BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00039335
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       175   5e-42
ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213...   175   6e-42
gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo...   173   2e-41
ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203...   173   2e-41
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   168   8e-40
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   156   3e-36
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     153   2e-35
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   152   4e-35
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   152   6e-35
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   150   1e-34
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   150   2e-34
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     150   2e-34
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...   149   5e-34
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc...   149   5e-34
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   147   1e-33
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     147   1e-33
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   144   2e-32
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     144   2e-32
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]         142   3e-32
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   140   2e-31

>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  175 bits (444), Expect = 5e-42
 Identities = 83/139 (59%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TKR F+ KG RAK PLELVHSD+CGPM  +ARGG+EYF++FIDD+SR+G+VYL+H KS 
Sbjct: 485 MTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLHHKSE 544

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTP-QHGI 61
                         ++GK++K+LRSDRGGEY+D++F+DY +E GI  QL+A  TP Q+G+
Sbjct: 545 SFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQNGV 604

Query: 60  AERRNQTLLDMVKSMMSYA 4
           +ERRN+TLLDMV+SMMSYA
Sbjct: 605 SERRNRTLLDMVRSMMSYA 623


>ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus]
          Length = 513

 Score =  175 bits (443), Expect = 6e-42
 Identities = 83/139 (59%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TKR F+ KG RAK PLELVHSD+CGPM  +ARGG+EYF++FIDDYSR+G++YL+H KS 
Sbjct: 256 MTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSN 315

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTP-QHGI 61
                         +LGK++K LRSDRGGEY+D  F+DY +E GI  QL+A  TP Q+G+
Sbjct: 316 SLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGV 375

Query: 60  AERRNQTLLDMVKSMMSYA 4
           +ERRNQTLLDMV+SMMS++
Sbjct: 376 SERRNQTLLDMVRSMMSFS 394


>gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 414

 Score =  173 bits (439), Expect = 2e-41
 Identities = 83/140 (59%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+AKG RA EPL+L+HSDVCG +  Q RG +EY+ TFIDDYSR+GYVYLM RKS 
Sbjct: 1   MTKMPFTAKGVRATEPLQLIHSDVCGLLNVQVRGAYEYYATFIDDYSRYGYVYLMQRKSE 60

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTP-QHGI 61
                        KQLGK +K+ RSDR GEY+D EF+D+ +E+G++ QLTA GTP Q+G+
Sbjct: 61  TFGKFREFRAEVEKQLGKPIKTPRSDREGEYMDQEFRDFLIEEGVVSQLTAPGTPQQNGV 120

Query: 60  AERRNQTLLDMVKSMMSYAT 1
           AERRN+TLLDM++SM+SY++
Sbjct: 121 AERRNRTLLDMIRSMLSYSS 140


>ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203928, partial [Cucumis
           sativus]
          Length = 486

 Score =  173 bits (438), Expect = 2e-41
 Identities = 82/139 (58%), Positives = 107/139 (76%), Gaps = 1/139 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TKR F+ KG RAK PLELVHSD+CGPM  +ARGG+EYF++FIDDYSR+G++YL+H KS 
Sbjct: 283 MTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSN 342

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTP-QHGI 61
                         +LGK++K LRSDRGGEY+D  F+DY +E GI  QL+A  TP Q+G+
Sbjct: 343 SLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFQDYLIENGIKSQLSAPSTPQQNGV 402

Query: 60  AERRNQTLLDMVKSMMSYA 4
           +ERRN+TLLDMV+SMMS++
Sbjct: 403 SERRNRTLLDMVRSMMSFS 421


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  168 bits (425), Expect = 8e-40
 Identities = 82/139 (58%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
 Frame = -2

Query: 417  ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
            +TKRPF  KGNRA + LEL+HSD+CGPM+ QARGGFEYFVTF DDYSR+GY+YL+ RKS 
Sbjct: 804  MTKRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTDDYSRYGYIYLLCRKSE 863

Query: 237  XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTP-QHGI 61
                         ++ GK +K+LRSD GGEY+  EF  +  EQGI  QL+A G P Q+G+
Sbjct: 864  CFEKFKAFKAEMEQRHGKYIKTLRSDHGGEYISREFITFLSEQGITSQLSAPGMPQQNGV 923

Query: 60   AERRNQTLLDMVKSMMSYA 4
            AERRN+TL++MV+SMMSY+
Sbjct: 924  AERRNRTLMEMVRSMMSYS 942


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  156 bits (394), Expect = 3e-36
 Identities = 76/138 (55%), Positives = 98/138 (71%), Gaps = 1/138 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+    RA + L L+H+DVCGPM+T ARG ++YF+TF DD+SR+GYVYLM  KS 
Sbjct: 124 MTKAPFTGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSK 183

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                         Q GKS+K+LRSDRGGEY+   F D+  E GI+ QLT  GTPQ +G+
Sbjct: 184 SFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGV 243

Query: 60  AERRNQTLLDMVKSMMSY 7
           +ERRN+TLLDMV+SMMS+
Sbjct: 244 SERRNRTLLDMVRSMMSH 261


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  153 bits (387), Expect = 2e-35
 Identities = 75/137 (54%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+    RA + L LVH+DVCGPM++ ARGG++YF+TF DD+SR+GY+YLM  KS 
Sbjct: 480 MTKAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSE 539

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEYV  EF ++  + GI+ QLT  GTPQ +G+
Sbjct: 540 SFEKFKEFQNEVQNHLGKTIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGV 599

Query: 60  AERRNQTLLDMVKSMMS 10
           +ERRN+TLLDMV+SMMS
Sbjct: 600 SERRNRTLLDMVRSMMS 616


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  152 bits (384), Expect = 4e-35
 Identities = 74/137 (54%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA + L L+H+DVCGPM+T ARGGF+YF+TF DDYSR+GY+YLM  KS 
Sbjct: 568 MTKTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFITFTDDYSRYGYIYLMRHKSE 627

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                         QLGK++KSLRSDRGGE++  EF ++  + GI+ QLT   TPQ +G+
Sbjct: 628 SFEKFKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHLKQCGIVPQLTPPSTPQWNGV 687

Query: 60  AERRNQTLLDMVKSMMS 10
           +ER N+TLLDMV+ MMS
Sbjct: 688 SERCNRTLLDMVRLMMS 704


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score =  152 bits (383), Expect = 6e-35
 Identities = 76/137 (55%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  +A E L LVH+DVCGPM++ ARGGF YF+TF +D+SR+GYVYLM  KS 
Sbjct: 365 MTKAPFTGQSEKASELLGLVHTDVCGPMSSTARGGFGYFITFTNDFSRYGYVYLMRHKSD 424

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  EF ++  E GI+ QLT  GTPQ +G+
Sbjct: 425 SFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGV 484

Query: 60  AERRNQTLLDMVKSMMS 10
           +ERRN+TLLDMV+SMMS
Sbjct: 485 SERRNRTLLDMVRSMMS 501


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  150 bits (380), Expect = 1e-34
 Identities = 77/137 (56%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF TF DD+SR+GYVYLM  KS 
Sbjct: 456 MTKAPFTGQSERASELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVYLMRHKSE 515

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  EF ++  E GI+ QLT  GTPQ +G+
Sbjct: 516 SFEKFKEFHNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGV 575

Query: 60  AERRNQTLLDMVKSMMS 10
           +E RN+TLLDMV+SMMS
Sbjct: 576 SEWRNRTLLDMVRSMMS 592


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  150 bits (378), Expect = 2e-34
 Identities = 76/137 (55%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF DD+S++GYVYLM  KS 
Sbjct: 532 MTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSE 591

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  EF ++  E GI+ QLT  GTPQ + +
Sbjct: 592 SFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAV 651

Query: 60  AERRNQTLLDMVKSMMS 10
           +ERRN+TLLDMV+SMMS
Sbjct: 652 SERRNRTLLDMVRSMMS 668


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  150 bits (378), Expect = 2e-34
 Identities = 76/137 (55%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF DD+S++GYVYLM  KS 
Sbjct: 459 MTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSE 518

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  EF ++  E GI+ QLT  GTPQ + +
Sbjct: 519 SFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAV 578

Query: 60  AERRNQTLLDMVKSMMS 10
           +ERRN+TLLDMV+SMMS
Sbjct: 579 SERRNRTLLDMVRSMMS 595


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  149 bits (375), Expect = 5e-34
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           ITK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+ F DD+SR+GYVYLM  KS 
Sbjct: 29  ITKAPFTGQSERASELLRLVHTDVCGPMSSTARGGFGYFIIFTDDFSRYGYVYLMRHKSE 88

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          L K++K LRSDRGGEY   EF ++  E GI+ QLT  GTPQ +G+
Sbjct: 89  SFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNGV 148

Query: 60  AERRNQTLLDMVKSMMS 10
           ++RRN+TLLDMV+SMMS
Sbjct: 149 SKRRNRTLLDMVRSMMS 165


>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score =  149 bits (375), Expect = 5e-34
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           ITK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+ F DD+SR+GYVYLM  KS 
Sbjct: 29  ITKAPFTGQSERASELLRLVHTDVCGPMSSTARGGFGYFIIFTDDFSRYGYVYLMRHKSE 88

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          L K++K LRSDRGGEY   EF ++  E GI+ QLT  GTPQ +G+
Sbjct: 89  SFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNGV 148

Query: 60  AERRNQTLLDMVKSMMS 10
           ++RRN+TLLDMV+SMMS
Sbjct: 149 SKRRNRTLLDMVRSMMS 165


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  147 bits (372), Expect = 1e-33
 Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF D++SR+GYVYLM  KS 
Sbjct: 445 MTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSE 504

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  E+ ++  E GI+ QLT  GTPQ + +
Sbjct: 505 SFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAV 564

Query: 60  AERRNQTLLDMVKSMMS 10
           +ERRN+ LLDMV+SMMS
Sbjct: 565 SERRNRILLDMVRSMMS 581


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  147 bits (372), Expect = 1e-33
 Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF D++SR+GYVYLM  KS 
Sbjct: 358 MTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSE 417

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  E+ ++  E GI+ QLT  GTPQ + +
Sbjct: 418 SFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAV 477

Query: 60  AERRNQTLLDMVKSMMS 10
           +ERRN+ LLDMV+SMMS
Sbjct: 478 SERRNRILLDMVRSMMS 494


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  144 bits (362), Expect = 2e-32
 Identities = 73/132 (55%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF DD+SR GYVYLM  KS 
Sbjct: 572 MTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSE 631

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  EF ++  E GI+ QLT  GTPQ +G+
Sbjct: 632 SVEKFKKFQNEEQNYLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGV 691

Query: 60  AERRNQTLLDMV 25
           +ERRN+TLLDM+
Sbjct: 692 SERRNRTLLDML 703


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  144 bits (362), Expect = 2e-32
 Identities = 73/132 (55%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF DD+SR GYVYLM  KS 
Sbjct: 572 MTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSE 631

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  EF ++  E GI+ QLT  GTPQ +G+
Sbjct: 632 SVEKFKKFQNEEQNYLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGV 691

Query: 60  AERRNQTLLDMV 25
           +ERRN+TLLDM+
Sbjct: 692 SERRNRTLLDML 703


>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score =  142 bits (359), Expect = 3e-32
 Identities = 74/137 (54%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417 ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
           +TK PF+ +  R+ E L LVH DVC PM++ ARGGF YF+TF DD+SR+ YVYLM  KS 
Sbjct: 274 MTKAPFTGQSERSSELLGLVHIDVCEPMSSTARGGFGYFITFTDDFSRYVYVYLMRHKSE 333

Query: 237 XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                          LGK++K LRSDRGGEY+  EF ++  E GI+ QLT  GTPQ + +
Sbjct: 334 SFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNRV 393

Query: 60  AERRNQTLLDMVKSMMS 10
           +ERRN+TLLDMV+SMMS
Sbjct: 394 SERRNRTLLDMVQSMMS 410


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/137 (52%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
 Frame = -2

Query: 417  ITKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSX 238
            +TK PF+ +  R  E L LVH+DVCGPM++ AR GF YF+TF DD+SR+GYVYLM  KS 
Sbjct: 956  MTKAPFTGQSERTSELLVLVHTDVCGPMSSTARCGFGYFITFTDDFSRYGYVYLMRHKSE 1015

Query: 237  XXXXXXXXXXXXXKQLGKSLKSLRSDRGGEYVDTEFKDYFLEQGILYQLTASGTPQ-HGI 61
                           L K++K LRSD GGEY+  EF ++    GI+ QLT  GTPQ +G+
Sbjct: 1016 SFEKFKEFQNEVQNHLRKTIKYLRSDHGGEYLSLEFGNHLKGCGIVPQLTPPGTPQWNGV 1075

Query: 60   AERRNQTLLDMVKSMMS 10
            +ERRN+TLL+MV+SMMS
Sbjct: 1076 SERRNRTLLNMVRSMMS 1092