC-----RSPCWTFHIYNPTTNKYSTLPE 240
I++L SCNGL++C R +++ NPTT Y+TLP+
Sbjct: 110 ISVLQSCNGLMLCSNSASRLAKRNYYVCNPTTKHYTTLPK 149
>ref|XP_004305934.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
vesca]
Length = 415
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +1
Query: 97 LKFTQHLCPRPQEITILNSCNGLLVCR---SPCW--TFHIYNPTTNKYSTL 234
LKF Q+ +I I+ SCNGL +CR SP + I+NPTTN++STL
Sbjct: 121 LKFAQN--QYHADIKIIQSCNGLFLCRLLYSPKQGPPYFIFNPTTNQFSTL 169
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 272 VRGMILAFDPSKSPHYKVVCV 334
V + LAFDPSKSPHYKVVC+
Sbjct: 182 VISIALAFDPSKSPHYKVVCL 202
>ref|XP_004304008.1| PREDICTED: F-box protein At5g07610-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 415
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +1
Query: 97 LKFTQHLCPRPQEITILNSCNGLLVCR---SPCW--TFHIYNPTTNKYSTL 234
LKF Q+ +I I+ SCNGL +CR SP + I+NPTTN++STL
Sbjct: 121 LKFAQN--QYHADIKIIQSCNGLFLCRLLYSPKQGPPYFIFNPTTNQFSTL 169
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 272 VRGMILAFDPSKSPHYKVVCV 334
V + LAFDPSKSPHYKVVC+
Sbjct: 182 VISIALAFDPSKSPHYKVVCL 202
>ref|XP_004304009.1| PREDICTED: F-box protein At5g07610-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 333
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +1
Query: 97 LKFTQHLCPRPQEITILNSCNGLLVCR---SPCW--TFHIYNPTTNKYSTL 234
LKF Q+ +I I+ SCNGL +CR SP + I+NPTTN++STL
Sbjct: 121 LKFAQN--QYHADIKIIQSCNGLFLCRLLYSPKQGPPYFIFNPTTNQFSTL 169
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 272 VRGMILAFDPSKSPHYKVVCV 334
V + LAFDPSKSPHYKVVC+
Sbjct: 182 VISIALAFDPSKSPHYKVVCL 202
>gb|AAR15502.1| F-box protein [Arabidopsis arenosa]
Length = 421
Score = 41.2 bits (95), Expect(2) = 3e-06
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Frame = +1
Query: 97 LKFTQHLCPRPQEITILNSCNGLLVCRSPCWT-------FHIYNPTTNKYSTLPEL 243
L FT H ++ I+ S NGLL+C+ C + +++YNPTT +Y+ LP++
Sbjct: 117 LWFTDH----QSDMIIMQSTNGLLLCKCSCASSNHFNTNYYVYNPTTKQYTLLPQI 168
Score = 35.4 bits (80), Expect(2) = 3e-06
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 287 LAFDPSKSPHYKVVCV 334
LAFDPSKSPHYKV C+
Sbjct: 176 LAFDPSKSPHYKVFCL 191
>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
Length = 421
Score = 40.8 bits (94), Expect(2) = 4e-06
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Frame = +1
Query: 97 LKFTQHLCPRPQEITILNSCNGLLVCRSPCWT-------FHIYNPTTNKYSTLPEL 243
L FT H ++ I+ S NGLL+C+ C + +++YNPTT +Y+ LP++
Sbjct: 117 LWFTDH----QTDMIIMQSTNGLLLCKCSCASSNHFNTNYYVYNPTTKQYTLLPQI 168
Score = 35.4 bits (80), Expect(2) = 4e-06
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 287 LAFDPSKSPHYKVVCV 334
LAFDPSKSPHYKV C+
Sbjct: 176 LAFDPSKSPHYKVFCL 191
>ref|XP_004305929.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
vesca]
Length = 389
Score = 39.3 bits (90), Expect(2) = 4e-06
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 272 VRGMILAFDPSKSPHYKVVCV 334
+ G LAFDPSKSPHYKV+C+
Sbjct: 160 ILGCFLAFDPSKSPHYKVICL 180
Score = 37.0 bits (84), Expect(2) = 4e-06
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 9/43 (20%)
Frame = +1
Query: 133 EITILNSCNGLLVC---------RSPCWTFHIYNPTTNKYSTL 234
+I I++SCNGL++C RSP + + NPTTN++STL
Sbjct: 109 DIYIMHSCNGLILCRPLGAPSTLRSP---YFVLNPTTNQFSTL 148
>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
gi|34013883|gb|AAQ56109.1| F box protein family
[Arabidopsis lyrata subsp. lyrata]
gi|297317116|gb|EFH47538.1| F box protein family
[Arabidopsis lyrata subsp. lyrata]
Length = 421
Score = 40.4 bits (93), Expect(2) = 5e-06
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 7/56 (12%)
Frame = +1
Query: 97 LKFTQHLCPRPQEITILNSCNGLLVCRSPCWT-------FHIYNPTTNKYSTLPEL 243
L FT H ++ I+ S NGLL+C+ C + +++YNPTT +Y+ LP++
Sbjct: 117 LWFTDH----QTDMIIMQSTNGLLLCQCSCASSNHFNTNYYVYNPTTKQYTLLPQI 168
Score = 35.4 bits (80), Expect(2) = 5e-06
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 287 LAFDPSKSPHYKVVCV 334
LAFDPSKSPHYKV C+
Sbjct: 176 LAFDPSKSPHYKVFCL 191
>ref|XP_006421557.1| hypothetical protein CICLE_v10005086mg [Citrus clementina]
gi|567857750|ref|XP_006421558.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
gi|557523430|gb|ESR34797.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
gi|557523431|gb|ESR34798.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
Length = 405
Score = 43.1 bits (100), Expect(2) = 8e-06
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Frame = +1
Query: 91 RKLKFTQHLCPRPQEITILNSCNGLLVCRS-------PCWTFHIYNPTTNKYSTLPEL 243
R L F H P + IL SCNGLL+C S PC + +YNPT++++ T+P L
Sbjct: 88 RSLTFVNH----PSGLIILQSCNGLLLCASSISDWNIPC-DYCVYNPTSHEFVTVPPL 140
Score = 32.0 bits (71), Expect(2) = 8e-06
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 272 VRGMILAFDPSKSPHYKVVCV 334
+R + LA+DP+KS H+K+VC+
Sbjct: 148 IRRIGLAYDPAKSSHFKIVCI 168