BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00036776
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]   167   1e-39
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   154   2e-35
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   145   5e-33
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   145   5e-33
emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera]   144   9e-33
ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488...   144   1e-32
gb|AAU90262.1| integrase core domain containing protein [Oryza s...   144   1e-32
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc...   144   2e-32
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...   144   2e-32
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   143   3e-32
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc...   142   3e-32
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   142   5e-32
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  142   5e-32
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  142   5e-32
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     142   5e-32
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762...   141   1e-31
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   140   1e-31
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   139   3e-31
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc...   139   4e-31
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   139   4e-31

>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score =  167 bits (423), Expect = 1e-39
 Identities = 74/124 (59%), Positives = 94/124 (75%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           PF+LV+SDVW PA T SCDGYKYYI F+D FT +TWI+P   KS+  S VLQFI+L++R+
Sbjct: 501 PFELVFSDVWEPAHTTSCDGYKYYIAFVDAFTNYTWIYPRQQKSQATSIVLQFIALVDRK 560

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F +K+K  Q DWGGE+  L S  Q  GI+FRHPCP+ H QNG  ERKH+ IV++GLTLL+
Sbjct: 561 FPTKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHVHQQNGKVERKHRSIVEIGLTLLA 620

Query: 366 HAHL 377
            + L
Sbjct: 621 KSQL 624



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
 Frame = +3

Query: 6    PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
            P +L++ D++GP+ TPS  G  Y    +D+F+R+TW+  L  KSE +    +F + ++ +
Sbjct: 1094 PLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNE 1153

Query: 186  FSSKIKAFQCDWGGEYRK--LSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTL 359
                I   + D G E+       +    GI      P T  QNG+ ERK++ + ++  T+
Sbjct: 1154 KGFSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRTPQQNGVVERKNRTLQEMARTM 1213

Query: 360  LSHAHL 377
            L+  +L
Sbjct: 1214 LNENNL 1219


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  154 bits (388), Expect = 2e-35
 Identities = 67/124 (54%), Positives = 89/124 (71%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +L+++D+WGPA+TPS  G++YYIHF+D ++RFTWI+ L  KSE +   L F S +E Q
Sbjct: 562 PLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQ 621

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
              KIKA Q DWGGEYR  + +  S GI+ R  CPYTH QNG+ ERKH+HIV+ G+ LL+
Sbjct: 622 LGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLA 681

Query: 366 HAHL 377
            A L
Sbjct: 682 QASL 685


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  145 bits (366), Expect = 5e-33
 Identities = 66/124 (53%), Positives = 89/124 (71%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S    KYY+ F+D+F++FTWI+ +  KS+V+    +F  ++ERQ
Sbjct: 508 PLELVFSDVWGPAPE-SVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQ 566

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F  KI A Q DWGGEY+ L+S F  +GIV    CP+TH QNG  ERKH+HIV++GL+LLS
Sbjct: 567 FDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLS 626

Query: 366 HAHL 377
           HA +
Sbjct: 627 HASM 630


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  145 bits (366), Expect = 5e-33
 Identities = 68/124 (54%), Positives = 87/124 (70%)
 Frame = +3

Query: 6    PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
            P +LV+SDVWGPA T S  G KYY+ F+D+F++FTWI+ L SK+EV+    +F   +ER 
Sbjct: 1472 PLELVFSDVWGPAPT-SVGGRKYYVSFIDDFSKFTWIYLLKSKAEVFLKFQEFQQRVERL 1530

Query: 186  FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
            F+ KI + Q DWGGEY KL S F  +GI     CPY H QNG  ERKH+HIV++GL LLS
Sbjct: 1531 FNRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLS 1590

Query: 366  HAHL 377
            HA +
Sbjct: 1591 HASM 1594


>emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera]
          Length = 467

 Score =  144 bits (364), Expect = 9e-33
 Identities = 65/124 (52%), Positives = 84/124 (67%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +L+YSD+WGPA   S  G +YYI FLD+ T+F WIFPL  KS    T + F +++ERQ
Sbjct: 149 PLELIYSDIWGPAPVLSTSGARYYISFLDDATKFLWIFPLKLKSNACQTFIHFQAIVERQ 208

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F +KIKA Q DW GEYR ++ H Q+ GI  R  CPYTH Q    ER+H  IV++GL LL+
Sbjct: 209 FDTKIKALQSDWDGEYRSITKHLQNQGISHRITCPYTHQQASAIERRHXQIVEVGLALLA 268

Query: 366 HAHL 377
           H +L
Sbjct: 269 HYNL 272


>ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488260 [Cicer arietinum]
          Length = 752

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/120 (54%), Positives = 81/120 (67%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P DL++S VWGPA   S   +KYY+HF+D+F+RFTWIFPL  K E      QF +++E Q
Sbjct: 476 PLDLIHSGVWGPAPILSPSNFKYYVHFIDDFSRFTWIFPLKQKPETVHAFTQFKNMVENQ 535

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           FS KIK  QCD GGEY+ +       GI FR  CPYT  QNG  ERKH+H+ +LGLTLL+
Sbjct: 536 FSKKIKILQCDGGGEYKPVQKIAIESGIQFRMSCPYTSQQNGRAERKHRHVAELGLTLLA 595


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
           Group] gi|108710062|gb|ABF97857.1| retrotransposon
           protein, putative, Ty1-copia subclass, expressed [Oryza
           sativa Japonica Group]
          Length = 1021

 Score =  144 bits (363), Expect = 1e-32
 Identities = 67/124 (54%), Positives = 87/124 (70%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S  G KYY+ F+D+F++FTWI+ L  KSEV     +F  L+ER 
Sbjct: 429 PLELVFSDVWGPAPD-SVGGRKYYVSFIDDFSKFTWIYLLKKKSEVLQKFSEFQQLVERL 487

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F+ KI A Q DWGGEY KL++ F  +GI     CPY H QNG  ERKH+HIV++GL+LL+
Sbjct: 488 FNRKIIAMQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLA 547

Query: 366 HAHL 377
           HA +
Sbjct: 548 HASM 551


>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1177

 Score =  144 bits (362), Expect = 2e-32
 Identities = 63/124 (50%), Positives = 92/124 (74%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +L++SDVWGPA+  S    +YY+ F+D++++F WI+ L  KSEV+    +F S++ERQ
Sbjct: 391 PLELIHSDVWGPASD-SVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQ 449

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F+ KI   Q DWGGEY+KL+S F+ +GI  +  CP+TH QNG  ERKH+HIV++GL+LL+
Sbjct: 450 FNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLA 509

Query: 366 HAHL 377
           HA +
Sbjct: 510 HASM 513


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
           sativa Japonica Group]
           gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
           protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  144 bits (362), Expect = 2e-32
 Identities = 63/124 (50%), Positives = 92/124 (74%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +L++SDVWGPA+  S    +YY+ F+D++++F WI+ L  KSEV+    +F S++ERQ
Sbjct: 502 PLELIHSDVWGPASD-SVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQ 560

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F+ KI   Q DWGGEY+KL+S F+ +GI  +  CP+TH QNG  ERKH+HIV++GL+LL+
Sbjct: 561 FNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLA 620

Query: 366 HAHL 377
           HA +
Sbjct: 621 HASM 624


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  143 bits (360), Expect = 3e-32
 Identities = 65/125 (52%), Positives = 92/125 (73%)
 Frame = +3

Query: 3   APFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIER 182
           AP  L++SDV+GPA   S   YKYY+ F+D++++FTWI+ L  KS+VY +  +F  L+ER
Sbjct: 513 APLMLIFSDVFGPAID-SFGRYKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLVER 571

Query: 183 QFSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLL 362
            F  KI AFQ DWGGEY KL++HF+++GI  +  CP+TH QNG  ERKH+HIV++GL LL
Sbjct: 572 MFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALL 631

Query: 363 SHAHL 377
           + + +
Sbjct: 632 AQSSM 636


>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1016

 Score =  142 bits (359), Expect = 3e-32
 Identities = 66/122 (54%), Positives = 86/122 (70%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S +  KYY+ F+D+F++FTWI+ L +KSEV+S   +F   +ER 
Sbjct: 125 PLELVFSDVWGPAPV-SVESRKYYVSFIDDFSKFTWIYLLKNKSEVFSKFHEFQQRVERL 183

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F+ KI + Q DWGGEY KL S F  +GI     CPY H QNG  ERKH+HIV++GL LL+
Sbjct: 184 FNRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLA 243

Query: 366 HA 371
           HA
Sbjct: 244 HA 245


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score =  142 bits (358), Expect = 5e-32
 Identities = 66/124 (53%), Positives = 89/124 (71%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S    KYY+ F+D+F++FTWI+ L  KSEV+    +F +L+ER 
Sbjct: 517 PLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERM 575

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F  KI A Q DWGGEY+KL+S F  +GI     CP+TH QNG  ERKH+HI+++GL+LLS
Sbjct: 576 FDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLS 635

Query: 366 HAHL 377
           +A +
Sbjct: 636 YASM 639


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  142 bits (358), Expect = 5e-32
 Identities = 66/124 (53%), Positives = 89/124 (71%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S    KYY+ F+D+F++FTWI+ L  KSEV+    +F +L+ER 
Sbjct: 517 PLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERM 575

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F  KI A Q DWGGEY+KL+S F  +GI     CP+TH QNG  ERKH+HI+++GL+LLS
Sbjct: 576 FDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLS 635

Query: 366 HAHL 377
           +A +
Sbjct: 636 YASM 639


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  142 bits (358), Expect = 5e-32
 Identities = 66/124 (53%), Positives = 89/124 (71%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S    KYY+ F+D+F++FTWI+ L  KSEV+    +F +L+ER 
Sbjct: 514 PLELVFSDVWGPAPE-SVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERM 572

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F  KI A Q DWGGEY+KL+S F  +GI     CP+TH QNG  ERKH+HI+++GL+LLS
Sbjct: 573 FDRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLS 632

Query: 366 HAHL 377
           +A +
Sbjct: 633 YASM 636


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  142 bits (358), Expect = 5e-32
 Identities = 67/124 (54%), Positives = 86/124 (69%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S  G KYY+ F+D+F++FTWI+ L  KSEV+    +F  L+ER 
Sbjct: 505 PLELVFSDVWGPAPD-SVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERI 563

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F  KI A Q DWGGEY KL   F  +GI     CP+TH QNG  ERKH+HIV++GL+LL+
Sbjct: 564 FYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLA 623

Query: 366 HAHL 377
           HA +
Sbjct: 624 HASM 627


>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
          Length = 866

 Score =  141 bits (355), Expect = 1e-31
 Identities = 63/125 (50%), Positives = 89/125 (71%)
 Frame = +3

Query: 3   APFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIER 182
           AP +L+YSDVWGPA T S     YY+ F+D+++++TWI+ L  KS+V+    +F  L+ER
Sbjct: 425 APLELIYSDVWGPAPT-SIGRSTYYVSFIDDYSKYTWIYLLKHKSDVFRVFQEFQQLVER 483

Query: 183 QFSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLL 362
           + S KI   Q DWGGEY KL+S F+ +GI  R  CP+TH QNG  ERKH+HI+++GL LL
Sbjct: 484 KLSKKILCIQSDWGGEYEKLNSFFKKIGISHRVSCPHTHQQNGAAERKHRHIIEVGLALL 543

Query: 363 SHAHL 377
           ++A +
Sbjct: 544 ANASM 548


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/124 (52%), Positives = 88/124 (70%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +LV+SDVWGPA   S    KYY+ F+D++++FTWI+ L  KSEV+    +F SL+ER 
Sbjct: 512 PLELVFSDVWGPAPQ-SVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERL 570

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F+ KI A Q DWGGEY+KL S F  +GI     CP+TH QNG  ERKH+HIV++GL LL+
Sbjct: 571 FNRKIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLA 630

Query: 366 HAHL 377
           ++ +
Sbjct: 631 YSSM 634


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score =  139 bits (351), Expect = 3e-31
 Identities = 63/124 (50%), Positives = 88/124 (70%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +L+YSDVWGPA T S  G +YY+ F+ ++++FTW++ +  KSEV     +F +L+ER 
Sbjct: 514 PLELIYSDVWGPALT-SVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERL 572

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F+ KI A Q DWGGEY KL S F  +GI     CP+TH QNG  ERKH+HIV++GLTLL+
Sbjct: 573 FNRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLA 632

Query: 366 HAHL 377
           ++ +
Sbjct: 633 YSSM 636


>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1001

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/122 (54%), Positives = 84/122 (68%)
 Frame = +3

Query: 12  DLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQFS 191
           +LVYSDVWGPA T S     YY+ F+D+F++FTWI+ L  KSEV     +F+S +ER   
Sbjct: 255 ELVYSDVWGPA-TDSVGRKNYYVSFIDDFSKFTWIYFLKYKSEVLQKFQEFLSFVERLLD 313

Query: 192 SKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLSHA 371
            KI A Q DWGGEY KL+S F  +GI  R  CP+ H QNG  ERKH+HIV++GL LL+HA
Sbjct: 314 RKIIAMQTDWGGEYEKLNSFFTKIGISHRVSCPHAHQQNGAAERKHRHIVEVGLALLAHA 373

Query: 372 HL 377
            +
Sbjct: 374 SM 375


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1431

 Score =  139 bits (350), Expect = 4e-31
 Identities = 63/124 (50%), Positives = 87/124 (70%)
 Frame = +3

Query: 6   PFDLVYSDVWGPAATPSCDGYKYYIHFLDEFTRFTWIFPLVSKSEVYSTVLQFISLIERQ 185
           P +L++SDVWGPA+  S    KYY+ F+D++++F WI+ L  KSEV+    +F  L+ERQ
Sbjct: 501 PLELIHSDVWGPASE-SVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVERQ 559

Query: 186 FSSKIKAFQCDWGGEYRKLSSHFQSLGIVFRHPCPYTHAQNGMPERKHQHIVDLGLTLLS 365
           F  KI + Q DWGGEY KL + F  +GI     CP+TH QNG  ERKH+HIV++GL+LL+
Sbjct: 560 FDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLA 619

Query: 366 HAHL 377
           HA +
Sbjct: 620 HASM 623