BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00038897
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534128.1| conserved hypothetical protein [Ricinus comm...    80   4e-13
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    79   8e-13
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    76   5e-12
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    71   1e-10
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    70   4e-10
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    67   2e-09
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ...    65   9e-09
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    64   3e-08
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    62   6e-08
ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    57   2e-06
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    57   3e-06
ref|XP_004512848.1| PREDICTED: uncharacterized protein LOC101501...    56   4e-06
ref|NP_001173091.1| Os02g0636500 [Oryza sativa Japonica Group] g...    56   4e-06
gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japo...    56   4e-06
gb|AAK09240.1|AC084320_27 putative reverse transcriptase [Oryza ...    56   4e-06
gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indi...    55   7e-06
gb|AGC78964.1| OR143 (mitochondrion) [Vicia faba] gi|442803256|g...    55   1e-05
emb|CAH67349.1| OSIGBa0130B08.9 [Oryza sativa Indica Group]            55   1e-05

>ref|XP_002534128.1| conserved hypothetical protein [Ricinus communis]
           gi|223525813|gb|EEF28256.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 45/111 (40%), Positives = 58/111 (52%)
 Frame = -2

Query: 337 PSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFNYVCXXX 158
           PS  +YAD+I+I   AS +N R L  I  +Y  +SGQ  N  KS+++ G     +     
Sbjct: 10  PSQFLYADEILIFGKASISNIRLLAHIFAIYGSLSGQMVNWEKSQIFLGAPICQWRSSQL 69

Query: 157 XXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSM 5
                   G+ P  YLG  +FKGAPK   LQ I DKI  K   WKG+ LSM
Sbjct: 70  PQVSDMKLGSLPFTYLGIHLFKGAPKSIHLQSIADKIYSKMEGWKGSLLSM 120


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 44/129 (34%), Positives = 66/129 (51%)
 Frame = -2

Query: 388 VTWNQLQPFMAPKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRK 209
           V+  Q++   +P+  + PS +++A D+++ C  +  N   ++     Y  +SGQ  N  K
Sbjct: 166 VSSGQVKRIHSPRGTLSPSYVLFAGDVIVFCRGNRQNLLRVMSFFYEYGSVSGQIINKDK 225

Query: 208 SKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRR 29
           S+V+ G    N              G  P +YLGAPIF G P+VA  Q I DK+ LK   
Sbjct: 226 SQVFIGKH--NRRRHSISDCLGIPLGTAPFMYLGAPIFHGKPRVAHFQAIVDKVRLKLSS 283

Query: 28  WKGTSLSMA 2
           W G+ LSMA
Sbjct: 284 WVGSFLSMA 292


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = -2

Query: 358 APKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGN--- 188
           A +    P    Y DD+++ C A  ++   L  + T YAD SGQ  N RKS ++ G    
Sbjct: 416 ASRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSFIFAGGITD 475

Query: 187 -RAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSL 11
            R  N V            G+ P  YLGAPIFKG PK    QPI DK+  K  +WK + L
Sbjct: 476 TRMNNIV-----NILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLL 530

Query: 10  SMA 2
           S+A
Sbjct: 531 SIA 533


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 40/111 (36%), Positives = 56/111 (50%)
 Frame = -2

Query: 337 PSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFNYVCXXX 158
           P+ I+YADD++I C  +  N R L++    Y+++S Q  N  KS+ Y G    ++     
Sbjct: 151 PTHILYADDVLIFCAGTKQNIRCLLKFFNDYSEVSAQIINNNKSQFYAGAMTTSH-SQMI 209

Query: 157 XXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSM 5
                      P  YLG PIFKG  K    Q I D+I +KF  WK T LS+
Sbjct: 210 AGTLGFSADNIPFFYLGCPIFKGKLKGIYFQSIVDRIKVKFAIWKCTLLSI 260


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 39/105 (37%), Positives = 56/105 (53%)
 Frame = -2

Query: 391 AVTWNQLQPFMAPKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPR 212
           A T  QL P    + + FP+ I+YADD++I C  +  N R LI+I + Y+++SGQ  N  
Sbjct: 670 AATDGQLIPMSYCRGVSFPTHILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNA 729

Query: 211 KSKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKV 77
           KS+ +F +                  G+ P  YLG PIF+G PKV
Sbjct: 730 KSR-FFTSAMTGSRVQMISSLLGFNVGSLPFTYLGCPIFRGKPKV 773


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/116 (31%), Positives = 52/116 (44%)
 Frame = -2

Query: 355 PKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFN 176
           PK     S + YADD ++ C   + + R +I IL  Y  +SGQ  N  KS +Y   +  N
Sbjct: 540 PKWSPVVSHLSYADDTILFCSGQTTSMRKMINILRGYEKVSGQMINLDKSMIYLHKQVPN 599

Query: 175 YVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLS 8
            VC           G+FP  YLG PIF G       + +  K+  +   W+   +S
Sbjct: 600 RVCNLVKRITGIRQGSFPFTYLGCPIFYGRKNKGHFENLLKKVSNRMNTWQNKLMS 655


>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
            gi|355506597|gb|AES87739.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1641

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 39/86 (45%), Positives = 47/86 (54%)
 Frame = -2

Query: 268  LIQILTLYADISGQAFNPRKSKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKG 89
            L+Q+L  YA ISGQ  NP KS VY+G+ +   +            G+ P  YLG PIFKG
Sbjct: 1557 LMQLLQEYAAISGQHINPSKSTVYYGSISVAII-DHISNMIGFNKGSLPFNYLGVPIFKG 1615

Query: 88   APKVADLQPIFDKIILKFRRWKGTSL 11
             PK   LQPI DKI  K   WK + L
Sbjct: 1616 KPKRIHLQPIADKIKSKLSAWKASPL 1641


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/109 (36%), Positives = 49/109 (44%)
 Frame = -2

Query: 328 IMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFNYVCXXXXXX 149
           ++YADD+ I C   + + R L   L  Y   SGQ  N  KS  Y G   F+         
Sbjct: 125 VLYADDLFIFCRGDTKSLRQLQSFLDNYGAASGQLVNKDKSTFYLGASHFHRRHQVKKIL 184

Query: 148 XXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSMA 2
                 + P  YLG PIFKG P    LQ + DK   +   WKG  LSMA
Sbjct: 185 GFKLGTS-PFSYLGVPIFKGKPCRKHLQALVDKAKARLAGWKGKLLSMA 232


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
 Frame = -2

Query: 388 VTWNQLQPFMAPKRIVFPSSIMYADDIVIMC--GASSANARSLIQILTLYADISGQAFNP 215
           V   +L+     +  + PS I+YADDI+I C  G S A  + LI ++          FN 
Sbjct: 345 VEQGKLKQMRGTRNCLVPSHILYADDIMIFCNGGISDARLQQLINVI---------GFN- 394

Query: 214 RKSKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKF 35
                                      G+FP  YLG PIFKG PK   LQPI DKI  K 
Sbjct: 395 --------------------------KGSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKL 428

Query: 34  RRWKGTSLSMA 2
             WK + LS+A
Sbjct: 429 SNWKASILSIA 439


>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
           gi|223537826|gb|EEF39443.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/117 (30%), Positives = 54/117 (46%)
 Frame = -2

Query: 352 KRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFNY 173
           + +  P  + YA+D++I    + +N   + ++   Y  I GQ  N  KS+V         
Sbjct: 58  RNVSCPPHLFYANDLLIFFRETKSNVEIIHKVFDSYGMILGQRVNLDKSEVLLSKSIPLR 117

Query: 172 VCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSMA 2
                         +FP VYLG   F+GAPK   L+   D I++KF  WKG +L MA
Sbjct: 118 RALALRFLTVMRLDSFPLVYLGVLNFQGAPKAKWLKATMDNILVKFDNWKGRTLFMA 174


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/73 (45%), Positives = 40/73 (54%)
 Frame = -2

Query: 220 NPRKSKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIIL 41
           NP KS V+ G+ + + +            G  P  YLG PIFKG PKV  LQPI DKII 
Sbjct: 3   NPNKSTVFAGSISVSKL-NQLINIIGFNHGTLPFTYLGVPIFKGKPKVIHLQPIVDKIIA 61

Query: 40  KFRRWKGTSLSMA 2
           K   WK + LS+A
Sbjct: 62  KLSTWKASLLSIA 74


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/111 (30%), Positives = 51/111 (45%)
 Frame = -2

Query: 334 SSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFNYVCXXXX 155
           S +++ADD +I C A+  +A++L  ILTLY + SGQ  N  K  + F +   +       
Sbjct: 364 SHLLFADDSLIPCRANRGDAQNLQNILTLYEEFSGQMLNKEKFAIMFSSNTGSEKRREVM 423

Query: 154 XXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSMA 2
                        YLG P+F G  K      + D+I  + + WK   LS A
Sbjct: 424 QTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKDRIWKRIQGWKEKMLSRA 474


>ref|XP_004512848.1| PREDICTED: uncharacterized protein LOC101501773 [Cicer arietinum]
          Length = 172

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
 Frame = -2

Query: 334 SSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGN------RAFNY 173
           S ++YA+D+ I    S A+  +LI     Y + S +  +  KSK+Y  +       AF+ 
Sbjct: 7   SRVLYANDVTIFYRVSDASLTALIMFFLDYDNASRKVTSNDKSKLYTRSIPPARASAFST 66

Query: 172 VCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSM 5
           +               P +YLG PIFKG P    L PI D+I  K   WKG  LS+
Sbjct: 67  LLGFHSGQ-------LPFIYLGVPIFKGKPHKVHLMPIGDRIKAKLLAWKGKILSI 115


>ref|NP_001173091.1| Os02g0636500 [Oryza sativa Japonica Group]
           gi|255671119|dbj|BAH91820.1| Os02g0636500 [Oryza sativa
           Japonica Group]
          Length = 625

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/130 (28%), Positives = 57/130 (43%)
 Frame = -2

Query: 394 EAVTWNQLQPFMAPKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNP 215
           E V   +L P    +R    S +++ADD ++   A+   AR +  IL  YA  +GQ  NP
Sbjct: 219 EKVAQGELSPVYVCRRAPCISHLLFADDTLLFFKANRLQARVIHGILGDYAAATGQLINP 278

Query: 214 RKSKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKF 35
            K  + FG+ +   +             AF   YLG P  +G       QP+ DK+  + 
Sbjct: 279 AKCSIMFGDVSPTEIKDDIRNILQIGSNAFEDRYLGFPTPEGRMNKGKFQPLHDKLWKRL 338

Query: 34  RRWKGTSLSM 5
            +W    LS+
Sbjct: 339 IQWGENYLSV 348


>gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japonica Group]
          Length = 946

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/130 (28%), Positives = 57/130 (43%)
 Frame = -2

Query: 394 EAVTWNQLQPFMAPKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNP 215
           E V   +L P    +R    S +++ADD ++   A+   AR +  IL  YA  +GQ  NP
Sbjct: 223 EKVAQGELSPVYVCRRAPCISHLLFADDTLLFFKANRLQARVIHGILGDYAAATGQLINP 282

Query: 214 RKSKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKF 35
            K  + FG+ +   +             AF   YLG P  +G       QP+ DK+  + 
Sbjct: 283 AKCSIMFGDVSPTEIKDDIRNILQIGSNAFEDRYLGFPTPEGRMNKGKFQPLHDKLWKRL 342

Query: 34  RRWKGTSLSM 5
            +W    LS+
Sbjct: 343 IQWGENYLSV 352


>gb|AAK09240.1|AC084320_27 putative reverse transcriptase [Oryza sativa Japonica Group]
            gi|108711395|gb|ABF99190.1| retrotransposon protein,
            putative, LINE subclass [Oryza sativa Japonica Group]
          Length = 1135

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/108 (31%), Positives = 52/108 (48%)
 Frame = -2

Query: 325  MYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFNYVCXXXXXXX 146
            MYADD VI    +  + ++L +IL  +   +G   N +KS+V    +  N          
Sbjct: 790  MYADDAVIFVNPTRGDVQALTEILQRFGTATGLVTNFQKSQVAV-IKCNNIDLDDVLEGV 848

Query: 145  XXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSMA 2
                  FP  YLG P+  G  + AD+Q IFDKI  +   W+G ++ +A
Sbjct: 849  PAVRACFPIKYLGLPLILGRMRKADMQHIFDKITGRITGWRGKNMGLA 896


>gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indica Group]
          Length = 725

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/130 (28%), Positives = 57/130 (43%)
 Frame = -2

Query: 394 EAVTWNQLQPFMAPKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNP 215
           E V   +L P    +R    S +++ADD ++   A+   AR +  IL  YA  +GQ  NP
Sbjct: 306 EKVAQGELSPVHVCRRAPGISHLLFADDTLLFFKANRLQARVIHGILGDYAAATGQLINP 365

Query: 214 RKSKVYFGNRAFNYVCXXXXXXXXXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKF 35
            K  + FG+ +   +             AF   YLG P  +G       QP+ DK+  + 
Sbjct: 366 AKCSIMFGDVSPTEIKDDIRNILQIGSNAFEDRYLGFPTPEGRMNKGKFQPLHDKLWKRL 425

Query: 34  RRWKGTSLSM 5
            +W    LS+
Sbjct: 426 IQWGENYLSV 435


>gb|AGC78964.1| OR143 (mitochondrion) [Vicia faba] gi|442803256|gb|AGC78991.1|
           OR143 (mitochondrion) [Vicia faba]
          Length = 143

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = -2

Query: 364 FMAPKRIVFPSSIMYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKS 206
           F++ + + FPS ++YADDI++ C AS +NA+ +++IL  YA+I GQ  NP K+
Sbjct: 36  FVSVRGLPFPSYLLYADDILLFCAASISNAKEILKILKDYAEILGQFHNPDKT 88


>emb|CAH67349.1| OSIGBa0130B08.9 [Oryza sativa Indica Group]
          Length = 482

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/108 (33%), Positives = 49/108 (45%)
 Frame = -2

Query: 325 MYADDIVIMCGASSANARSLIQILTLYADISGQAFNPRKSKVYFGNRAFNYVCXXXXXXX 146
           MYADD VI    +  +  +   IL  +   +G   N +KS+V    R  N          
Sbjct: 1   MYADDAVIFIDPNRDDVTAFADILHHFGAATGLVTNLQKSQVA-AIRCDNIDLTDVLQGV 59

Query: 145 XXXXGAFPTVYLGAPIFKGAPKVADLQPIFDKIILKFRRWKGTSLSMA 2
                +FP  YLG P+  G  +  DLQP+FDKI  K   W+G S+  A
Sbjct: 60  PAMMASFPLKYLGLPLVLGGLQKMDLQPVFDKISGKVASWRGKSMGAA 107