BLASTX nr result

ID: Rehmannia22_contig00036517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00036517
         (366 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357776.1| PREDICTED: U-box domain-containing protein 4...    55   2e-07
ref|XP_006357777.1| PREDICTED: U-box domain-containing protein 4...    55   2e-07
ref|XP_004231992.1| PREDICTED: U-box domain-containing protein 4...    55   1e-05
ref|XP_004231991.1| PREDICTED: U-box domain-containing protein 4...    55   1e-05

>ref|XP_006357776.1| PREDICTED: U-box domain-containing protein 4-like isoform X1
           [Solanum tuberosum]
          Length = 389

 Score = 54.7 bits (130), Expect(2) = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 213 TIPI*AAKDIRRLIKTLQRYRRHFSDAVEPLVDML 317
           T+ + AAK+IRRL KT QRYRRHFS+AV+PLVDML
Sbjct: 48  TLKVQAAKEIRRLTKTSQRYRRHFSNAVKPLVDML 82



 Score = 26.2 bits (56), Expect(2) = 2e-07
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 185 QSTLVLLHSDDPNLSGQ 235
           Q TL L+HSDDP L  Q
Sbjct: 36  QQTLFLIHSDDPTLKVQ 52


>ref|XP_006357777.1| PREDICTED: U-box domain-containing protein 4-like isoform X2
           [Solanum tuberosum]
          Length = 373

 Score = 54.7 bits (130), Expect(2) = 2e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +3

Query: 213 TIPI*AAKDIRRLIKTLQRYRRHFSDAVEPLVDML 317
           T+ + AAK+IRRL KT QRYRRHFS+AV+PLVDML
Sbjct: 48  TLKVQAAKEIRRLTKTSQRYRRHFSNAVKPLVDML 82



 Score = 26.2 bits (56), Expect(2) = 2e-07
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 185 QSTLVLLHSDDPNLSGQ 235
           Q TL L+HSDDP L  Q
Sbjct: 36  QQTLFLIHSDDPTLKVQ 52


>ref|XP_004231992.1| PREDICTED: U-box domain-containing protein 4-like isoform 2
           [Solanum lycopersicum]
          Length = 373

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
 Frame = +3

Query: 189 QRSCFCIR----TIPI*AAKDIRRLIKTLQRYRRHFSDAVEPLVDML 317
           Q++ F I+    T+ + AAK+IRRL KT QRYRRHFS+AV+PLVDML
Sbjct: 36  QQTLFLIQSDDPTLKVQAAKEIRRLTKTSQRYRRHFSNAVKPLVDML 82


>ref|XP_004231991.1| PREDICTED: U-box domain-containing protein 4-like isoform 1
           [Solanum lycopersicum]
          Length = 389

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
 Frame = +3

Query: 189 QRSCFCIR----TIPI*AAKDIRRLIKTLQRYRRHFSDAVEPLVDML 317
           Q++ F I+    T+ + AAK+IRRL KT QRYRRHFS+AV+PLVDML
Sbjct: 36  QQTLFLIQSDDPTLKVQAAKEIRRLTKTSQRYRRHFSNAVKPLVDML 82


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