BLASTX nr result

ID: Rehmannia22_contig00036754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00036754
         (435 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arab...    63   4e-08
ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp....    63   4e-08
ref|XP_002888282.1| predicted protein [Arabidopsis lyrata subsp....    60   2e-07

>ref|XP_002883251.1| hypothetical protein ARALYDRAFT_342203 [Arabidopsis lyrata subsp.
           lyrata] gi|297329091|gb|EFH59510.1| hypothetical protein
           ARALYDRAFT_342203 [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
 Frame = -1

Query: 417 LGIHKEVWQMFERVGWTAFMQGRWPTYKTLALEFLSTVQV---TETRPQNEPRKIHFKLG 247
           L + + V  +FE++G + F+  R  TY  L  +FL+TV+V    + R   +   IHF + 
Sbjct: 62  LHLSQTVSTLFEKMGLSDFVNKRHLTYTELTKDFLATVEVLQEPDCRLTGKNGAIHFVVA 121

Query: 246 NEWRNVTIAELNRIFGVPSDVPYRTAANYDSRAFWRLLTETPKTGLMQYAARSSKASSLR 67
           NE   VT  +L  IFG+      + +   D + +W  +      G  +Y +   KA+ LR
Sbjct: 122 NENHIVTFDDLANIFGLQKGFEMKYSKVQDPQQYWDAI-----GGTGRYNSGKVKAAQLR 176

Query: 66  NPIFRYIQKLMVHSVFAR 13
           +P  RY  +++ ++ FAR
Sbjct: 177 HPAVRYAHRVLANTFFAR 194


>ref|XP_002862843.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308590|gb|EFH39101.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
 Frame = -1

Query: 417 LGIHKEVWQMFERVGWTAFMQGRWPTYKTLALEFLSTVQV---TETRPQNEPRKIHFKLG 247
           L + + V  +FE++G + F+  R  TY  L  +FL+TV+V    + R   +   IHF + 
Sbjct: 62  LHLSQTVSTLFEKMGLSDFVNKRHLTYTELTKDFLATVEVLQEPDCRLTGKNGAIHFVVA 121

Query: 246 NEWRNVTIAELNRIFGVPSDVPYRTAANYDSRAFWRLLTETPKTGLMQYAARSSKASSLR 67
           NE   VT  +L  IFG+      + +   D + +W  +      G  +Y +   KA+ LR
Sbjct: 122 NENHIVTFDDLANIFGLQKGFEMKYSKVQDPQQYWDAI-----GGTGRYNSGKVKAAQLR 176

Query: 66  NPIFRYIQKLMVHSVFAR 13
           +P  RY  +++ ++ FAR
Sbjct: 177 HPAVRYAHRVLANTFFAR 194


>ref|XP_002888282.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334123|gb|EFH64541.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 264

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
 Frame = -1

Query: 423 RALGIHKEVWQMFERVGWTAFMQGRWPTYKTLALEFLSTVQVTETRPQNEPRK---IHFK 253
           R +G+ + V  + +R+G +      +PT++    +FLSTV+V   +P+++      + FK
Sbjct: 54  RQMGLAEGVDDLLQRIGMSCLKDMYYPTFEEETRDFLSTVKVEYEKPRDKVASQGLMTFK 113

Query: 252 LGNEWRNVTIAELNRIFGVPSDVPYRTAANYDSRAFWRLLTETPKTGLMQYAARSSKASS 73
           + N+   +TI ++  ++G            + +   W  +          Y    +K + 
Sbjct: 114 IRNKGYGLTIFDICEVYGFSKGEAVSFDTFHGANYLWNRIANG------NYKTHGAKMTG 167

Query: 72  LRNPIFRYIQKLMVHSVFARYNKG 1
           +RNP+ RY+ KL+ ++ FAR + G
Sbjct: 168 IRNPVIRYVCKLLANTFFARKDAG 191


Top