BLASTX nr result

ID: Rehmannia22_contig00037941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00037941
         (425 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like i...    88   1e-15
ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266...    86   5e-15
dbj|BAB70512.1| Myb [Nicotiana tabacum]                                82   6e-14
ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263...    75   7e-12
emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]    75   9e-12
gb|EXC34096.1| Myb-related protein 3R-1 [Morus notabilis]              62   1e-07
ref|XP_002509747.1| myb, putative [Ricinus communis] gi|22354964...    56   6e-06

>ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like isoform X1 [Solanum
           tuberosum] gi|565386118|ref|XP_006358884.1| PREDICTED:
           transcription factor MYB28-like isoform X2 [Solanum
           tuberosum]
          Length = 586

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 56/118 (47%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
 Frame = -2

Query: 424 KNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCAFDGKDANGSNLISEKGWLC 245
           +NSAMSY  TPSIIR+KT R A  +  SS   + TP+          + SNL        
Sbjct: 480 RNSAMSYTKTPSIIRKKTSRIAEASGHSSCTGSTTPMHFLESVPDREDSSNL-------- 531

Query: 244 SKDSTTG--TSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVMLTP 77
            KD  +G   SVSG++L RRLEY FD+EWDSS  R CTP S  P  GL   A  MLTP
Sbjct: 532 -KDRISGCKRSVSGKSLGRRLEYAFDMEWDSS--RSCTPVSAVPPCGLTLGANTMLTP 586


>ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266438 [Solanum
           lycopersicum]
          Length = 586

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 55/118 (46%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
 Frame = -2

Query: 424 KNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCAFDGKDANGSNLISEKGWLC 245
           +NSAMSY  TPSIIR+K  R A  +  SS   + TP+          + SNL        
Sbjct: 480 RNSAMSYTKTPSIIRKKNSRIAEASGHSSCTGSTTPMHFLGSVPDREDSSNL-------- 531

Query: 244 SKDSTTGT--SVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVMLTP 77
            KD  +G   SVSG++L RRLEY FD+EWDSS  R CTP S  P  GL   A  MLTP
Sbjct: 532 -KDRISGCKRSVSGKSLGRRLEYAFDVEWDSS--RSCTPVSAVPPCGLTLGANTMLTP 586


>dbj|BAB70512.1| Myb [Nicotiana tabacum]
          Length = 588

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 55/120 (45%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
 Frame = -2

Query: 424 KNSAMSYRNTPSIIRRKT--FREAGNASFSSSVSNPTPIRSCAFDGKDANGSNLISEKGW 251
           +NSAMSY  TPSIIR+K   F EA   S  +  ++PT I   A D +D   SNL      
Sbjct: 482 RNSAMSYTRTPSIIRKKNSRFPEAATHSRCTGTTSPTHIFPRASDREDT--SNL------ 533

Query: 250 LCSKDSTTG--TSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVMLTP 77
              KD  +G  +S SG++L RRLEY FD+EWD+S  RCCTP S      L+     MLTP
Sbjct: 534 ---KDRFSGCKSSASGKSLGRRLEYAFDMEWDAS--RCCTPVSAASPCALRLGGNTMLTP 588


>ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263258 [Vitis vinifera]
          Length = 606

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = -2

Query: 424 KNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCAFDGKDANGSNLI-SEKGWL 248
           ++SAMS+RNTPSIIR++T R++ N    S  S P     C  +G+D N S    + K  L
Sbjct: 492 RSSAMSFRNTPSIIRKRTSRKSSNNF--SDCSTPAQTVPCTQNGEDINSSKAFPNAKQGL 549

Query: 247 CSKDSTTGTSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVMLTP 77
            +        VS + L R LEY FD+EWD S  +C T  S+T +  + F A  +L P
Sbjct: 550 VASLCKPEAPVSVKTLGRCLEYAFDMEWDPSRVKCGTSVSSTATPDVNFSANRVLIP 606


>emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]
          Length = 579

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
 Frame = -2

Query: 424 KNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCAFDGKDANGSNLI--SEKGW 251
           ++SAMS+RNTPSIIR++T R++ N    S  S P     C  +G+D N S     +++G+
Sbjct: 465 RSSAMSFRNTPSIIRKRTSRKSSNNF--SDCSTPAQTVPCTQNGEDINSSKAFPNAKQGF 522

Query: 250 ---LCSKDSTTGTSVSGQALERRLEYEFDLEWDSSTARCCTPGSTTPSTGLKFDAKVMLT 80
              LC  ++     VS + L R LEY FD+EWD S  +C T  S+T +  + F A  +L 
Sbjct: 523 VSSLCKPEAP----VSVKTLGRCLEYAFDMEWDPSRVKCGTSVSSTATPDVNFSANRVLI 578

Query: 79  P 77
           P
Sbjct: 579 P 579


>gb|EXC34096.1| Myb-related protein 3R-1 [Morus notabilis]
          Length = 435

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = -2

Query: 424 KNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCAFDGKDANGSNLISEK-GWL 248
           + SAM+Y+NTPSIIR++T R A  + FS   S  T   +     KD N ++L + K GW+
Sbjct: 335 RKSAMTYKNTPSIIRKRTPRSAVRSCFSDVSSTLTRKTTSHTREKDVNSTDLPNSKHGWI 394

Query: 247 CSKDSTTGTSVSGQALERRLEYEFDLEWDS 158
              +S +G  ++ + LERRLEY F+ E DS
Sbjct: 395 --SNSISGPLIAVKPLERRLEYAFNEEKDS 422


>ref|XP_002509747.1| myb, putative [Ricinus communis] gi|223549646|gb|EEF51134.1| myb,
           putative [Ricinus communis]
          Length = 497

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/92 (31%), Positives = 57/92 (61%)
 Frame = -2

Query: 424 KNSAMSYRNTPSIIRRKTFREAGNASFSSSVSNPTPIRSCAFDGKDANGSNLISEKGWLC 245
           ++SA +++NTPSIIR++ +R+ G  + S  +  P+   SC+ + KD N +++        
Sbjct: 406 RSSARTFKNTPSIIRKRAYRKTGVDNPSDVICTPSLKFSCS-NSKDVNTADIPEANQGFL 464

Query: 244 SKDSTTGTSVSGQALERRLEYEFDLEWDSSTA 149
           S     G+S++ ++L R+L+Y FD E D++++
Sbjct: 465 SLFCKAGSSIAVKSLRRQLDYAFDSEKDAASS 496


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