BLASTX nr result

ID: Rehmannia22_contig00039132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00039132
         (476 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY17726.1| RING/U-box superfamily protein, putative [Theobro...    57   3e-06
ref|XP_006338819.1| PREDICTED: RING-H2 finger protein ATL66-like...    56   6e-06

>gb|EOY17726.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 234

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/75 (37%), Positives = 35/75 (46%)
 Frame = -3

Query: 231 SQPFRWQYDGFDEGDFRIRGRTXXXXXXXXXXXXVATFLFIYTRWICRVXXXXXXXXXST 52
           SQPF W Y   ++ DF+IRGRT            V T +F+Y+RWIC            T
Sbjct: 7   SQPFHWHYAELEDRDFQIRGRTLFFIIVLFSFVLVFTLIFVYSRWICSFHRDNSSTRSPT 66

Query: 51  NHLAQDPPPPRGGLD 7
           +H    P P   GLD
Sbjct: 67  SHAPPQPRPEPRGLD 81


>ref|XP_006338819.1| PREDICTED: RING-H2 finger protein ATL66-like [Solanum tuberosum]
          Length = 188

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/114 (28%), Positives = 50/114 (43%)
 Frame = -3

Query: 348 PFIITYQI*SRLIASDNIQRLHIINNNYFSIIMSTQQITSQPFRWQYDGFDEGDFRIRGR 169
           PF + Y   + ++ +   + + I  NN  S + S+Q   S  F W++  FD+ DF+IRG 
Sbjct: 4   PFHVIYN--TTVLTTHAFRSIPISPNNISSTMASSQD--SHSFHWEFSEFDDNDFQIRGH 59

Query: 168 TXXXXXXXXXXXXVATFLFIYTRWICRVXXXXXXXXXSTNHLAQDPPPPRGGLD 7
           T            +AT  F+Y RWI +           +      PPP   GLD
Sbjct: 60  TLFFVILLFTIIVIATLFFLYARWINKFRSPSTTDPVGSGTSVHTPPPAPQGLD 113