BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00036931
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]...    92   5e-17
ref|NP_904157.1| hypothetical protein AmtrCp086 [Amborella trich...    62   6e-08
gb|ACU18876.1| unknown [Glycine max]                                   56   4e-06
gb|AFM77025.1| Ycf1, partial (chloroplast) [Alocasia sp. ASPNZ01]      55   1e-05
gb|AFM77024.1| Ycf1, partial (chloroplast) [Leucocasia gigantea]       55   1e-05

>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
           gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
           [Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
           protein (chloroplast) [Tectona grandis]
           gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
           [Tectona grandis]
          Length = 1898

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 48/58 (82%), Positives = 51/58 (87%), Gaps = 3/58 (5%)
 Frame = -2

Query: 359 MSFLVSPFLFLFYTWKVQKTSYNNPDIAIEK---K*GRFVMIFQSFLLGNLVSLCVKI 195
           MSFLV  FLFLFY WKVQK+SYNNP+IAIEK   K GRFVMIFQSFLLGNLVSLC+KI
Sbjct: 1   MSFLVYLFLFLFYIWKVQKSSYNNPEIAIEKKKEKKGRFVMIFQSFLLGNLVSLCMKI 58


>ref|NP_904157.1| hypothetical protein AmtrCp086 [Amborella trichopoda]
           gi|34481687|emb|CAD45164.1| ycf1 [Amborella trichopoda]
          Length = 1829

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/55 (60%), Positives = 40/55 (72%)
 Frame = -2

Query: 359 MSFLVSPFLFLFYTWKVQKTSYNNPDIAIEKK*GRFVMIFQSFLLGNLVSLCVKI 195
           MSFL       FY WKV+K+SYNN + A EKK   F+MI +SFLLGNL+SLC+KI
Sbjct: 1   MSFL--DISISFYIWKVKKSSYNNRESATEKKERGFLMILKSFLLGNLLSLCMKI 53


>gb|ACU18876.1| unknown [Glycine max]
          Length = 299

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 8/49 (16%)
 Frame = -2

Query: 317 WKVQKTSYNNPDIAIEKK*G--------RFVMIFQSFLLGNLVSLCVKI 195
           WKV+K+ YNNP IAIEK+          RF MIFQSF+L NLVSLC+KI
Sbjct: 7   WKVEKSLYNNPKIAIEKESRNCNRKEKERFEMIFQSFILDNLVSLCMKI 55


>gb|AFM77025.1| Ycf1, partial (chloroplast) [Alocasia sp. ASPNZ01]
          Length = 70

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = -2

Query: 314 KVQKTSYNNPDIAIEKK*GRFVMIFQSFLLGNLVSLCVKI 195
           KV+K+SYNN +IAI+KK  RFVMI + FLLGN +SLC+KI
Sbjct: 2   KVKKSSYNNREIAIQKKRRRFVMILKYFLLGNPLSLCMKI 41


>gb|AFM77024.1| Ycf1, partial (chloroplast) [Leucocasia gigantea]
          Length = 70

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = -2

Query: 314 KVQKTSYNNPDIAIEKK*GRFVMIFQSFLLGNLVSLCVKI 195
           KV+K+SYNN +IAI+KK  RFVMI + FLLGN +SLC+KI
Sbjct: 2   KVKKSSYNNREIAIQKKRRRFVMILKFFLLGNPLSLCMKI 41