BLASTX nr result

ID: Rehmannia22_contig00038559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00038559
         (559 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297979.1| AP2 domain-containing transcription factor f...    58   1e-06
ref|XP_002304554.1| hypothetical protein POPTR_0003s13910g [Popu...    58   1e-06

>ref|XP_002297979.1| AP2 domain-containing transcription factor family protein [Populus
           trichocarpa] gi|222845237|gb|EEE82784.1| AP2
           domain-containing transcription factor family protein
           [Populus trichocarpa]
          Length = 272

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/74 (47%), Positives = 42/74 (56%)
 Frame = -1

Query: 235 IQENSVAFTAENASHIGXXXXXXXXXXXXXXXXXXXXSYCQQPSNSVTNQAFEPLGSSVY 56
           +QEN+ +F   N + IG                     YCQ  S ++T+ AFEPLGSSVY
Sbjct: 1   MQENNFSFAFNNTTDIGSSLSQLILAGGTNTLDSIFS-YCQAAS-TLTSPAFEPLGSSVY 58

Query: 55  LRQRDLLQKFSNEN 14
           LRQRDLLQKFS EN
Sbjct: 59  LRQRDLLQKFSEEN 72


>ref|XP_002304554.1| hypothetical protein POPTR_0003s13910g [Populus trichocarpa]
           gi|222841986|gb|EEE79533.1| hypothetical protein
           POPTR_0003s13910g [Populus trichocarpa]
          Length = 311

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -1

Query: 112 QPSNSVTNQAFEPLGSSVYLRQRDLLQKFSNENSL 8
           QP+ S+T+ AFEPLGSSVYLRQRDLLQKFS EN +
Sbjct: 42  QPARSLTSPAFEPLGSSVYLRQRDLLQKFSEENRI 76


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