BLASTX nr result
ID: Rehmannia22_contig00039490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00039490
(398 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP43919.1| integrase [Gossypium hirsutum] 167 3e-46
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 160 4e-45
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 159 2e-44
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 158 2e-44
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 160 7e-44
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761... 160 7e-44
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 158 2e-43
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 155 2e-43
emb|CAN78587.1| hypothetical protein VITISV_043910 [Vitis vinifera] 159 2e-43
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 156 6e-43
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 155 9e-43
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 155 2e-42
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 155 2e-42
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 152 2e-42
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex] 155 2e-42
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 152 3e-42
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 152 3e-42
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 152 3e-42
gb|AAP43914.1| integrase [Gossypium raimondii] 152 3e-42
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 152 4e-42
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 167 bits (423), Expect(2) = 3e-46
Identities = 73/107 (68%), Positives = 93/107 (86%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WPHMK+DVE +C++C+T KQAKS++ GL+ PLPIPT PWVD+SMDFILGL RTK+G
Sbjct: 192 FHWPHMKKDVEKVCSKCITCKQAKSKVMLHGLYTPLPIPTSPWVDLSMDFILGLPRTKKG 251
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKM+HFIPCHKTD+A+ +ADLFF+EVVRL+ +P+ +
Sbjct: 252 RDSIFVVVDRFSKMSHFIPCHKTDDATHVADLFFKEVVRLHGIPKTI 298
Score = 43.9 bits (102), Expect(2) = 3e-46
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLS+FWK GKLGTK L+
Sbjct: 298 IVSDRDVKFLSHFWKVLWGKLGTKLLY 324
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 160 bits (406), Expect(2) = 4e-45
Identities = 75/107 (70%), Positives = 88/107 (82%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WPHMKRDVE IC RC T KQAK++ Q GL+ PLPIP+ PW DISMDF++GL RT+ G
Sbjct: 1413 FHWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTG 1472
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHKTD+A IA+LFFREVVRL+ MP+ +
Sbjct: 1473 KDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTI 1519
Score = 46.6 bits (109), Expect(2) = 4e-45
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLSYFWKT KLGTK LF
Sbjct: 1519 IVSDRDTKFLSYFWKTLWSKLGTKLLF 1545
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 159 bits (401), Expect(2) = 2e-44
Identities = 73/107 (68%), Positives = 87/107 (81%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
FYWPHMK+DV CTRCV QAKSR+ GL++PLPIP+ PWVDISMDF+LGL RT++G
Sbjct: 1269 FYWPHMKKDVHKHCTRCVACLQAKSRVMPHGLYIPLPIPSTPWVDISMDFVLGLPRTQRG 1328
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK D+A I+ LFF+EVVRL+ +PR +
Sbjct: 1329 VDSIFVVVDRFSKMAHFIPCHKVDDAFHISKLFFKEVVRLHGLPRTI 1375
Score = 46.2 bits (108), Expect(2) = 2e-44
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FWKT KLGTK LF
Sbjct: 1375 IVSDRDAKFLSHFWKTLWAKLGTKLLF 1401
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 158 bits (399), Expect(2) = 2e-44
Identities = 74/107 (69%), Positives = 86/107 (80%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WPHMKRDVE +C RC T KQAK++ Q GL PLPIP PW DISMDF++GL RT+ G
Sbjct: 788 FHWPHMKRDVERMCERCTTCKQAKAKSQPHGLCTPLPIPLHPWNDISMDFVVGLPRTRTG 847
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHKTD+A IA+LFFREVVRL+ MP+ +
Sbjct: 848 KDSIFVVVDRFSKMAHFIPCHKTDDAMHIANLFFREVVRLHGMPKTI 894
Score = 46.6 bits (109), Expect(2) = 2e-44
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLSYFWKT KLGTK LF
Sbjct: 894 IVSDRDTKFLSYFWKTLWSKLGTKLLF 920
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 160 bits (405), Expect(2) = 7e-44
Identities = 70/107 (65%), Positives = 89/107 (83%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+ DVE + RC T ++AKSR+ N GL+MPLP+PT PW+DISMDF+LGL RTK+G
Sbjct: 510 FFWPRMRADVERLVARCTTCQKAKSRLNNHGLYMPLPVPTSPWLDISMDFVLGLPRTKKG 569
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHKTD+AS +A+LFFRE++RL+ +P +
Sbjct: 570 RDSIFVVVDRFSKMAHFIPCHKTDDASNVAELFFREIIRLHGIPNTI 616
Score = 42.7 bits (99), Expect(2) = 7e-44
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FW++ K+GTK LF
Sbjct: 616 IVSDRDAKFLSHFWRSLWNKMGTKLLF 642
>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
italica]
Length = 738
Score = 160 bits (405), Expect(2) = 7e-44
Identities = 70/107 (65%), Positives = 89/107 (83%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+ DVE + RC T ++AKSR+ N GL+MPLP+PT PW+DISMDF+LGL RTK+G
Sbjct: 485 FFWPRMRADVERLVARCTTCQKAKSRLNNHGLYMPLPVPTSPWLDISMDFVLGLPRTKKG 544
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHKTD+AS +A+LFFRE++RL+ +P +
Sbjct: 545 RDSIFVVVDRFSKMAHFIPCHKTDDASNVAELFFREIIRLHGIPNTI 591
Score = 42.7 bits (99), Expect(2) = 7e-44
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FW++ K+GTK LF
Sbjct: 591 IVSDRDAKFLSHFWRSLWNKMGTKLLF 617
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 158 bits (399), Expect(2) = 2e-43
Identities = 72/107 (67%), Positives = 87/107 (81%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDV RC T ++AKSR+ GL+MPLP+PT+PW DISMDF+LGL RTK+G
Sbjct: 1222 FFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRG 1281
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHKTD+AS IADLFFRE+VRL+ +P +
Sbjct: 1282 RDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTI 1328
Score = 43.5 bits (101), Expect(2) = 2e-43
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLS+FW+T KLGTK LF
Sbjct: 1328 IVSDRDTKFLSHFWRTLWAKLGTKLLF 1354
Score = 79.7 bits (195), Expect(2) = 6e-17
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQ-GLHMPLPIPTMPWVDISMDFILGLSRTKQ 222
++W MKR++ C ++ K+ Q GL PL +P W +I MDFI GL +T+
Sbjct: 2043 YWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQG 2102
Query: 221 GSDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPR 84
G D I+VVVD +K+A FIP T + +A+L+F +V L+ +P+
Sbjct: 2103 GYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPK 2148
Score = 33.1 bits (74), Expect(2) = 6e-17
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD++++F S+FWK + +LGT+ F
Sbjct: 2150 IVSDRESQFTSHFWKKLQEELGTRLNF 2176
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 155 bits (393), Expect(2) = 2e-43
Identities = 69/107 (64%), Positives = 88/107 (82%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDVE RC T ++AKSR+ GL+MPLP+P++PW DISMDF+LGL RTK+G
Sbjct: 1250 FFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 1309
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK+D+A+ +ADLFFRE+VRL+ +P +
Sbjct: 1310 RDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTI 1356
Score = 45.8 bits (107), Expect(2) = 2e-43
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLS+FW+T KLGTKFLF
Sbjct: 1356 IVSDRDTKFLSHFWRTLWAKLGTKFLF 1382
>emb|CAN78587.1| hypothetical protein VITISV_043910 [Vitis vinifera]
Length = 565
Score = 159 bits (401), Expect(2) = 2e-43
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
FYW HMKRDVE IC RCVT +QAKSR+Q GL+ PL IP+ PW+DIS+DF+LGL R+K G
Sbjct: 427 FYWSHMKRDVERICGRCVTCRQAKSRVQPHGLYXPLXIPSEPWIDISIDFVLGLPRSKCG 486
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FS M HFIPCHK DN S + DLFFRE++RL+ MPR +
Sbjct: 487 RDSIFVVVDRFSMMTHFIPCHKXDNVSHVVDLFFREIIRLHGMPRTI 533
Score = 42.7 bits (99), Expect(2) = 2e-43
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVS++DAK LSYFWKT KLGTK LF
Sbjct: 533 IVSNRDAKLLSYFWKTLWCKLGTKLLF 559
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 156 bits (395), Expect(2) = 6e-43
Identities = 71/107 (66%), Positives = 86/107 (80%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDV RC T ++AKSR+ GL+MPLP+PT+PW DISMDF+LGL RTK+G
Sbjct: 1201 FFWPQMRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRG 1260
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKM HFIPCHKTD+AS IADLFFRE+VRL+ +P +
Sbjct: 1261 RDSIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTI 1307
Score = 43.5 bits (101), Expect(2) = 6e-43
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLS+FW+T KLGTK LF
Sbjct: 1307 IVSDRDTKFLSHFWRTLWAKLGTKLLF 1333
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 155 bits (393), Expect(2) = 9e-43
Identities = 69/107 (64%), Positives = 88/107 (82%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDVE RC T ++AKSR+ GL+MPLP+P++PW DISMDF+LGL RTK+G
Sbjct: 563 FFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 622
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK+D+A+ +ADLFFRE+VRL+ +P +
Sbjct: 623 RDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTI 669
Score = 43.5 bits (101), Expect(2) = 9e-43
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLS+FW+T KLGTK LF
Sbjct: 669 IVSDRDTKFLSHFWRTLWAKLGTKLLF 695
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 155 bits (393), Expect(2) = 2e-42
Identities = 68/107 (63%), Positives = 88/107 (82%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDVE RC T ++AKSR+ GL+MPLP+P++PW DISMDF+LGL RTK+G
Sbjct: 1281 FFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 1340
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK+D+A+ +ADLFFRE++RL+ +P +
Sbjct: 1341 RDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTI 1387
Score = 42.7 bits (99), Expect(2) = 2e-42
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FW+ KLGTK LF
Sbjct: 1387 IVSDRDAKFLSHFWRCLWAKLGTKLLF 1413
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 155 bits (393), Expect(2) = 2e-42
Identities = 68/107 (63%), Positives = 88/107 (82%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDVE RC T ++AKSR+ GL+MPLP+P++PW DISMDF+LGL RTK+G
Sbjct: 1278 FFWPRMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 1337
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK+D+A+ +ADLFFRE++RL+ +P +
Sbjct: 1338 RDSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTI 1384
Score = 42.7 bits (99), Expect(2) = 2e-42
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FW+ KLGTK LF
Sbjct: 1384 IVSDRDAKFLSHFWRCLWAKLGTKLLF 1410
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 152 bits (383), Expect(2) = 2e-42
Identities = 65/105 (61%), Positives = 82/105 (78%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WPHM+RDV C C+ KQAKS+++ GL+ PLP+P PW DISMDF+LGL +TK G
Sbjct: 819 FFWPHMRRDVHKFCGHCIVCKQAKSKVKPHGLYTPLPVPEYPWTDISMDFVLGLPKTKNG 878
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPR 84
D +FVVVD FSKMAHFIPC K D+A +ADLFF+E+VRL+ +PR
Sbjct: 879 KDSVFVVVDRFSKMAHFIPCKKVDDACHVADLFFKEIVRLHGLPR 923
Score = 46.6 bits (109), Expect(2) = 2e-42
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FW+T GK+GTK LF
Sbjct: 925 IVSDRDAKFLSHFWRTLWGKIGTKLLF 951
>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
Length = 227
Score = 155 bits (393), Expect(2) = 2e-42
Identities = 70/104 (67%), Positives = 87/104 (83%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDVE RC T ++AKSR+ GL+MPLP+P++PW DISMDF+LGL RTK+G
Sbjct: 38 FFWPKMRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKG 97
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMP 87
D IFVVVD FSKMAHFIPCHK+D+A+ IADLFFREV+RL+ +P
Sbjct: 98 RDSIFVVVDRFSKMAHFIPCHKSDDATNIADLFFREVIRLHGVP 141
Score = 42.4 bits (98), Expect(2) = 2e-42
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKF S+FW+T KLGTK LF
Sbjct: 144 IVSDRDAKFPSHFWRTLWAKLGTKLLF 170
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 152 bits (384), Expect(2) = 3e-42
Identities = 69/107 (64%), Positives = 86/107 (80%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
FYWP M+RDV+ + RCVT +AKS++ GL+ PLP+P+ PW DISMDF+LGL RTK+G
Sbjct: 1225 FYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRG 1284
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK+D+AS IA LFF E+VRL+ MP+ +
Sbjct: 1285 RDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTI 1331
Score = 45.4 bits (106), Expect(2) = 3e-42
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLSYFWKT KLGT+ LF
Sbjct: 1331 IVSDRDTKFLSYFWKTLWAKLGTRLLF 1357
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 152 bits (384), Expect(2) = 3e-42
Identities = 69/107 (64%), Positives = 86/107 (80%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
FYWP M+RDV+ + RCVT +AKS++ GL+ PLP+P+ PW DISMDF+LGL RTK+G
Sbjct: 193 FYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRG 252
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK+D+AS IA LFF E+VRL+ MP+ +
Sbjct: 253 RDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTI 299
Score = 45.4 bits (106), Expect(2) = 3e-42
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLSYFWKT KLGT+ LF
Sbjct: 299 IVSDRDTKFLSYFWKTLWAKLGTRLLF 325
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 152 bits (384), Expect(2) = 3e-42
Identities = 69/107 (64%), Positives = 86/107 (80%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
FYWP M+RDV+ + RCVT +AKS++ GL+ PLP+P+ PW DISMDF+LGL RTK+G
Sbjct: 193 FYWPKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRG 252
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHK+D+AS IA LFF E+VRL+ MP+ +
Sbjct: 253 RDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTI 299
Score = 45.4 bits (106), Expect(2) = 3e-42
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+D KFLSYFWKT KLGT+ LF
Sbjct: 299 IVSDRDTKFLSYFWKTLWAKLGTRLLF 325
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 152 bits (384), Expect(2) = 3e-42
Identities = 68/107 (63%), Positives = 86/107 (80%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
FYWP+M++ VE IC+ C+T KQ KS + GL+ PLP+P+ PW DIS+DF++GL TK G
Sbjct: 192 FYWPNMRKLVEKICSTCITCKQDKSTVMPHGLYTPLPVPSSPWTDISIDFVIGLPITKHG 251
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D IFVVVD FSKMAHFIPCHKTD+A+ +ADLFFREVVRL+ +PR +
Sbjct: 252 RDSIFVVVDRFSKMAHFIPCHKTDDATHVADLFFREVVRLHGIPRTI 298
Score = 45.4 bits (106), Expect(2) = 3e-42
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FWK GKLGTK L+
Sbjct: 298 IVSDRDAKFLSHFWKVLWGKLGTKLLY 324
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 152 bits (384), Expect(2) = 4e-42
Identities = 67/107 (62%), Positives = 87/107 (81%)
Frame = -1
Query: 398 FYWPHMKRDVECICTRCVTYKQAKSRIQNQGLHMPLPIPTMPWVDISMDFILGLSRTKQG 219
F+WP M+RDV + RC T ++AKSR+ GL++PLP+P+ PW DISMDF+LGL RT++G
Sbjct: 1225 FFWPKMRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKG 1284
Query: 218 SDFIFVVVDHFSKMAHFIPCHKTDNASLIADLFFREVVRLYCMPRIL 78
D +FVVVD FSKMAHFIPCHKTD+A+ IADLFFRE+VRL+ +P +
Sbjct: 1285 RDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTI 1331
Score = 45.1 bits (105), Expect(2) = 4e-42
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 81 IVSDKDAKFLSYFWKTWRGKLGTKFLF 1
IVSD+DAKFLS+FW+T KLGTK LF
Sbjct: 1331 IVSDRDAKFLSHFWRTLWAKLGTKLLF 1357