BLASTX nr result
ID: Rehmannia22_contig00036542
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00036542
(495 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 62 8e-08
gb|ESW30650.1| hypothetical protein PHAVU_002G171400g [Phaseolus... 61 2e-07
gb|ABK28206.1| unknown [Arabidopsis thaliana] 59 9e-07
ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-lik... 59 9e-07
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [... 57 2e-06
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 57 3e-06
ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844... 56 4e-06
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 56 6e-06
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 6e-06
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 56 6e-06
ref|XP_004966665.1| PREDICTED: uncharacterized protein LOC101779... 55 7e-06
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [... 55 1e-05
ref|XP_002528986.1| conserved hypothetical protein [Ricinus comm... 55 1e-05
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 62.0 bits (149), Expect = 8e-08
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +3
Query: 12 DDICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSL--DKD 185
DD C C ETI HIL CP A+ +W I ++ G S+ S S S++ L D
Sbjct: 1080 DDGCLMCDTENETINHILFECPLARQVWAITHLSSAG-SEFSNSVYTNMSRLIDLTQQND 1138
Query: 186 IPSENRIQLSTYLLWWLWKTRNMWLFENTWMHELATVESAISEWHDF 326
+P R +S ++LW+LWK RN LFE V+ A +H++
Sbjct: 1139 LPHHLRF-VSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEW 1184
>gb|ESW30650.1| hypothetical protein PHAVU_002G171400g [Phaseolus vulgaris]
Length = 1235
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 VLIDDICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLW-WSKICSLD 179
++I +C CG ET+EH+ + CP + +W + W KE SF LW W K+ +
Sbjct: 1135 LVISPLCPICGTEPETVEHVFLFCPWTRPLWFGSDFQWRVDVKEVQSFQLWLWHKLMEIQ 1194
Query: 180 KDIPSENRIQLSTY---LLWWLWKTRNMWLFE 266
+ P EN Q+S + W +WK RN ++ E
Sbjct: 1195 RVYP-ENANQISAQVGSICWSIWKGRNEFVLE 1225
>gb|ABK28206.1| unknown [Arabidopsis thaliana]
Length = 293
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Frame = +3
Query: 21 CKCCGDSVETIEHILISCPRAQAIWKIAPVNW--DGLSKESVSFPLWWSKICSLDKDIPS 194
C C DS ET+ H+L C A+ +W I+P+ +G +S+ L+W + +L+ +IP
Sbjct: 12 CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYW--VLNLEVEIPK 69
Query: 195 ENRI-QLSTYLLWWLWKTRNMWLFENTWMHELATVESAI---SEWHDFQGTVTRASAPKM 362
+I L +LLW LWK+RN +F+ + A+ EW + +AS P++
Sbjct: 70 LGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQV 129
Query: 363 K 365
+
Sbjct: 130 E 130
>ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-like superfamily
protein [Arabidopsis thaliana] gi|3337363|gb|AAC27408.1|
putative non-LTR retroelement reverse transcriptase
[Arabidopsis thaliana] gi|91805481|gb|ABE65469.1|
hypothetical protein At2g34320 [Arabidopsis thaliana]
gi|330253864|gb|AEC08958.1| polynucleotidyl transferase,
ribonuclease H-like superfamily protein [Arabidopsis
thaliana]
Length = 292
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Frame = +3
Query: 21 CKCCGDSVETIEHILISCPRAQAIWKIAPVNW--DGLSKESVSFPLWWSKICSLDKDIPS 194
C C DS ET+ H+L C A+ +W I+P+ +G +S+ L+W + +L+ +IP
Sbjct: 12 CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYW--VLNLEVEIPK 69
Query: 195 ENRI-QLSTYLLWWLWKTRNMWLFENTWMHELATVESAI---SEWHDFQGTVTRASAPKM 362
+I L +LLW LWK+RN +F+ + A+ EW + +AS P++
Sbjct: 70 LGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQV 129
Query: 363 K 365
+
Sbjct: 130 E 130
>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
Length = 509
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/105 (24%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +3
Query: 18 ICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSLD-KDIPS 194
+C C ++ E++EH+ + CP A+W +P+N+ ++ +F W + + L+ I
Sbjct: 278 MCPVCENNEESVEHLFLLCPWTAAVWFGSPLNYRVHNQSITTFDNWLNSMFQLNLTSILD 337
Query: 195 ENRIQ-LSTYLLWWLWKTRNMWLFENTWMHELATVESAISEWHDF 326
NR+ + +++LW +WK R ++ E +H + + A+ ++F
Sbjct: 338 RNRLMTIISFILWEIWKARCKFVIEGRQLHPIHVLHQAMRAANEF 382
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +3
Query: 12 DDICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSLDKDIP 191
+ +C CG E+I H+L CP ++ IW ++P+ S + + S K+
Sbjct: 961 EKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFD 1020
Query: 192 -SENRIQLSTYLLWWLWKTRNMWLFENTWMHELATVESAISE 314
+E+ +++ ++LW++WK+RN ++FEN ++ AI E
Sbjct: 1021 IAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQE 1062
>ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844438 [Brachypodium
distachyon]
Length = 2492
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 18 ICKCCGDSVETIEHILISCPRAQAIWKIAPVNWD---GLSKESVSFPLWWSKICSLDKDI 188
+C C E H++I C A+ +W + V W ++ S S WW +I S K
Sbjct: 2025 LCLLCDQVQEGAAHLMIHCVFAKEVWHASSVKWPRVGAVAAASPSLRTWWRQIISGPKSA 2084
Query: 189 PSENRIQLSTYLLWWLWKTRNMWLFENTWMHELA 290
+ I ++ + W LWK RN +F+ M+ A
Sbjct: 2085 SKDKEIAMAALIAWHLWKERNSRVFQQKEMNAAA 2118
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 55.8 bits (133), Expect = 6e-06
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Frame = +3
Query: 9 IDDICKCCGDSVETIEHILISCPRAQAIWKIA--PVNWDGLSKESVSFPLWWSKICSLDK 182
ID C+ CG+ E+I H+L +C A+ +W ++ P + G S+ + +
Sbjct: 1082 IDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTSQFGFQNSSIFANIQYLLELKGKG 1141
Query: 183 DIPSENRIQLSTYLLWWLWKTRNMWLFENTWMHELATVESA---ISEWHDFQGTVTRASA 353
IP + + + ++LW LWK R+ FE T L ++E + EW Q V A
Sbjct: 1142 LIPEQIK-KSWPWVLWRLWKNRDKLFFEGTIFSPLKSIEKIRDDVQEWFLAQALVASVDA 1200
Query: 354 PKMKSAAAC 380
+ +A C
Sbjct: 1201 GETVCSAPC 1209
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/107 (28%), Positives = 48/107 (44%)
Frame = +3
Query: 9 IDDICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSLDKDI 188
ID C CG+ ET EH++ C + W I+P+ + E+ SF +W + KD
Sbjct: 1088 IDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKD- 1146
Query: 189 PSENRIQLSTYLLWWLWKTRNMWLFENTWMHELATVESAISEWHDFQ 329
L + W +W RN W+FE + VE A+ +F+
Sbjct: 1147 --TEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFE 1191
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 55.8 bits (133), Expect = 6e-06
Identities = 32/104 (30%), Positives = 48/104 (46%)
Frame = +3
Query: 3 VLIDDICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSLDK 182
VLI+D C C + ET+ HIL CP A+ +W + P+ F I +
Sbjct: 807 VLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPMQSPNHGFGDSIFTNVNHVIGNCHN 866
Query: 183 DIPSENRIQLSTYLLWWLWKTRNMWLFENTWMHELATVESAISE 314
S + +S +++W LWK RN LFE L+ V A+ +
Sbjct: 867 TELSPHLRYVSPWIIWILWKNRNKRLFEGIGSVSLSIVGKALED 910
>ref|XP_004966665.1| PREDICTED: uncharacterized protein LOC101779074 [Setaria italica]
Length = 170
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/92 (31%), Positives = 51/92 (55%)
Frame = +3
Query: 18 ICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSLDKDIPSE 197
+C CG+ E HIL+ CP A+ +W+ + W + + + F W+ + +L + P
Sbjct: 50 LCAYCGEH-EDQHHILLQCPPAKLVWRA--IGWPA-APDLLDFRELWA-LPALPDETPPA 104
Query: 198 NRIQLSTYLLWWLWKTRNMWLFENTWMHELAT 293
R + T +LW +WK RN W+F+++ +H AT
Sbjct: 105 VRSAIITAILWNIWKARNSWIFDSS-LHSAAT 135
>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 55.1 bits (131), Expect = 1e-05
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 VLIDDICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSLDK 182
++ C C E+ EH + CP QA+W +P+N+ + +F W++ + +
Sbjct: 639 IISSPFCPICNQYEESEEHAIFLCPWTQAVWFGSPLNYRVNPQSITTFDRWFTGLLNSQM 698
Query: 183 DIPSEN--RIQLSTYLLWWLWKTRNMWLFENTWMHELATVESAISEWHDF 326
SE + L +++ W +WK R +LFE+ + VE A S +F
Sbjct: 699 FSKSERVWVLSLVSFISWEIWKARCKFLFEDITIDPRCVVERAASAAEEF 748
>ref|XP_002528986.1| conserved hypothetical protein [Ricinus communis]
gi|223531576|gb|EEF33405.1| conserved hypothetical
protein [Ricinus communis]
Length = 133
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 9 IDDICKCCGDSVETIEHILISCPRAQAIWKIAPVNWDGLSKESVSFPLWWSKICSLDKDI 188
+D C+ CG + ET H+ CP AQ +W+I+ ++ S L W +C+
Sbjct: 31 VDGTCQRCG-AWETSGHLFFLCPFAQYVWRISSLSIIPSVFHVTSITLVWDHLCATLWSF 89
Query: 189 PSENR-IQLSTYLLWWLWKTRNMWLFENTWMHELATVESA 305
+ ++ + LW WK RN ++F+N W+ E + A
Sbjct: 90 QLDQEPYKIIAHTLWQHWKARNKFVFDNHWLQETDIISQA 129