BLASTX nr result
ID: Rehmannia22_contig00037962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00037962
(568 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 207 2e-51
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 207 2e-51
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 204 2e-50
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 204 2e-50
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 203 3e-50
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 203 3e-50
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 171 2e-40
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 168 1e-39
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 162 4e-38
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle... 143 3e-32
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 143 3e-32
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle... 143 3e-32
gb|ABR67407.1| integrase [Cucumis melo subsp. melo] 142 6e-32
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle... 141 1e-31
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus] 141 1e-31
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus] 141 1e-31
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle... 141 1e-31
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle... 141 1e-31
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle... 140 2e-31
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle... 140 2e-31
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 207 bits (526), Expect = 2e-51
Identities = 108/185 (58%), Positives = 133/185 (71%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEV--QQEPTTPSTSQSI 175
KK +ISR++ FDEE +WD+ S EPT E +EPTTP TS +
Sbjct: 237 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKP--EPTREEPPSEEPTTPPTSPTS 294
Query: 176 AGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDA 355
+ + S ER R RS+++LYE TE +++TLFCL A CEP+ F+EA++ K WR+A
Sbjct: 295 SQIEESSS---ERT-PRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNA 350
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRAGI
Sbjct: 351 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGI 410
Query: 536 DYDEM 550
DYDE+
Sbjct: 411 DYDEI 415
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 207 bits (526), Expect = 2e-51
Identities = 108/185 (58%), Positives = 133/185 (71%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEV--QQEPTTPSTSQSI 175
KK +ISR++ FDEE +WD+ S EPT E +EPTTP TS +
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKP--EPTREEPPSEEPTTPPTSPTS 797
Query: 176 AGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDA 355
+ + S ER R RS+++LYE TE +++TLFCL A CEP+ F+EA++ K WR+A
Sbjct: 798 SQIEESSS---ERT-PRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNA 853
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRAGI
Sbjct: 854 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGI 913
Query: 536 DYDEM 550
DYDE+
Sbjct: 914 DYDEI 918
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 204 bits (518), Expect = 2e-50
Identities = 106/185 (57%), Positives = 132/185 (71%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEV--QQEPTTPSTSQSI 175
KK +ISR++ FDEE +WD+ S EPT E +EPTTP TS +
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTPPTSPTS 797
Query: 176 AGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDA 355
+ + S ER R RS+++LYE TE +++TLFCL A CEP+ F++A++ K WR+A
Sbjct: 798 SQIEESSS---ERT-PRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNA 853
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQR GI
Sbjct: 854 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGI 913
Query: 536 DYDEM 550
DYDE+
Sbjct: 914 DYDEV 918
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 204 bits (518), Expect = 2e-50
Identities = 106/185 (57%), Positives = 132/185 (71%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEV--QQEPTTPSTSQSI 175
KK +ISR++ FDEE +WD+ S EPT E +EPTTP TS +
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTPPTSPTS 797
Query: 176 AGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDA 355
+ + S ER R RS+++LYE TE +++TLFCL A CEP+ F++A++ K WR+A
Sbjct: 798 SQIEESSS---ERT-PRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNA 853
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQR GI
Sbjct: 854 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGI 913
Query: 536 DYDEM 550
DYDE+
Sbjct: 914 DYDEV 918
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 203 bits (516), Expect = 3e-50
Identities = 106/185 (57%), Positives = 131/185 (70%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEV--QQEPTTPSTSQSI 175
KK +ISR++ FDEE +WD+ S EPT E +EPTTP TS +
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTPPTSPTS 797
Query: 176 AGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDA 355
+ + S ER R RS+++LYE TE +++TLFCL A CEP+ F+EA++ K WR+A
Sbjct: 798 SQIEESSS---ERT-PRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNA 853
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MDEEI++I KNDTWELTSLP GHK IGVKWVYKAKKN+KGE+ERYKARLVAKGY QRAGI
Sbjct: 854 MDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGI 913
Query: 536 DYDEM 550
DYDE+
Sbjct: 914 DYDEV 918
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 203 bits (516), Expect = 3e-50
Identities = 107/185 (57%), Positives = 132/185 (71%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEV--QQEPTTPSTSQSI 175
KK +ISR++ FDEE +WD+ S EPT E +EPTT TS +
Sbjct: 679 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEP--EPTREEPPSEEPTTRPTSLTS 736
Query: 176 AGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDA 355
+ + S ER R RS+++LYE TE +++TLFCL A CEP+ F+EA++ K WR+A
Sbjct: 737 SQIEESSS---ERT-PRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNA 792
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRAGI
Sbjct: 793 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGI 852
Query: 536 DYDEM 550
DYDE+
Sbjct: 853 DYDEV 857
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 171 bits (432), Expect = 2e-40
Identities = 91/186 (48%), Positives = 123/186 (66%), Gaps = 4/186 (2%)
Frame = +2
Query: 5 KLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXS----TPIEPTIEVQQEPTTPSTSQS 172
K ++SRDVEF EE W++ + TP + T + P+T S S
Sbjct: 432 KTIVSRDVEFYEEGTWNWEEKEDTYDFFPYFEEIDEEALTPNDSTPALSPTPSTNEASSS 491
Query: 173 IAGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRD 352
G S ER R R++++LY+ TE I+D LFCL + +P+ F+EA+++KRWR
Sbjct: 492 SEGSSS------ERP-RRMRNIQELYDETEVIND--LFCLFVDSKPLNFDEAMKDKRWRQ 542
Query: 353 AMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAG 532
AM+EEI+AI KN+TWEL+SLPKGH+AIGVKWV+K KKNAKGE+ER+KARLVAKGY Q+
Sbjct: 543 AMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIKKNAKGEVERHKARLVAKGYKQQYE 602
Query: 533 IDYDEM 550
+DYDE+
Sbjct: 603 VDYDEV 608
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 168 bits (425), Expect = 1e-39
Identities = 92/185 (49%), Positives = 113/185 (61%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEV--QQEPTTPSTSQSI 175
KK +ISR++ FDEE +WD+ S EPT E +EPTTP TS +
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKP--EPTREEPPSEEPTTPPTSPT- 796
Query: 176 AGGDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDA 355
+ +I++ CEP+ F+EA++ K WR+A
Sbjct: 797 ---------------------------SSQIEE--------KCEPMDFQEAIEKKTWRNA 821
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MDEEI++I KNDTWELTSLP GHKAIGVKWVYKAKKN+KGE+ERYKARLVAKGYSQRAGI
Sbjct: 822 MDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGI 881
Query: 536 DYDEM 550
DYDE+
Sbjct: 882 DYDEV 886
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 162 bits (411), Expect = 4e-38
Identities = 86/183 (46%), Positives = 119/183 (65%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEVQQEPTTPSTSQSIAG 181
KK+ +SRDV+ +E S+WD+ + E IEV + T S++
Sbjct: 761 KKVTVSRDVQINEASEWDWNNSS----------------EVMIEVGESSPTSINSETTDD 804
Query: 182 GDSPPSFLNERDIERERSLEDLYENTERIDDITLFCLLANCEPVTFEEAVQNKRWRDAMD 361
D P + RSL DLY++T +++ L CLLA+ E ++FEEAV++K+W+ AMD
Sbjct: 805 EDEPRQ-------PKIRSLHDLYDST---NEVHLVCLLADAENISFEEAVRDKKWQTAMD 854
Query: 362 EEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGIDY 541
EEI+AI +N+TWELT LP+G + IGVKW++K K NA+GEIERYKARLVAKGY Q+ GIDY
Sbjct: 855 EEIKAIDRNNTWELTELPEGSQPIGVKWIFKKKMNAQGEIERYKARLVAKGYKQKEGIDY 914
Query: 542 DEM 550
DE+
Sbjct: 915 DEV 917
>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 143 bits (360), Expect = 3e-32
Identities = 65/78 (83%), Positives = 73/78 (93%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ K WR+AMDEEI+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 143 bits (360), Expect = 3e-32
Identities = 65/78 (83%), Positives = 73/78 (93%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ K WR+AMDEEI+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 143 bits (360), Expect = 3e-32
Identities = 65/78 (83%), Positives = 73/78 (93%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ K WR+AMDEEI+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
Length = 1281
Score = 142 bits (358), Expect = 6e-32
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Frame = +2
Query: 2 KKLVISRDVEFDEESDWDFGSQXXXXXXXXXXXXXSTPIEPTIEVQQEPTTPSTSQSIAG 181
+K++I+RDV F E+ W++ + +E + S+S S +
Sbjct: 700 RKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQELEQAKIQAVESSSSSTSS 759
Query: 182 GDSPPSFLNERDIERERSLEDLYENTERI--DDITLFCLLANCEPVTFEEAVQNKRWRDA 355
S +E R RS++++Y NT RI D F L A PVTF+EA+Q+++W+ A
Sbjct: 760 STSN----DEISPRRMRSIQEIYNNTNRINVDHFANFALFAGVGPVTFDEAIQDEKWKIA 815
Query: 356 MDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKARLVAKGYSQRAGI 535
MD+EI AI +N+TWEL LP +A+GVKWVY+ K + G +E YKARLV KGY Q G+
Sbjct: 816 MDQEIDAIRRNETWELMELPTNKQALGVKWVYRTKLKSDGNVEIYKARLVVKGYKQEYGV 875
Query: 536 DYDEM 550
DY+E+
Sbjct: 876 DYEEI 880
>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 141 bits (356), Expect = 1e-31
Identities = 64/78 (82%), Positives = 72/78 (92%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ K WR+AMDEEI+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIERKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLV KGYSQRAGIDYDE+
Sbjct: 62 RLVVKGYSQRAGIDYDEV 79
>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 141 bits (355), Expect = 1e-31
Identities = 65/78 (83%), Positives = 71/78 (91%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
FEEA + K WR AMDEEI++I KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 141 bits (355), Expect = 1e-31
Identities = 65/78 (83%), Positives = 71/78 (91%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
FEEA + K WR AMDEEI++I KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FEEAQEKKSWRSAMDEEIKSIQKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 141 bits (355), Expect = 1e-31
Identities = 64/78 (82%), Positives = 72/78 (92%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ K WR+AMDEEI+AI KNDTWEL SLP GH AIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHNAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 141 bits (355), Expect = 1e-31
Identities = 64/78 (82%), Positives = 72/78 (92%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ WR+AMDEEI+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIEKNTWRNAMDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 140 bits (354), Expect = 2e-31
Identities = 64/78 (82%), Positives = 72/78 (92%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ K WR+A DEEI+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIEKKTWRNATDEEIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79
>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 140 bits (354), Expect = 2e-31
Identities = 63/78 (80%), Positives = 73/78 (93%)
Frame = +2
Query: 317 FEEAVQNKRWRDAMDEEIQAIMKNDTWELTSLPKGHKAIGVKWVYKAKKNAKGEIERYKA 496
F+EA++ K WR++MDE+I+AI KNDTWEL SLP GHKAIGVKWVYKAKKN+KGE+ERYKA
Sbjct: 2 FQEAIEKKTWRNSMDEDIKAIKKNDTWELASLPNGHKAIGVKWVYKAKKNSKGEVERYKA 61
Query: 497 RLVAKGYSQRAGIDYDEM 550
RLVAKGYSQRAGIDYDE+
Sbjct: 62 RLVAKGYSQRAGIDYDEV 79