BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00036910
         (761 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposo...   255   1e-65
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]   243   4e-62
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       226   6e-57
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   172   1e-40
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   168   2e-39
gb|AAD12994.1| gag-pol polyprotein [Zea mays]                         132   1e-28
gb|EXC14254.1| hypothetical protein L484_021752 [Morus notabilis]     131   3e-28
gb|ABA97777.1| transposon protein, putative, unclassified [Oryza...   130   4e-28
emb|CAE04255.4| OSJNBa0089N06.16 [Oryza sativa Japonica Group]        130   4e-28
emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]        130   4e-28
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]        130   4e-28
gb|ABF96044.1| transposon protein, putative, unclassified [Oryza...   130   4e-28
gb|AAD12997.1| gag-pol polyprotein [Zea mays]                         130   5e-28
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   130   6e-28
gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group]     129   8e-28
emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]   128   2e-27
gb|ABF94883.1| transposon protein, putative, unclassified [Oryza...   128   2e-27
gb|EEE61551.1| hypothetical protein OsJ_15889 [Oryza sativa Japo...   127   3e-27
emb|CAE03274.1| OSJNBa0011J08.29 [Oryza sativa Japonica Group] g...   127   3e-27
emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]   127   5e-27

>gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 443

 Score =  255 bits (651), Expect = 1e-65
 Identities = 132/235 (56%), Positives = 169/235 (71%), Gaps = 12/235 (5%)
 Frame = -3

Query: 669 KGEKQCSSKPKKN----------CFHCGEEGH*KRYCPKFLSKVKENKKR-KYDLLVLES 523
           KGEK  + KPKK           CFHC  EGH KR C K+L ++K+ K++ K DL VLE 
Sbjct: 136 KGEKGKNRKPKKTKGPIQKPKGKCFHCNGEGHWKRNCHKYLEELKKKKEQGKSDLPVLEI 195

Query: 522 CLVAKDSSTWVVDSGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNI 343
           CLV  D+STW++DSGATNHVC SLQ LSSY ELADG + ++VGNGA V+AKAVG ++L+ 
Sbjct: 196 CLVEGDTSTWIIDSGATNHVCFSLQSLSSYTELADGDYMIKVGNGARVTAKAVGEVRLHF 255

Query: 342 RD-KILILNDVYYIPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLY 166
           R+ K L+LN+VY+IP  RRNLIS+SKL E  F + F ++ + IS+NG +I + +L++ LY
Sbjct: 256 RENKFLVLNNVYFIPDIRRNLISMSKLFEQFFKVYFVNDFVHISRNGLNIYSGRLDDGLY 315

Query: 165 LIKPNEQPLLNAEMFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDG 1
            IKP    LLN EMFRV  PK K+QK+S ++ TYLWHL LGHI+L RI RL KDG
Sbjct: 316 CIKPIPNSLLNTEMFRVAEPKNKKQKISHENNTYLWHLGLGHINLNRIERLVKDG 370


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score =  243 bits (621), Expect = 4e-62
 Identities = 120/226 (53%), Positives = 167/226 (73%), Gaps = 3/226 (1%)
 Frame = -3

Query: 669 KGEKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKR-KYDLLVLESCLVAKDSSTW 493
           K  K    KPK+ CF+C ++ H KR C K+L ++K+ KK+ K DLLV+E+CLV  D S+ 
Sbjct: 161 KKRKVVELKPKEKCFYCNQDDHWKRNCKKYLDELKQKKKQGKLDLLVMETCLVENDFSSL 220

Query: 492 VVDSGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNI-RDKILILND 316
           ++DSGA+NHVC SL+ML S ++L +G+F MRVG+GA VSA  VG + L+   +K L+L++
Sbjct: 221 IIDSGASNHVCISLKMLESSKDLEEGAFMMRVGSGARVSATTVGTVXLSFANNKYLLLHN 280

Query: 315 VYYIPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLL 136
           VY+IP F+RNLISVSKLHE    +SF+ +S+ I KNG +IC+  ++N +Y +KP    LL
Sbjct: 281 VYFIPDFKRNLISVSKLHEQFIXVSFDIDSVSIYKNGMNICSGYVDNGIYFVKPIFNNLL 340

Query: 135 NAEMFRVEHPKPKRQKVSQD-DETYLWHLRLGHISLERINRLAKDG 1
             EMF+V  P PKR+K+S D ++TYLWHLRLGHI+++RI RLAKDG
Sbjct: 341 QTEMFKVAEPTPKRRKISNDKNDTYLWHLRLGHINIDRIERLAKDG 386


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  226 bits (576), Expect = 6e-57
 Identities = 117/231 (50%), Positives = 159/231 (68%), Gaps = 8/231 (3%)
 Frame = -3

Query: 669 KGEKQCSSKPKKN-----CFHCGEEGH*KRYCPKFLSKVKENK--KRKYDLLVLESCLVA 511
           KG+   +SK KKN     CFHC ++GH KR CPK+L++ K  K  + KYDLLV+E+CLV 
Sbjct: 236 KGKAPNTSKVKKNADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVE 295

Query: 510 KDSSTWVVDSGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDKI 331
            D+STW++DSGATNH+C S Q  SS+++L +G  T++VG G VVSA+AVG + L  +D+ 
Sbjct: 296 CDASTWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRY 355

Query: 330 LILNDVYYIPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPN 151
           LIL DV Y+P  +RNLIS++ + EH++++SF  N + I   G  IC+A  EN LY ++P 
Sbjct: 356 LILKDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPT 415

Query: 150 E-QPLLNAEMFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDG 1
               +LN EMFR    + K+QKVS +   YLWHLRLGHI+L RI RL K G
Sbjct: 416 RANVVLNTEMFRTLETQNKKQKVSSN--AYLWHLRLGHINLNRIERLVKSG 464


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  172 bits (436), Expect = 1e-40
 Identities = 97/221 (43%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
 Frame = -3

Query: 645 KPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVDSGATNH 466
           KPK  CFHC + GH K  CP +L+K K+     + LLV+E+CL    +  W VDSGATNH
Sbjct: 212 KPKGKCFHCKQPGHWKLQCPTWLAKKKQGTS-PFHLLVVETCLAVLTTHQWCVDSGATNH 270

Query: 465 VCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIR-DKILILNDVYYIPGFRR 289
           VC+SLQ      +L+ G   + +G+G  V+  AVG I LN + ++IL L +V Y+P  RR
Sbjct: 271 VCNSLQGFQETRQLSKGEVNIFLGDGTEVAVLAVGNIALNFKNNRILSLKNVLYVPSIRR 330

Query: 288 NLISVSKLHEHLFSLSFN---DNSIIISKNGRDICTAKLENRLYLIKPN-EQPLLNAEMF 121
           NLISVS L ++ +S+ FN   D+S++I    + IC+  L + LY++K   E  L N+E+ 
Sbjct: 331 NLISVSSLSKNGYSVCFNEFYDDSVVIKFREQIICSGSLIDGLYILKVTPELQLTNSEVN 390

Query: 120 RVEHPKPKRQKVSQD-DETYLWHLRLGHISLERINRLAKDG 1
             +   P ++K   +   TYLWHLRLGHI+L+RI+ L KDG
Sbjct: 391 NFDIVAPLKRKCPIELSYTYLWHLRLGHINLDRISLLVKDG 431


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  168 bits (426), Expect = 2e-39
 Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 6/221 (2%)
 Frame = -3

Query: 645  KPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVDSGATNH 466
            KPK  CFHC +  H K  CP +L+K K+     + LLV+E+CL    +  W VD GATNH
Sbjct: 564  KPKGKCFHCKQPSHWKLQCPTWLAKKKQGTS-PFHLLVVETCLAVLTTHQWCVDLGATNH 622

Query: 465  VCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIR-DKILILNDVYYIPGFRR 289
            VC+SLQ      +L+ G   + +GNG+ V+  AVG I LN + ++ L L +V Y+P  RR
Sbjct: 623  VCNSLQGFQETRQLSKGEVNIFLGNGSEVAVLAVGNIALNFKNNRTLFLKNVLYVPSIRR 682

Query: 288  NLISVSKLHEHLFSLSFN---DNSIIISKNGRDICTAKLENRLYLIKPN-EQPLLNAEMF 121
            NLI +S L ++ +S+ FN   D+S++I    + IC+  L + LY++K   E  L N+E+ 
Sbjct: 683  NLIPISSLSKNGYSVCFNEFYDDSVVIKFREQMICSGSLIDSLYILKVTPELQLTNSEVN 742

Query: 120  RVEHPKP-KRQKVSQDDETYLWHLRLGHISLERINRLAKDG 1
              +   P KR++  +   TYLWHLRLGHI+L+RI+ L KDG
Sbjct: 743  NFDIVAPLKRKRPIELSYTYLWHLRLGHINLDRISLLVKDG 783


>gb|AAD12994.1| gag-pol polyprotein [Zea mays]
          Length = 595

 Score =  132 bits (333), Expect = 1e-28
 Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 4/219 (1%)
 Frame = -3

Query: 648 SKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVDSGATN 469
           S P   C +C + GH KR CP+FL  + E+ K +    V ES  +   S +W +DSGAT 
Sbjct: 251 SVPPDTCLYCKKTGHYKRKCPEFLQYLLESGKDQVTF-VNESLYLEYPSYSWWIDSGATV 309

Query: 468 HVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLN-IRDKILILNDVYYIPGFR 292
           HV +SLQ L + + L  G  T+RV NG   + +A+G I L  +   +L+L DV Y+P  R
Sbjct: 310 HVANSLQGLRTSQRLPKGRRTIRVANGVEAAVEAIGDIHLKLVNGFVLLLRDVLYVPSLR 369

Query: 291 RNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAEMFRVE 112
           RNLISVS+L +      F D   +I  + +D+  A   + LYL+  ++  ++N       
Sbjct: 370 RNLISVSRLDDQHIHCHFGDRQCVIQFDNKDVGLAIRRDMLYLL--SQSDVVNVLDIPEN 427

Query: 111 HPKP---KRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
            P     KR++   +  + LWH RLGHIS  RI  L K+
Sbjct: 428 DPASSGRKRKRSDGETSSKLWHYRLGHISRGRIESLVKE 466


>gb|EXC14254.1| hypothetical protein L484_021752 [Morus notabilis]
          Length = 398

 Score =  131 bits (329), Expect = 3e-28
 Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
 Frame = -3

Query: 669 KGEKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKR-KYDLLVLESCLVAKDSSTW 493
           K  K    KPK  CFHC  EGH KR C K+L ++K+ K++ K DLLVLE+CLV  D+S W
Sbjct: 248 KKAKSPIQKPKGKCFHCNGEGHWKRNCHKYLEELKKKKEQGKSDLLVLETCLVEGDTSAW 307

Query: 492 VVDSGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVI 355
           ++DSGATNHV  SLQ LSSY ELADG +TM+VGNGA VSAKAVG +
Sbjct: 308 IIDSGATNHVYFSLQSLSSYTELADGDYTMKVGNGARVSAKAVGEV 353


>gb|ABA97777.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1378

 Score =  130 bits (328), Expect = 4e-28
 Identities = 81/221 (36%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 291 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 350

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDK-ILILNDVYY 307
           SGAT H C+ L+   S         T+RV NG     +AVG + L + +  IL+L DV+Y
Sbjct: 351 SGATIHACNCLKAFRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFY 410

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 411 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 466

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 467 VVSSLTKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKN 507


>emb|CAE04255.4| OSJNBa0089N06.16 [Oryza sativa Japonica Group]
          Length = 1196

 Score =  130 bits (328), Expect = 4e-28
 Identities = 81/221 (36%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 257 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 316

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDK-ILILNDVYY 307
           SGAT H C+ L+   S         T+RV NG     +AVG + L + +  IL+L DV+Y
Sbjct: 317 SGATIHACNCLKAFRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFY 376

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 377 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 432

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 433 VVSSLTKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKN 473


>emb|CAE02960.2| OSJNBb0050N09.11 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  130 bits (328), Expect = 4e-28
 Identities = 81/221 (36%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 261 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 320

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDK-ILILNDVYY 307
           SGAT H C+ L+   S         T+RV NG     +AVG + L + +  IL+L DV+Y
Sbjct: 321 SGATIHACNCLKAFRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFY 380

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 381 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 436

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 437 VVSSLTKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKN 477


>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  130 bits (328), Expect = 4e-28
 Identities = 81/221 (36%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 261 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 320

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDK-ILILNDVYY 307
           SGAT H C+ L+   S         T+RV NG     +AVG + L + +  IL+L DV+Y
Sbjct: 321 SGATIHACNCLKAFRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFY 380

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 381 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 436

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 437 VVSSLTKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKN 477


>gb|ABF96044.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1395

 Score =  130 bits (328), Expect = 4e-28
 Identities = 81/221 (36%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 257 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 316

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDK-ILILNDVYY 307
           SGAT H C+ L+   S         T+RV NG     +AVG + L + +  IL+L DV+Y
Sbjct: 317 SGATIHACNCLKAFRSTRTTQRRESTIRVANGVEEKVEAVGDLPLELANGFILLLRDVFY 376

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 377 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 432

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 433 VVSSLTKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKN 473


>gb|AAD12997.1| gag-pol polyprotein [Zea mays]
          Length = 1406

 Score =  130 bits (327), Expect = 5e-28
 Identities = 80/219 (36%), Positives = 117/219 (53%), Gaps = 4/219 (1%)
 Frame = -3

Query: 648 SKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVDSGATN 469
           S P   C +C + GH KR CP+FL  + E+ K +    V ES  +   S +W +DS AT 
Sbjct: 251 SVPPDTCLYCKKTGHYKRKCPEFLQYLLESGKDQVTF-VNESLYLEYPSYSWWIDSSATV 309

Query: 468 HVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLN-IRDKILILNDVYYIPGFR 292
           HV +SLQ L + + L  G  T+RV NG   + +A+G I L  +   +L+L DV Y+P  R
Sbjct: 310 HVANSLQGLRTSQRLPKGRRTIRVANGVEAAVEAIGDIHLKLVNGFVLLLRDVLYVPSLR 369

Query: 291 RNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAEMFRVE 112
           RNLISVS+L +      F D   +I  + +D+  A   + LYL+  ++  ++N       
Sbjct: 370 RNLISVSRLDDQHIHCHFGDRQCVIQFDNKDVGLAIRRDMLYLL--SQSDVVNVLDIPEN 427

Query: 111 HPKP---KRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
            P     KR++   +  + LWH RLGHIS  RI  L K+
Sbjct: 428 DPASSGRKRKRSDGETSSKLWHYRLGHISRGRIESLVKE 466


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  130 bits (326), Expect = 6e-28
 Identities = 79/247 (31%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
 Frame = -3

Query: 726 ENCNKRNSNMNIALVCENLKGEKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKEN---- 559
           E   K+NSN ++ ++ +     K+        CF C E GH KR C K+L ++K+     
Sbjct: 198 EESIKKNSN-HVMVMHKRKPNNKKSGPAKDAECFFCKEAGHWKRNCKKYLEQLKQKQQDG 256

Query: 558 KKRKYDLLVLESCLVAKDSSTWVVDSGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVV 379
           K     + V+E  L    + +WV D+G+  H+C SLQ L     LA G   +RVGNGA V
Sbjct: 257 KSSTSGINVIEINLATSSTDSWVFDTGSVAHICKSLQGLKRSRSLARGEVDIRVGNGARV 316

Query: 378 SAKAVGVIKLNIRDKILI-LNDVYYIPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGR 202
           +A AVG + L++  ++++ LN+ Y IP   +N+IS S L    +     DN   +  N  
Sbjct: 317 AAVAVGTMPLSLPSRLVLELNNYYCIPALCKNVISASCLQAEGYGFRSVDNDCSVYYNDI 376

Query: 201 DICTAKLENRLYLIKPNEQPLLNAEMFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERI 22
               A + + LY++        N   + V +   KRQ+ +  + T++WH RLGHI+ +R+
Sbjct: 377 FYFHAPMMSGLYIV--------NLNGYSVYNINAKRQRPNDLNPTFIWHCRLGHINEKRM 428

Query: 21  NRLAKDG 1
            ++ +DG
Sbjct: 429 EKIHRDG 435


>gb|AAS98437.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1362

 Score =  129 bits (325), Expect = 8e-28
 Identities = 80/221 (36%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 253 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 312

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDKI-LILNDVYY 307
           SGAT H C+ L+   S         T+RV NG     +AVG + L + +   L+L DV+Y
Sbjct: 313 SGATIHACNCLKAFRSTRTTQGRESTIRVANGVEEKVEAVGDLPLELANGFTLLLRDVFY 372

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 373 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 428

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 429 VVSSLTKENKKRKRTPDVSSKLWHCRLGHISRGRIERLVKN 469


>emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]
          Length = 1356

 Score =  128 bits (322), Expect = 2e-27
 Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 4/226 (1%)
 Frame = -3

Query: 666 GEKQCSSKPKKNCFHCGEEGH*KRYCPKFLS-KVKENKKRKYDLLVLESCLVAKDSSTWV 490
           G +Q   K +  CF C + GH K+ C K+ + +VK  K     L+  E  L +   +TW 
Sbjct: 235 GPEQKKQKVEVTCFFCNKPGHTKKECTKYAAWRVK--KGMFLTLVCSEVNLASVSRNTWW 292

Query: 489 VDSGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRD-KILILNDV 313
           +DSGAT H+C S+Q   SY + +D    + VG+G  V  +A+G  +L ++    L L D 
Sbjct: 293 LDSGATTHICVSMQGCLSYRKPSDAERCIYVGDGQSVEVEAIGHFRLLLKSGYFLDLIDT 352

Query: 312 YYIPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLE--NRLYLIKPNEQPL 139
           + +P FRRNLISVS L +  +  SF +N   +S N   + T  L   + LYL++    P 
Sbjct: 353 FXVPSFRRNLISVSVLDKSGYCCSFGNNKFTLSINSNAVGTGLLNVYDNLYLLE--TVPS 410

Query: 138 LNAEMFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDG 1
            N E   VE    KR K+++D+   LWH RLGHIS  R+ RL  DG
Sbjct: 411 YN-ETLHVESRGTKR-KLNKDNSASLWHKRLGHISKSRVERLVSDG 454


>gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1390

 Score =  128 bits (322), Expect = 2e-27
 Identities = 82/221 (37%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 257 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 316

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDK-ILILNDVYY 307
           SGAT H C+ L+   S         T+RV NG V   +AVG + L + +  IL+L DV+Y
Sbjct: 317 SGATIHACNCLKAFRSTRTTQRRESTIRVANG-VEKVEAVGDLPLELANGFILLLRDVFY 375

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 376 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 431

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 432 VVSSLTKENKKRKRTPDVSSKLWHYRLGHISRGRIERLVKN 472


>gb|EEE61551.1| hypothetical protein OsJ_15889 [Oryza sativa Japonica Group]
          Length = 574

 Score =  127 bits (320), Expect = 3e-27
 Identities = 79/221 (35%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 176 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 235

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDKI-LILNDVYY 307
           SGAT H C+ L+   S         ++RV NG     +AVG + L + +   L+L DV+Y
Sbjct: 236 SGATIHACNCLKAFRSTRTTQGRESSIRVANGFEEKVEAVGDLPLELANGFTLLLRDVFY 295

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 296 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 351

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 352 VVSSLTKENKKRKRTSDVSSKLWHCRLGHISRGRIERLVKN 392


>emb|CAE03274.1| OSJNBa0011J08.29 [Oryza sativa Japonica Group]
           gi|38345864|emb|CAE01833.2| OSJNBa0064M23.6 [Oryza
           sativa Japonica Group]
          Length = 1148

 Score =  127 bits (320), Expect = 3e-27
 Identities = 79/221 (35%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
 Frame = -3

Query: 663 EKQCSSKPKKNCFHCGEEGH*KRYCPKFLSKVKENKKRKYDLLVLESCLVAKDSSTWVVD 484
           ++Q  +  K  C HC + GH K+ CP FL  +   K       V ES  V    STW +D
Sbjct: 227 QQQQFAVEKDQCLHCKKTGHYKKDCPDFLKMIMAKKGENIITFVNESHYVGYSRSTWWID 286

Query: 483 SGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRDKI-LILNDVYY 307
           SGAT H C+ L+   S         ++RV NG     +AVG + L + +   L+L DV+Y
Sbjct: 287 SGATIHACNCLKAFRSTRTTQGRESSIRVANGFEEKVEAVGDLPLELANGFTLLLRDVFY 346

Query: 306 IPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLENRLYLIKPNEQPLLNAE 127
           +P  +RNLISVSKL    +   F      +  N   I  A L + LYL+  +E    N  
Sbjct: 347 VPSLQRNLISVSKLDFDGYDCRFGSGKCELWHNNACIGLAVLRDELYLLSLSE----NVN 402

Query: 126 MFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKD 4
           +      + K++K + D  + LWH RLGHIS  RI RL K+
Sbjct: 403 VVSSLTKENKKRKRTSDVSSKLWHCRLGHISRGRIERLVKN 443


>emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]
          Length = 1354

 Score =  127 bits (318), Expect = 5e-27
 Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 4/226 (1%)
 Frame = -3

Query: 666 GEKQCSSKPKKNCFHCGEEGH*KRYCPKFLS-KVKENKKRKYDLLVLESCLVAKDSSTWV 490
           G +Q   K +  CF C + GH K+ C K+ + +VK  K     L+  E  L +   +TW 
Sbjct: 280 GPEQKKQKVEVTCFFCNKPGHTKKECTKYAAWRVK--KGMFLTLVCSEVNLASVSRNTWW 337

Query: 489 VDSGATNHVCSSLQMLSSYEELADGSFTMRVGNGAVVSAKAVGVIKLNIRD-KILILNDV 313
           +DSGAT H+C S+Q   SY + +D    + VG+G  V  +A+G  +L ++    L L D 
Sbjct: 338 LDSGATTHICVSMQGCLSYRKPSDAERCIYVGDGQSVEVEAIGHFRLLLKSGYFLDLIDT 397

Query: 312 YYIPGFRRNLISVSKLHEHLFSLSFNDNSIIISKNGRDICTAKLE--NRLYLIKPNEQPL 139
           + +P FR+NLISVS L +  +  SF +N   +S N   + T  L   + LYL++    P 
Sbjct: 398 FIVPSFRQNLISVSVLDKSGYCCSFGNNKFTLSINSNAVGTGLLNVYDNLYLLE--TVPS 455

Query: 138 LNAEMFRVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDG 1
            N E   VE    KR K+++D+   LWH RLGHIS  R+ RL  DG
Sbjct: 456 YN-ETLHVESRGTKR-KLNKDNSASLWHKRLGHISKSRVERLVSDG 499