BLASTX nr result
ID: Rehmannia22_contig00039559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00039559
(375 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containi... 124 2e-26
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] 117 2e-24
gb|EOX99344.1| Pentatricopeptide repeat (PPR-like) superfamily p... 115 6e-24
ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
gb|EMJ17335.1| hypothetical protein PRUPE_ppa019108mg, partial [... 114 2e-23
ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containi... 112 4e-23
gb|ACN85255.1| EMB2261 putative [Oryza officinalis] 112 5e-23
gb|ACN85287.1| EMB2261 putative [Oryza australiensis] 112 7e-23
gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays] 110 2e-22
ref|XP_006657127.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
gb|ACN85326.1| EMB2261 putative [Oryza brachyantha] 110 2e-22
gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis] 109 3e-22
ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_002319916.2| pentatricopeptide repeat-containing family p... 109 3e-22
ref|XP_004967189.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
dbj|BAD35499.1| pentatricopeptide (PPR) repeat-containing protei... 108 9e-22
gb|ACN85213.1| EMB2261 putative [Oryza glaberrima] 108 9e-22
>ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Solanum tuberosum]
Length = 597
Score = 124 bits (311), Expect = 1e-26
Identities = 61/80 (76%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = -2
Query: 374 EFRNDPSLWAALLGAC-ATTNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSH 198
EFRND SLWA LLGAC ++TNPTVAERIAKKM+EL PDYHLSYVLLANVYRA GRW D+
Sbjct: 518 EFRNDASLWATLLGACTSSTNPTVAERIAKKMMELNPDYHLSYVLLANVYRAVGRWADAL 577
Query: 197 KIWNQMQKRGVKKIPGKSWI 138
+I QMQ++ V KI GKSWI
Sbjct: 578 EIRRQMQEKRVNKITGKSWI 597
>ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Solanum lycopersicum]
Length = 597
Score = 124 bits (310), Expect = 2e-26
Identities = 61/80 (76%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = -2
Query: 374 EFRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSH 198
EFRND SLWA LLGAC + TNPTVAERIAKKM+EL PDYHLSYVLLANVYRA GRW D+
Sbjct: 518 EFRNDASLWATLLGACTSNTNPTVAERIAKKMMELNPDYHLSYVLLANVYRAVGRWADAL 577
Query: 197 KIWNQMQKRGVKKIPGKSWI 138
+I QMQ++ V KI GKSWI
Sbjct: 578 EIRRQMQEKRVNKITGKSWI 597
>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 117 bits (292), Expect = 2e-24
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = -2
Query: 374 EFRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSH 198
+FR+D SLWAALLGAC T TN +AERIAK+++EL+PDYHLSYVLLANVY+A GRW D+
Sbjct: 524 DFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDAL 583
Query: 197 KIWNQMQKRGVKKIPGKSWIDNSS 126
+I M+ RGV K+PGKSWI+ +
Sbjct: 584 RIRRLMKDRGVNKMPGKSWIETKN 607
>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 117 bits (292), Expect = 2e-24
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = -2
Query: 374 EFRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSH 198
+FR+D SLWAALLGAC T TN +AERIAK+++EL+PDYHLSYVLLANVY+A GRW D+
Sbjct: 583 DFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDAL 642
Query: 197 KIWNQMQKRGVKKIPGKSWIDNSS 126
+I M+ RGV K+PGKSWI+ +
Sbjct: 643 RIRRLMKDRGVNKMPGKSWIETKN 666
>gb|EOX99344.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 638
Score = 115 bits (288), Expect = 6e-24
Identities = 57/95 (60%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = -2
Query: 374 EFRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSH 198
+ R+D SLWA LLGAC T T+ + AERIAKKMIE++PDYH+SYVLLANVYRA GRW D+
Sbjct: 529 DLRDDSSLWAVLLGACTTCTSSSTAERIAKKMIEVEPDYHMSYVLLANVYRAVGRWNDAL 588
Query: 197 KIWNQMQKRGVKKIPGKSWIDNSSLNPSLYVGFAD 93
+ M+ RGVKKI GKSW++ ++ N Y+ AD
Sbjct: 589 NVRKLMKDRGVKKITGKSWVE-ANTNMGSYLDVAD 622
>ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like isoform X1 [Cicer arietinum]
gi|502086668|ref|XP_004488288.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g03540-like isoform X2 [Cicer arietinum]
gi|502086671|ref|XP_004488289.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g03540-like isoform X3 [Cicer arietinum]
Length = 612
Score = 114 bits (284), Expect = 2e-23
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = -2
Query: 368 RNDPSLWAALLGACATTNPTV-AERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHKI 192
R D SLWAALLGAC N V AERIAKKMIEL+PD+HLSYVLL N+YRA GRW D+ +I
Sbjct: 521 RYDKSLWAALLGACTKCNDYVTAERIAKKMIELEPDFHLSYVLLGNIYRAVGRWDDAVEI 580
Query: 191 WNQMQKRGVKKIPGKSWIDNSS 126
M+ RGVKK+PGKSWID +
Sbjct: 581 RKLMEDRGVKKLPGKSWIDGEN 602
>gb|EMJ17335.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica]
Length = 608
Score = 114 bits (284), Expect = 2e-23
Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = -2
Query: 368 RNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHKI 192
RND SLW LLGA + +N T AERIAKKMIEL+PDYHLSYVLLANVYR+ GRW D+ +I
Sbjct: 525 RNDSSLWGVLLGASTSCSNSTTAERIAKKMIELQPDYHLSYVLLANVYRSVGRWDDALEI 584
Query: 191 WNQMQKRGVKKIPGKSWIDNSS 126
M+ RGVKK PGKSWI+++S
Sbjct: 585 GRIMKDRGVKKTPGKSWIESNS 606
>ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Fragaria vesca subsp. vesca]
Length = 658
Score = 112 bits (281), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = -2
Query: 374 EFRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSH 198
E RND SLWA LLGA + TN AERIAKKMI+L+PDYHLSYVLLANVYR+ GRW D+
Sbjct: 525 ECRNDSSLWAVLLGASTSCTNSATAERIAKKMIKLEPDYHLSYVLLANVYRSVGRWDDAV 584
Query: 197 KIWNQMQKRGVKKIPGKSWIDNSS 126
+I MQ RGVKK P KSWI++ S
Sbjct: 585 EIAKLMQDRGVKKNPAKSWIESKS 608
>gb|ACN85255.1| EMB2261 putative [Oryza officinalis]
Length = 622
Score = 112 bits (280), Expect = 5e-23
Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
FRND SLWAA+LGA AT +NP VAER+AKKM+EL+P YHLSY+LL NVYR GRW+D+ +
Sbjct: 505 FRNDSSLWAAILGASATHSNPDVAERVAKKMMELEPQYHLSYILLENVYRTVGRWEDALE 564
Query: 194 IWNQMQKRGVKKIPGKSWIDNS 129
I M+ R VKK PG SWID +
Sbjct: 565 IRRLMESRKVKKEPGMSWIDTN 586
>gb|ACN85287.1| EMB2261 putative [Oryza australiensis]
Length = 626
Score = 112 bits (279), Expect = 7e-23
Identities = 54/80 (67%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
FRND SLWAA+LGA AT +NP VAER+AKKM+EL+P YHLSY+LL NVYR GRW+D+ +
Sbjct: 509 FRNDSSLWAAILGASATHSNPDVAERVAKKMMELEPQYHLSYILLENVYRTVGRWEDALE 568
Query: 194 IWNQMQKRGVKKIPGKSWID 135
I M+ R VKK PG SWID
Sbjct: 569 IRRLMESRKVKKEPGMSWID 588
>gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays]
Length = 630
Score = 110 bits (275), Expect = 2e-22
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Frame = -2
Query: 374 EFRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSH 198
+FR+D SLWAA+LGACAT TNP VA R+AKKM+EL+P YHLSYVLL NVYR G W+D+
Sbjct: 511 QFRDDSSLWAAILGACATHTNPDVAVRVAKKMMELEPQYHLSYVLLENVYRTIGHWEDAV 570
Query: 197 KIWNQMQKRGVKKIPGKSWID 135
K+ M+ R VKK PG SWI+
Sbjct: 571 KVRKLMKSRKVKKEPGTSWIN 591
>ref|XP_006657127.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like, partial [Oryza brachyantha]
Length = 582
Score = 110 bits (274), Expect = 2e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
FR D SLWAA+LGA AT +NP VAER+AKKM+EL+P YHLSYVLL NVYR GRW+D+ +
Sbjct: 463 FRGDSSLWAAILGASATHSNPDVAERVAKKMMELQPQYHLSYVLLENVYRTVGRWEDALE 522
Query: 194 IWNQMQKRGVKKIPGKSWID 135
I M+ R VKK PG SWID
Sbjct: 523 IRRLMESRKVKKEPGMSWID 542
>ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 110 bits (274), Expect = 2e-22
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
F ND SLWAA+LGA AT +NP VAER+AKKM+EL+P YHLSY+LL NVYR GRW+D+ +
Sbjct: 505 FSNDSSLWAAILGASATQSNPDVAERVAKKMMELEPQYHLSYILLENVYRTVGRWEDASE 564
Query: 194 IWNQMQKRGVKKIPGKSWID 135
I M+ R VKK PG SWID
Sbjct: 565 IRRLMKSRKVKKDPGMSWID 584
>gb|ACN85326.1| EMB2261 putative [Oryza brachyantha]
Length = 626
Score = 110 bits (274), Expect = 2e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
FR D SLWAA+LGA AT +NP VAER+AKKM+EL+P YHLSYVLL NVYR GRW+D+ +
Sbjct: 507 FRGDSSLWAAILGASATHSNPDVAERVAKKMMELQPQYHLSYVLLENVYRTVGRWEDALE 566
Query: 194 IWNQMQKRGVKKIPGKSWID 135
I M+ R VKK PG SWID
Sbjct: 567 IRRLMESRKVKKEPGMSWID 586
>gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis]
Length = 633
Score = 109 bits (273), Expect = 3e-22
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 365 NDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHKIW 189
N+ SLWA LLGAC T TN T AERIA+KM++L+PD HLSYVLLANVYRA GRW D+ KI
Sbjct: 527 NNSSLWAVLLGACTTCTNSTTAERIAQKMMKLEPDCHLSYVLLANVYRAVGRWNDALKIR 586
Query: 188 NQMQKRGVKKIPGKSWIDNS 129
M+ RGVKK PG SWI+ +
Sbjct: 587 KLMKDRGVKKTPGMSWIETN 606
>ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Citrus sinensis]
Length = 612
Score = 109 bits (273), Expect = 3e-22
Identities = 57/88 (64%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
Frame = -2
Query: 368 RNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHKI 192
R+D SLW LLGAC T N VAER+AKK++EL+PD HLSYVLL NVYRA GRW D+ KI
Sbjct: 524 RHDSSLWEVLLGACTTFRNAHVAERVAKKIMELEPDCHLSYVLLDNVYRAVGRWNDAFKI 583
Query: 191 WNQMQKRGVKKIPGKSWID-NSSLNPSL 111
M+ GVKK+PGKSWI+ NS LN L
Sbjct: 584 RTLMKYSGVKKMPGKSWIEANSKLNHDL 611
>ref|XP_002319916.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550325822|gb|EEE95839.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 606
Score = 109 bits (273), Expect = 3e-22
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = -2
Query: 368 RNDPSLWAALLGACATT-NPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHKI 192
R++PSLW LLGACA + + AERIAKK +ELKPD+HLSYV LANVYRA GRW D+ KI
Sbjct: 527 RDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKI 586
Query: 191 WNQMQKRGVKKIPGKSWID 135
N M KRGV K+PG SWI+
Sbjct: 587 RNLMTKRGVGKMPGTSWIE 605
>ref|XP_004967189.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Setaria italica]
Length = 624
Score = 108 bits (270), Expect = 7e-22
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
FR+D SLWAA+LGACAT TNP VA R+AK M+EL+P YHLSYVLL NVYR GRW+D+ +
Sbjct: 512 FRDDSSLWAAILGACATHTNPDVAVRVAKLMMELEPRYHLSYVLLENVYRTIGRWEDAVE 571
Query: 194 IWNQMQKRGVKKIPGKSWID 135
+ M+ R VKK PG SWID
Sbjct: 572 VRELMKSRKVKKEPGTSWID 591
>dbj|BAD35499.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 665
Score = 108 bits (269), Expect = 9e-22
Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
FRND SLWA +LGA AT +NP VAER++KKM+EL+P YHLSY+LL NVYR GRW+D+ +
Sbjct: 559 FRNDSSLWADILGASATHSNPDVAERVSKKMMELEPQYHLSYILLENVYRTVGRWEDALE 618
Query: 194 IWNQMQKRGVKKIPGKSWID 135
I M+ R VKK PG SW+D
Sbjct: 619 IRRLMESRKVKKEPGMSWVD 638
>gb|ACN85213.1| EMB2261 putative [Oryza glaberrima]
Length = 615
Score = 108 bits (269), Expect = 9e-22
Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 371 FRNDPSLWAALLGACAT-TNPTVAERIAKKMIELKPDYHLSYVLLANVYRAAGRWKDSHK 195
FRND SLWA +LGA AT +NP VAER++KKM+EL+P YHLSY+LL NVYR GRW+D+ +
Sbjct: 509 FRNDSSLWADILGASATHSNPDVAERVSKKMMELEPQYHLSYILLENVYRTVGRWEDALE 568
Query: 194 IWNQMQKRGVKKIPGKSWID 135
I M+ R VKK PG SW+D
Sbjct: 569 IRRLMESRKVKKEPGMSWVD 588