BLASTX nr result
ID: Rehmannia22_contig00037696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00037696
(701 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 197 4e-48
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma... 170 4e-40
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 140 4e-31
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 140 4e-31
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 139 7e-31
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 139 7e-31
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 134 4e-29
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 134 4e-29
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 134 4e-29
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no... 133 5e-29
gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus pe... 130 3e-28
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 129 7e-28
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu... 125 1e-26
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 121 2e-25
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 121 2e-25
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 121 2e-25
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 112 1e-22
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 112 1e-22
gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus... 110 4e-22
gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus... 110 4e-22
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 197 bits (500), Expect = 4e-48
Identities = 96/164 (58%), Positives = 123/164 (75%), Gaps = 3/164 (1%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSH-FNTKTRKSLLTK 178
FD++Y GKGHE AK DVY LL +H R K + + S KS H NT+ KS L +
Sbjct: 1217 FDLIYKGKGHETAKNEDVYGLLISHDGRAKSNVKERSLSMKSSNPLHGINTQQHKSWLER 1276
Query: 179 MASQ--HFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGTGVL 352
+++ H S +GI+KISQ+LKR+LKEYPM+ +LSGEDKSTA+ ALQFHPRW +KIG+G+
Sbjct: 1277 LSANMNHLSVLGIKKISQKLKRILKEYPMDRQLSGEDKSTALTALQFHPRWPEKIGSGIQ 1336
Query: 353 DIKVGRHPDHNETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEK 484
+IKVG HP+H +TCF L R+DGTEEDFSY KCI+HALE++AP K
Sbjct: 1337 EIKVGLHPEHQQTCFILKRSDGTEEDFSYRKCINHALELVAPRK 1380
>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
Length = 1112
Score = 170 bits (431), Expect = 4e-40
Identities = 84/154 (54%), Positives = 110/154 (71%), Gaps = 4/154 (2%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMK---QFSEKSIVSSHFNTKTRKSLL 172
FDI+Y+GKGHEP+KPTDVY+LL++ V KP + +K QF+ + S + T RK L
Sbjct: 949 FDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPSEKIKLPVQFTSGNDQSQNLKTNGRKRFL 1008
Query: 173 TKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGTGVL 352
M S +E IR++S LKRML EY + +L GEDK+ A++ALQ+HPRWE+K G G +
Sbjct: 1009 AGMKSLRSAEDEIREVSLALKRMLHEYASDCQLRGEDKTLALRALQYHPRWEEKTGAGTV 1068
Query: 353 DIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCI 451
+IKVGRHPDH E+ CFF+V+TDGTEED SY K I
Sbjct: 1069 EIKVGRHPDHKESRCFFVVKTDGTEEDISYRKSI 1102
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 140 bits (353), Expect = 4e-31
Identities = 83/180 (46%), Positives = 113/180 (62%), Gaps = 14/180 (7%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKP--------DDPM--KQFSEKSIVSSHFNT 151
FDI+Y+GKG+EPA+P DVYTLL HV P D M K + + N
Sbjct: 1048 FDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNK 1107
Query: 152 KTRKS--LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
K+ KS +TK+ S S I+K+SQ LK+ML +Y ++ +L+ DK A+ ALQFHPR
Sbjct: 1108 KSCKSEWSITKLRS-FISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRR 1166
Query: 326 EDKIGTGV-LDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYR 499
+KIG G +IK+G H ++ ++ CF LVR+DG+ EDFSY KC+ HALE+IAP+KA R
Sbjct: 1167 NEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKTSR 1226
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 140 bits (353), Expect = 4e-31
Identities = 83/180 (46%), Positives = 113/180 (62%), Gaps = 14/180 (7%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKP--------DDPM--KQFSEKSIVSSHFNT 151
FDI+Y+GKG+EPA+P DVYTLL HV P D M K + + N
Sbjct: 1261 FDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNK 1320
Query: 152 KTRKS--LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
K+ KS +TK+ S S I+K+SQ LK+ML +Y ++ +L+ DK A+ ALQFHPR
Sbjct: 1321 KSCKSEWSITKLRS-FISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRR 1379
Query: 326 EDKIGTGV-LDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYR 499
+KIG G +IK+G H ++ ++ CF LVR+DG+ EDFSY KC+ HALE+IAP+KA R
Sbjct: 1380 NEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAPQKAKTSR 1439
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 139 bits (351), Expect = 7e-31
Identities = 83/183 (45%), Positives = 114/183 (62%), Gaps = 15/183 (8%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLL----STHVARTKPDDPMKQFSEKSIVSSHF-------N 148
FDI+Y+ KGHE A+P D+Y LL S H K P+ + + +
Sbjct: 1302 FDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSA 1361
Query: 149 TKTRKSL--LTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 319
+K KSL ++K + F + I+K+S+RLK +L++YP+N +LS DK+T + AL FHP
Sbjct: 1362 SKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHP 1421
Query: 320 RWEDKIGTGVLDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAY 496
R ++KIG G +IKV H HN CF LVRTDGTEEDFSY+KC+H ALEII P +A +Y
Sbjct: 1422 RRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSY 1481
Query: 497 RSR 505
+SR
Sbjct: 1482 QSR 1484
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 139 bits (351), Expect = 7e-31
Identities = 83/183 (45%), Positives = 114/183 (62%), Gaps = 15/183 (8%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLL----STHVARTKPDDPMKQFSEKSIVSSHF-------N 148
FDI+Y+ KGHE A+P D+Y LL S H K P+ + + +
Sbjct: 1160 FDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSA 1219
Query: 149 TKTRKSL--LTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 319
+K KSL ++K + F + I+K+S+RLK +L++YP+N +LS DK+T + AL FHP
Sbjct: 1220 SKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHP 1279
Query: 320 RWEDKIGTGVLDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAY 496
R ++KIG G +IKV H HN CF LVRTDGTEEDFSY+KC+H ALEII P +A +Y
Sbjct: 1280 RRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSY 1339
Query: 497 RSR 505
+SR
Sbjct: 1340 QSR 1342
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 134 bits (336), Expect = 4e-29
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 13/185 (7%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
FDI+Y+G+G +KP DVY LLST V+ +K ++ +K + ++S K +
Sbjct: 1257 FDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAFKGL 1315
Query: 182 ASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
+ F + + ++S LK++L +Y + +LS +DK+T I+AL FHPR
Sbjct: 1316 GNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRR 1375
Query: 326 EDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRS 502
+K+G DI+V HP+H N CF LVR DG+ EDFSY+KC+ ALEIIAPEKA YR+
Sbjct: 1376 NEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRA 1435
Query: 503 RKQNL 517
+ + L
Sbjct: 1436 KWKRL 1440
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 134 bits (336), Expect = 4e-29
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 13/185 (7%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
FDI+Y+G+G +KP DVY LLST V+ +K ++ +K + ++S K +
Sbjct: 1295 FDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAFKGL 1353
Query: 182 ASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
+ F + + ++S LK++L +Y + +LS +DK+T I+AL FHPR
Sbjct: 1354 GNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRR 1413
Query: 326 EDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRS 502
+K+G DI+V HP+H N CF LVR DG+ EDFSY+KC+ ALEIIAPEKA YR+
Sbjct: 1414 NEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRA 1473
Query: 503 RKQNL 517
+ + L
Sbjct: 1474 KWKRL 1478
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 134 bits (336), Expect = 4e-29
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 13/185 (7%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
FDI+Y+G+G +KP DVY LLST V+ +K ++ +K + ++S K +
Sbjct: 1257 FDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAFKGL 1315
Query: 182 ASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
+ F + + ++S LK++L +Y + +LS +DK+T I+AL FHPR
Sbjct: 1316 GNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRR 1375
Query: 326 EDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRS 502
+K+G DI+V HP+H N CF LVR DG+ EDFSY+KC+ ALEIIAPEKA YR+
Sbjct: 1376 NEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRA 1435
Query: 503 RKQNL 517
+ + L
Sbjct: 1436 KWKRL 1440
>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
Length = 1410
Score = 133 bits (335), Expect = 5e-29
Identities = 79/183 (43%), Positives = 108/183 (59%), Gaps = 16/183 (8%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLL-TK 178
F++V++GKGHE KP +VY +L+T ++ PD ++ +E +H + K LL K
Sbjct: 1213 FELVFSGKGHEVDKPINVYDMLATGIS---PD--VQGVNETPDAKNHRSVKFGALLLYDK 1267
Query: 179 MASQHFSEVGIRK--------------ISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFH 316
SQ ++GI K +S L ++L +YP+N L +DKST + AL FH
Sbjct: 1268 SVSQGLKKLGISKDRIKKLFKLDDIWILSNALAKILNKYPINQSLDHKDKSTLMIALYFH 1327
Query: 317 PRWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASA 493
PR ++KIGTG DIKV HP H + CF LVR DGT EDFSY KC+ ALEII P+ A
Sbjct: 1328 PRIDEKIGTGFQDIKVAYHPKHQSSRCFVLVRADGTVEDFSYRKCVLGALEIIDPQAAEI 1387
Query: 494 YRS 502
Y+S
Sbjct: 1388 YKS 1390
>gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 130 bits (328), Expect = 3e-28
Identities = 74/177 (41%), Positives = 113/177 (63%), Gaps = 6/177 (3%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPD--DPMKQFS---EKSIVSSHFNTKTRKS 166
FDI+Y+ +G +KP + Y LL + ++ ++ + + K ++ +K V+S + +S
Sbjct: 1177 FDILYSKEGLNLSKPLNPYDLLGSQISSSRENAFETSKAWNNTLDKCDVTS-IGLEKSES 1235
Query: 167 LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGTG 346
+ + ++ + I+K +Q LKR+L++Y +N L+ DKS AL FHP DK+G+G
Sbjct: 1236 VFKSVIRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKMGSG 1295
Query: 347 VLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRSRKQN 514
V DIKVG+HP H N CF LVR D TEEDFSY+KC+ ALEI+APE+A +YRS+ N
Sbjct: 1296 VQDIKVGQHPKHENARCFMLVRIDRTEEDFSYHKCVLGALEIVAPERAKSYRSKWMN 1352
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 129 bits (325), Expect = 7e-28
Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 19/187 (10%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTK--------- 154
FDI+Y+GKGHE KP DVY LL K + ++ +K+ +S ++ +
Sbjct: 1281 FDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESL-DKNTISEKYSAQLMLKNGGST 1339
Query: 155 ---------TRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKAL 307
KS+L K + + I+K+S L+ +L +Y +N +L+ DKST + AL
Sbjct: 1340 IKGLKRLDSVSKSILRKFLTLN----DIQKLSFALRTILHKYSLNERLNEVDKSTLMMAL 1395
Query: 308 QFHPRWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEK 484
FHP ++KIG G DIKVG H + T CF L+R+DGT EDFSY+KC+ ALEIIAP +
Sbjct: 1396 YFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHR 1455
Query: 485 ASAYRSR 505
Y+S+
Sbjct: 1456 VKGYQSK 1462
>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao]
Length = 1484
Score = 125 bits (315), Expect = 1e-26
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 15/183 (8%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNT---------- 151
FDI+Y+ K A+P DVY LL + ++ K D + + S + +
Sbjct: 1295 FDIIYSVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSA 1354
Query: 152 -KTRKSLLTKMAS---QHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 319
+ K + TK S + + I+++S+ L+ +L +YP++ +LS D +T + AL FHP
Sbjct: 1355 SEELKKIETKRRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHP 1414
Query: 320 RWEDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAY 496
R ++KIG+G +IKVG HP+H N CF LVRTDGT DFSY+KC+ ALEIIAP +A +Y
Sbjct: 1415 RRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKSY 1474
Query: 497 RSR 505
+S+
Sbjct: 1475 KSK 1477
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 121 bits (303), Expect = 2e-25
Identities = 71/178 (39%), Positives = 106/178 (59%), Gaps = 10/178 (5%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQ------FSEKSIVSSHF-NTKTR 160
FDI+++ KG +KP VY LLS+ + T P + + S+K + + + N R
Sbjct: 1256 FDIIFS-KGPVSSKPIKVYDLLSSQII-TNPQNGFEMSDAPIHLSDKFVAPNMYKNGYLR 1313
Query: 161 K--SLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDK 334
K S+ + ++ + I ++SQ LK +L++Y +N +++ DK + L+FHP + K
Sbjct: 1314 KWESITKSVLRENLTIQDIDRLSQALKNILQKYDVNERINDMDKQVLMMVLRFHPHGDRK 1373
Query: 335 IGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRSR 505
IG G+ ++KVG HPDH N CF LVRTDGT ED SY+KCI A +IIAP +A YR R
Sbjct: 1374 IGLGIKEVKVGHHPDHENVRCFMLVRTDGTIEDVSYHKCICGAYDIIAPHRAKGYRVR 1431
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 121 bits (303), Expect = 2e-25
Identities = 78/180 (43%), Positives = 108/180 (60%), Gaps = 14/180 (7%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSE-----KSIVS-----SHFNT 151
FDI+Y+GKG+E A+ +VYTLL V P+ + + S+V +
Sbjct: 1261 FDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDK 1320
Query: 152 KTRKSLL--TKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
K+ KS L TK+ S +FS I+K+SQ LK+ML +Y + +L+ DK A+ ALQFHPR
Sbjct: 1321 KSCKSELSFTKLRS-YFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRR 1379
Query: 326 EDKIGTGV-LDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYR 499
+KIG G +IK+G H + CF +VR+D T EDFSY KC+ HALE+IAP+KA R
Sbjct: 1380 NEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKTSR 1439
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 121 bits (303), Expect = 2e-25
Identities = 78/180 (43%), Positives = 108/180 (60%), Gaps = 14/180 (7%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSE-----KSIVS-----SHFNT 151
FDI+Y+GKG+E A+ +VYTLL V P+ + + S+V +
Sbjct: 953 FDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDK 1012
Query: 152 KTRKSLL--TKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
K+ KS L TK+ S +FS I+K+SQ LK+ML +Y + +L+ DK A+ ALQFHPR
Sbjct: 1013 KSCKSELSFTKLRS-YFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRR 1071
Query: 326 EDKIGTGV-LDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYR 499
+KIG G +IK+G H + CF +VR+D T EDFSY KC+ HALE+IAP+KA R
Sbjct: 1072 NEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAKTSR 1131
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 112 bits (279), Expect = 1e-22
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
FD++Y+ K E AK DVY LL T + + Q + S + + +K
Sbjct: 1282 FDVMYSEKVQELAKSVDVYDLLETSFDQLDQEINTSQSNNYSSDKCNSQFRHKKGRYAPK 1341
Query: 182 ASQHFSEV--------GIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKI 337
+ + V I+K++ + +L +YP++ LS DK T +K L FHPR +K+
Sbjct: 1342 EPKQWKSVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKL 1401
Query: 338 GTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRSR 505
G+G IKVG HP ++ CFF++RTDGT EDFSY KCI AL+++ PEK+ + +
Sbjct: 1402 GSGPQHIKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEKSKIQKKK 1458
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 112 bits (279), Expect = 1e-22
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
FD++Y+ K E AK DVY LL T + + Q + S + + +K
Sbjct: 1283 FDVMYSEKVQELAKSVDVYDLLETSFDQLDQEINTSQSNNYSSDKCNSQFRHKKGRYAPK 1342
Query: 182 ASQHFSEV--------GIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKI 337
+ + V I+K++ + +L +YP++ LS DK T +K L FHPR +K+
Sbjct: 1343 EPKQWKSVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKL 1402
Query: 338 GTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRSR 505
G+G IKVG HP ++ CFF++RTDGT EDFSY KCI AL+++ PEK+ + +
Sbjct: 1403 GSGPQHIKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEKSKIQKKK 1459
>gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 110 bits (275), Expect = 4e-22
Identities = 74/199 (37%), Positives = 109/199 (54%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSI---VSSHFNTKT----R 160
FDI+Y+ KGHE K DVY LL KP++ + + + S F K +
Sbjct: 1273 FDIIYSEKGHEVDKAVDVYKLLEASF--DKPNNKIGFHAHNNSSGKCGSEFRHKNGYAFK 1330
Query: 161 KSLLTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKI 337
+ K ++F V I+K++ + +L +Y ++ LS D+ST ++ L FHPR +K+
Sbjct: 1331 EGKQWKNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKL 1390
Query: 338 GTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRSRKQN 514
G G DIKVG HP ++ CF +VRTDGT EDFSY KCI ALE++ P K S + +K +
Sbjct: 1391 GIGPQDIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDP-KMSKIQKKKWS 1449
Query: 515 LAQVPTVQLG*FCMSKKIQ 571
VQ C++K I+
Sbjct: 1450 ARDDAQVQ----CVTKDIE 1464
>gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 110 bits (275), Expect = 4e-22
Identities = 74/199 (37%), Positives = 109/199 (54%), Gaps = 9/199 (4%)
Frame = +2
Query: 2 FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSI---VSSHFNTKT----R 160
FDI+Y+ KGHE K DVY LL KP++ + + + S F K +
Sbjct: 1272 FDIIYSEKGHEVDKAVDVYKLLEASF--DKPNNKIGFHAHNNSSGKCGSEFRHKNGYAFK 1329
Query: 161 KSLLTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKI 337
+ K ++F V I+K++ + +L +Y ++ LS D+ST ++ L FHPR +K+
Sbjct: 1330 EGKQWKNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKL 1389
Query: 338 GTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAPEKASAYRSRKQN 514
G G DIKVG HP ++ CF +VRTDGT EDFSY KCI ALE++ P K S + +K +
Sbjct: 1390 GIGPQDIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDP-KMSKIQKKKWS 1448
Query: 515 LAQVPTVQLG*FCMSKKIQ 571
VQ C++K I+
Sbjct: 1449 ARDDAQVQ----CVTKDIE 1463