BLASTX nr result

ID: Rehmannia22_contig00038726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00038726
         (327 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    59   9e-07
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              57   3e-06
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   3e-06
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              56   6e-06
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              56   6e-06

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
 Frame = +3

Query: 3    DPICCLCGEFEENIDHIFFSCSRAKAAWKIAPSCWDFLPSE----PKSFGVWRQNICLGG 170
            + +C  CG  EE+I+H+ F C  ++  W ++P     +PS     P++   +  +  L  
Sbjct: 961  EKVCPRCGAEEESINHLLFLCPPSRQIWALSP-----IPSSEYIFPRNSLFYNFDFLLSR 1015

Query: 171  GNNVYI--DRIQLSVYILWGLWKCRNLWMFQKVRTSDKDLVDFAVAE 305
            G    I  D +++  +ILW +WK RN ++F+ V  S + ++DFA+ E
Sbjct: 1016 GKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQE 1062


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +3

Query: 12   CCLCGEFEENIDHIFFSCSRAKAAWKIAPSCWDFLPSEPKSFGVWRQNICLGGGNNVYID 191
            C +CGE +E +DH+F  C  A+A W  A     F  S       W +  C     + Y  
Sbjct: 1078 CPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYST 1137

Query: 192  RIQLSV-YILWGLWKCRNLWMFQKVRTSDKDLVDFAVAE 305
               L   YILW LWK RN  +F    T+  D+++ +  E
Sbjct: 1138 NWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFME 1176


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3    DPICCLCGEFEENIDHIFFSCSRAKAAWKIAPSCWDFLPSEPKSFGVWRQNICLGGGNNV 182
            D  C  CGE EE  +H+ + C  +  AW I+P        E  SF +W +++      + 
Sbjct: 1089 DGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLL-----DT 1143

Query: 183  YIDRIQLSVY--ILWGLWKCRNLWMFQKVRTSDKDLVDFAVAEWVEFK 320
            + D    +++  I W +W  RN W+F+K + + +++V+ AV   +EF+
Sbjct: 1144 HKDTEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFE 1191


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +3

Query: 12   CCLCGEFEENIDHIFFSCSRAKAAWKIAPSCWDFLPSEPKSFGVWRQNICLGGGNNVYID 191
            C +CGE +E +DH+F  C  A+A W  A     F  S       W +  C     + Y  
Sbjct: 1610 CPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGT 1669

Query: 192  RIQLSV-YILWGLWKCRNLWMFQKVRTSDKDLVDFAVAE 305
               L   YILW LWK RN  +F    T+  D+++ +  E
Sbjct: 1670 NWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFME 1708


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +3

Query: 12   CCLCGEFEENIDHIFFSCSRAKAAWKIAPSCWDFLPSEPKSFGVWRQNICLGGGNNVYID 191
            C +CGE +E +DH+F  C  A+A W  A     F  S       W +  C     + Y  
Sbjct: 1078 CPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGT 1137

Query: 192  RIQLSV-YILWGLWKCRNLWMFQKVRTSDKDLVDFAVAE 305
               L   YILW LWK RN  +F    T+  D+++ +  E
Sbjct: 1138 NWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFME 1176


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