BLASTX nr result

ID: Rehmannia22_contig00037388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00037388
         (349 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]      58   1e-06
ref|XP_002309173.2| pentatricopeptide repeat-containing family p...    58   1e-06
ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citr...    56   4e-06
ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]    55   7e-06

>ref|XP_004246310.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Solanum lycopersicum]
          Length = 496

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
 Frame = +2

Query: 167 LHNYYIRKRRKWPIQPYKTQW-DQIFAFRLAKQNFKQSI--RKTKTQLLSDLINSFSAYE 337
           ++NY++RKRRKWP+  YKT+W ++    +L+ Q   +S   R  KT LLS L++SFSAYE
Sbjct: 27  MNNYFLRKRRKWPLSLYKTKWQEEKLTHQLSMQKLVESTPNRSPKTHLLSILLDSFSAYE 86

Query: 338 GNPT 349
            +PT
Sbjct: 87  CDPT 90


>gb|EXB42398.1| hypothetical protein L484_021993 [Morus notabilis]
          Length = 494

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +2

Query: 167 LHNYYIRKRRKWPIQPYKTQWDQIFAFRLAKQNFKQSIRKTKTQLLSDLINSFSAYEGNP 346
           L N ++RK R++PI PYKT+W + F    A Q  K+   +   +LLS L+NSF++Y+ NP
Sbjct: 8   LTNKFLRKHREFPISPYKTKWHETFNQTQALQTLKRHQNENPNRLLSLLLNSFNSYDCNP 67

Query: 347 T 349
           T
Sbjct: 68  T 68


>ref|XP_002309173.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335936|gb|EEE92696.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 490

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
 Frame = +2

Query: 173 NYYIRKRRKWPIQPYKTQWDQIFAFRLAKQNFKQSIRK-------TKTQLLSDLINSFSA 331
           ++++RK RKWP  PYK +W +IF  + A Q+ KQS  K        K  LLS LI+SFS 
Sbjct: 11  SFFLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPPQQESPNKPHLLSSLIHSFSI 70

Query: 332 YEGNP 346
           Y+  P
Sbjct: 71  YDVEP 75


>ref|XP_006429524.1| hypothetical protein CICLE_v10013613mg [Citrus clementina]
           gi|557531581|gb|ESR42764.1| hypothetical protein
           CICLE_v10013613mg [Citrus clementina]
          Length = 506

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
 Frame = +2

Query: 173 NYYIRKRRKWPIQPYKTQWDQIFAFRLAKQNFKQSIRKTKTQ----------LLSDLINS 322
           N ++RK RKWP+ PYK +W Q    + AKQN KQS+    T+          +LS L++S
Sbjct: 11  NLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHS 70

Query: 323 FSAYEGNP 346
           FS Y   P
Sbjct: 71  FSIYNCEP 78


>ref|XP_004305097.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 491

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +2

Query: 176 YYIRKRRKWPIQPYKTQWDQIFAFRLAKQNFKQSIRKTKTQLLSDLINSFSAYEGNPT 349
           +++RK RKWP+ PY T+W ++F    A Q  K S       LLS LI+SF+ +  +PT
Sbjct: 13  FFVRKHRKWPVSPYNTKWHKLFNQHQALQTLKHSPLNPPQTLLSTLIHSFNTFNCDPT 70


>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Vitis vinifera]
          Length = 505

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
 Frame = +2

Query: 179 YIRKRRKWPIQPYKTQWDQIFAFRLAKQNFKQSIRK--------TKTQLLSDLINSFSAY 334
           ++RKRRKWP+ PYK  W + F  R A Q  K +I          + +Q LS LI+SF  Y
Sbjct: 12  FLRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRIY 71

Query: 335 EGNPT 349
             +PT
Sbjct: 72  NSDPT 76


>emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]
          Length = 390

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
 Frame = +2

Query: 179 YIRKRRKWPIQPYKTQWDQIFAFRLAKQNFKQSIRK--------TKTQLLSDLINSFSAY 334
           ++RKRRKWP+ PYK  W + F  R A Q  K +I          + +Q LS LI+SF  Y
Sbjct: 14  FLRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRIY 73

Query: 335 EGNPT 349
             +PT
Sbjct: 74  NSDPT 78