BLASTX nr result

ID: Rehmannia22_contig00038854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00038854
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006402169.1| hypothetical protein EUTSA_v10015409mg, part...    62   6e-08
ref|XP_006392773.1| hypothetical protein EUTSA_v10012229mg [Eutr...    57   3e-06

>ref|XP_006402169.1| hypothetical protein EUTSA_v10015409mg, partial [Eutrema
           salsugineum] gi|557103259|gb|ESQ43622.1| hypothetical
           protein EUTSA_v10015409mg, partial [Eutrema salsugineum]
          Length = 367

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
 Frame = +3

Query: 3   PATVSEAHQRTLLFERQQSCRTSTPFPANQTRPDRPGPFTDT----RPNNSSTTPGCTPP 170
           P TVSEAH+R + FE QQ   + T + +  +R    G  T      + +   TT   T  
Sbjct: 60  PDTVSEAHRRAVAFE-QQFKSSVTGWNSGFSRSRMTGTATSEGSHGQAHKKDTTEATTSN 118

Query: 171 PVPQSTSASSLPRQNSSRPGP--CFSCGEFGHRQSSCPKFMGTRTFFADA----NDEPDY 332
            +P + S +    + SS+P    CF+CGE GH Q++CPK    R  F D      D+   
Sbjct: 119 TLPVANSGTEPTLRRSSQPNALRCFACGEPGHLQTACPK-QTRRGLFGDETKWDKDDAAD 177

Query: 333 SGPPVFDSEQLPEQPEEFLYGDTGTSLI 416
                FDS    E PE+  +GDT  SL+
Sbjct: 178 DNEDEFDS----EVPEDHHHGDTSPSLM 201


>ref|XP_006392773.1| hypothetical protein EUTSA_v10012229mg [Eutrema salsugineum]
           gi|557089351|gb|ESQ30059.1| hypothetical protein
           EUTSA_v10012229mg [Eutrema salsugineum]
          Length = 382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   PATVSEAHQRTLLFERQQSCRTSTPFPANQTRPDRPGPFTDTRPNNSSTTPGCTPPPVPQ 182
           P+TV+EAH+R L FE Q    +S     N  RP   G  T+   ++S         P   
Sbjct: 59  PSTVAEAHRRALAFETQSKAGSSWTNSGNW-RPRLTGTDTENSSHDSPEVSKSQTAPRNS 117

Query: 183 STSASSLPRQNSSRPG-PCFSCGEFGHRQSSCP 278
           +T   S  R+++  P   C+SCGE GHRQ++CP
Sbjct: 118 TTLDESTLRRSTRPPALKCYSCGEPGHRQTACP 150


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