BLASTX nr result
ID: Rehmannia22_contig00036850
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00036850
(371 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 prote... 96 5e-18
ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 prote... 93 4e-17
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 91 1e-16
gb|EOX96749.1| Cohesin subunit rad21, putative isoform 2 [Theobr... 67 2e-09
gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobr... 67 2e-09
emb|CBI24843.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|XP_006402677.1| hypothetical protein EUTSA_v10005819mg [Eutr... 57 3e-06
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops... 56 4e-06
ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidop... 56 4e-06
>ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
lycopersicum]
Length = 668
Score = 95.9 bits (237), Expect = 5e-18
Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIEDNSGSGPTPMDEDVPPPVELDTAAGLKD 184
+ITL DQ+ + +D Y+ I DE ++ S + SG G PM+ D P +TAA +
Sbjct: 140 EITLEDQVVSHEDQYVAIFIDEDIVKSLSKSGEVSGLGSMPMEIDSDPSNLDETAAQPQH 199
Query: 185 PSPSNLSGANDRNVGSKSPQDLPSIEFMRDATHGFDFNNSPILPDRA----APDEFLEEQ 352
SP N G N R VG PQD P IE MRDA H F N P+ DR PD LEEQ
Sbjct: 200 SSPKNQEGLNKRTVGDDIPQDFPDIELMRDAVHDHSFENVPLWSDRGNDVMEPDRVLEEQ 259
Query: 353 INKDKE 370
I +DKE
Sbjct: 260 IMRDKE 265
>ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
tuberosum]
Length = 675
Score = 92.8 bits (229), Expect = 4e-17
Identities = 54/126 (42%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIEDNSGSGPTPMDEDVPPPVELDTAAGLKD 184
+ITL DQI + +D Y+ I DE ++ S + SG G PM+ D P +T A +
Sbjct: 140 EITLEDQIVSHEDQYVAIFIDEDIVKSLSKSGEVSGLGAMPMEIDSDPSNPDETGAQPQH 199
Query: 185 PSPSNLSGANDRNVGSKSPQDLPSIEFMRDATHGFDFNNSPILPDRA----APDEFLEEQ 352
SP N G N R V PQD+P IE MRDA H F N P+ DR PD LEEQ
Sbjct: 200 SSPKNQEGLNKRTVCDDIPQDIPDIELMRDAVHDHSFENVPLWSDRGNDVMEPDRVLEEQ 259
Query: 353 INKDKE 370
I +DKE
Sbjct: 260 IMRDKE 265
>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
vinifera]
Length = 761
Score = 91.3 bits (225), Expect = 1e-16
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIEDNSGSGPTPMDEDVPPPVELDTAAGLKD 184
+ITLTDQIP G+DPYI I+FDE + D S E+ SG PMDEDV P ++ A +D
Sbjct: 140 EITLTDQIPIGRDPYIAITFDEDVMTDLSNHEEIPDSGVRPMDEDVVHPTPVEGRADFQD 199
Query: 185 PSPSNLSG-ANDRNVGSKSPQDLPSIEFMRDATHGFDFNNSPI 310
P S++ G +N+R P DLP IE MRDA H N P+
Sbjct: 200 PGLSDIMGQSNERLNEDNLPHDLPEIEVMRDAIHDLHSENLPV 242
>gb|EOX96749.1| Cohesin subunit rad21, putative isoform 2 [Theobroma cacao]
Length = 652
Score = 67.0 bits (162), Expect = 2e-09
Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 18/119 (15%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIE--DNSGS--------GPTPMDEDVPP-- 148
DITLTDQIP G DPY+ I+FDE +RD+S+ E SGS GP P DE V
Sbjct: 140 DITLTDQIPIGGDPYVAITFDEDIMRDASLPEVFQKSGSIQINDKLHGP-PEDEHVRSQD 198
Query: 149 -----PVELDTA-AGLKDPSPSNLSGANDRNVGSKSPQDLPSIEFMRDATHGFDFNNSP 307
+E+ +A A +DP SN S + ++ + S QD P IE +RDA F N P
Sbjct: 199 PGQHNQIEVPSASAAFQDPGRSNKSQVLE-SMSNDSSQDFPEIETIRDAPRDFYTENLP 256
>gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
Length = 677
Score = 67.0 bits (162), Expect = 2e-09
Identities = 50/119 (42%), Positives = 64/119 (53%), Gaps = 18/119 (15%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIE--DNSGS--------GPTPMDEDVPP-- 148
DITLTDQIP G DPY+ I+FDE +RD+S+ E SGS GP P DE V
Sbjct: 140 DITLTDQIPIGGDPYVAITFDEDIMRDASLPEVFQKSGSIQINDKLHGP-PEDEHVRSQD 198
Query: 149 -----PVELDTA-AGLKDPSPSNLSGANDRNVGSKSPQDLPSIEFMRDATHGFDFNNSP 307
+E+ +A A +DP SN S + ++ + S QD P IE +RDA F N P
Sbjct: 199 PGQHNQIEVPSASAAFQDPGRSNKSQVLE-SMSNDSSQDFPEIETIRDAPRDFYTENLP 256
>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIEDNSGSGPTPMDEDVPPPVELDTAAGLKD 184
+ITLTDQIP G+DPYI I+FDE ++ S++ N+ S L D
Sbjct: 140 EITLTDQIPIGRDPYIAITFDEVNILFPSLLNQNALS-----------------LCCLMD 182
Query: 185 PSPSNLSG-ANDRNVGSKSPQDLPSIEFMRDATHGFDFNNSPI 310
P S++ G +N+R P DLP IE MRDA H N P+
Sbjct: 183 PGLSDIMGQSNERLNEDNLPHDLPEIEVMRDAIHDLHSENLPV 225
>ref|XP_006402677.1| hypothetical protein EUTSA_v10005819mg [Eutrema salsugineum]
gi|557103776|gb|ESQ44130.1| hypothetical protein
EUTSA_v10005819mg [Eutrema salsugineum]
Length = 689
Score = 56.6 bits (135), Expect = 3e-06
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 30/123 (24%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIEDNSGSGPT---PMDEDVPPPVE------ 157
+ITLT QIPTG DPY+ I+FDE + SS ++ + + P P D DV E
Sbjct: 139 EITLTGQIPTGIDPYVAITFDEDIIPQSSPMDVDQSTVPASALPGDTDVEMAYEAEPNNE 198
Query: 158 -------LDTAA-----------GLKDPSPSNLS---GANDRNVGSKSPQDLPSIEFMRD 274
LDT +DP PSNL+ A+ + SP +P IE RD
Sbjct: 199 PGDINVGLDTGTYGPRNDTEEIPEFQDPRPSNLTEALNASPERGNAISPGSVPEIEIRRD 258
Query: 275 ATH 283
A H
Sbjct: 259 AAH 261
>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
Length = 692
Score = 56.2 bits (134), Expect = 4e-06
Identities = 45/154 (29%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIEDNSGSGPT----------------PMDE 136
DITLTDQIPTG DPY+ ++FDE + +S ++ + + P P +E
Sbjct: 139 DITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTEPVRRHTGEIDVETAHETGPDNE 198
Query: 137 DVPPPVELDTA-----------AGLKDPSPSNLSG---ANDRNVGSKSPQDLPSIEFMRD 274
+ DT ++DP SNL+ N + SP +P IE MRD
Sbjct: 199 PRDSNIAFDTGTYSPRNVTEEFTEVQDPRQSNLTEERIPNSERNDATSPGTVPEIERMRD 258
Query: 275 ATHGFDFNNSPILPD-----RAAPDEFLEEQINK 361
A H + P R E L+E +N+
Sbjct: 259 AAHDLSPTSHPSFAAQQQDVRVERTESLDETLNE 292
>ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidopsis thaliana]
gi|30913284|sp|Q9FQ19.2|SCC13_ARATH RecName: Full=Sister
chromatid cohesion 1 protein 3; AltName: Full=SCC1
homolog 3; Short=AtRAD21-2
gi|18157647|gb|AAL62059.1|AF400128_1 RAD21-2
[Arabidopsis thaliana] gi|6996291|emb|CAB75452.1|
putative protein [Arabidopsis thaliana]
gi|332646418|gb|AEE79939.1| sister chromatid cohesion 1
protein 3 [Arabidopsis thaliana]
Length = 693
Score = 56.2 bits (134), Expect = 4e-06
Identities = 45/154 (29%), Positives = 65/154 (42%), Gaps = 35/154 (22%)
Frame = +2
Query: 5 DITLTDQIPTGKDPYIVISFDEHDLRDSSIIEDNSGSGPT----------------PMDE 136
DITLTDQIPTG DPY+ ++FDE + +S ++ + + P P +E
Sbjct: 139 DITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTEPVSRHTGEIDVETAHETGPDNE 198
Query: 137 DVPPPVELDTA-----------AGLKDPSPSNLSG---ANDRNVGSKSPQDLPSIEFMRD 274
+ DT ++DP SNL+ N + SP +P IE MRD
Sbjct: 199 PRDSNIAFDTGTYSPRNVTEEFTEVQDPRQSNLTEERIPNSERNDATSPGTVPEIERMRD 258
Query: 275 ATHGFDFNNSPILPD-----RAAPDEFLEEQINK 361
A H + P R E L+E +N+
Sbjct: 259 AAHDLSPTSHPSFAAQQQDVRVERTESLDETLNE 292