BLASTX nr result

ID: Rehmannia22_contig00037811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00037811
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB93772.1| hypothetical protein L484_010911 [Morus notabilis]      62   1e-07
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    56   6e-06

>gb|EXB93772.1| hypothetical protein L484_010911 [Morus notabilis]
          Length = 124

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +2

Query: 83  FSSMTAPLPTF-PTLSLRLDRNNYIFWKSQILSNVRAHGFEDFLFGNTSPPDKFVDDDDS 259
           F S    +PT  P LS++LD +N++ WK+Q+L+ + AHGF+DF+ G+   P +F+ +   
Sbjct: 30  FPSSITTIPTVNPQLSIKLDDDNFLLWKNQMLNIIIAHGFDDFIDGSRPCPPRFLANQPG 89

Query: 260 QVINPNYTSHHQINS 304
           +V NP+YT+  ++ S
Sbjct: 90  EV-NPDYTAWQRLQS 103


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
 Frame = +2

Query: 86  SSMTAPLPTF-PTLSLRLDRNNYIFWKSQILSNVRAHGFEDFLFGNTSPPDKFVDDDD-- 256
           + + + LPTF  TL+++LDRNN++ W++Q+L+ V A+G+ED L G  S P +++   D  
Sbjct: 32  TGINSNLPTFGQTLTIKLDRNNFLIWRNQLLNIVVANGYEDILEGTRSCPYQWIAVTDTA 91

Query: 257 -----SQVINPNYTSHHQINSL 307
                S ++NP Y    + N L
Sbjct: 92  STTHGSVILNPEYVLWQRQNRL 113


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