BLASTX nr result
ID: Rehmannia22_contig00036139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00036139
(392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 62 4e-15
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 61 5e-15
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 62 7e-15
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 59 4e-14
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 60 5e-14
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 62 7e-14
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 59 2e-13
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 60 3e-13
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 60 3e-13
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 57 7e-13
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In... 58 2e-12
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 55 2e-12
gb|AAW56918.1| putative polyprotein [Oryza sativa Japonica Group] 57 2e-12
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 55 2e-12
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 55 2e-12
gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subc... 57 3e-12
ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|2349... 58 6e-12
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 53 1e-11
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc... 55 1e-11
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera] 58 1e-11
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 61.6 bits (148), Expect(2) = 4e-15
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIEV GI+LTQ+KY +L +VNMS K + TP+ S LS +GN
Sbjct: 744 DLGRLHYFLGIEVKEVNDGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGN 802
Score = 45.1 bits (105), Expect(2) = 4e-15
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T LH LGF +SK+DT LFF+ IF+ +Y
Sbjct: 673 QAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVTIFMLVY 715
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 61.2 bits (147), Expect(2) = 5e-15
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIEV GI+LTQ+KY +L +VNMS K + TP+ S LS +GN
Sbjct: 1006 DLGRLHYFLGIEVKELNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGN 1064
Score = 45.1 bits (105), Expect(2) = 5e-15
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T LH LGF +SK+DT LFF+ IF+ +Y
Sbjct: 935 QAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVTIFMLVY 977
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 61.6 bits (148), Expect(2) = 7e-15
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIEV GI+LTQ+KY +L +VNMS K + TP+ S LS +GN
Sbjct: 1144 DLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGN 1202
Score = 44.3 bits (103), Expect(2) = 7e-15
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW 299
QA +AW+ +L T LH LGF +SK+DT LFF+
Sbjct: 1073 QAPRAWYSRLSTKLHELGFKSSKSDTSLFFY 1103
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 58.9 bits (141), Expect(2) = 4e-14
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
DLG LH+FLGIEV GIL++Q+KY LL +VNMS K +ATP+ +S L +G
Sbjct: 1145 DLGDLHYFLGIEVTKIPGGILMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKG 1202
Score = 44.3 bits (103), Expect(2) = 4e-14
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L LH LGF SKADT LFF+ IFL +Y
Sbjct: 1074 QAPRAWYSRLSGKLHDLGFKGSKADTSLFFYNKGSLTIFLLIY 1116
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 60.5 bits (145), Expect(2) = 5e-14
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG L++FLGIEVN GI+LTQ KY LL KV MS K ++TP+ +S LS +G+
Sbjct: 1027 DLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGS 1085
Score = 42.4 bits (98), Expect(2) = 5e-14
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L L SLGF ASKADT LFF+ IF+ +Y
Sbjct: 956 QAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVY 998
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 62.4 bits (150), Expect(2) = 7e-14
Identities = 29/59 (49%), Positives = 43/59 (72%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIEVN + GI+LTQ+KY+ LL +V M+ K ++TP+ +S L+ +G+
Sbjct: 970 DLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGD 1028
Score = 40.0 bits (92), Expect(2) = 7e-14
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ KL L LGF SKADT LFF+ IF+ +Y
Sbjct: 899 QAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVY 941
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 59.3 bits (142), Expect(2) = 2e-13
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIE GILL+Q+KY++ LL ++NM K ++TP+ + LS QG+
Sbjct: 1046 DLGELHYFLGIEATKVCDGILLSQEKYVKDLLKRINMDKCKPVSTPLSPTEKLSIHQGD 1104
Score = 42.0 bits (97), Expect(2) = 2e-13
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T L LGF SKADT LFF+ IF+ +Y
Sbjct: 975 QAPRAWYSRLSTKLQELGFMPSKADTSLFFYSKGDVIIFVLIY 1017
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 60.1 bits (144), Expect(2) = 3e-13
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIEV + GI+LTQ KY+ LL +VNM K ++TP+ +S LS +G+
Sbjct: 961 DLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGD 1019
Score = 40.4 bits (93), Expect(2) = 3e-13
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L L+ +GF SKADT LFF+ IF+ +Y
Sbjct: 890 QAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIY 932
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 60.5 bits (145), Expect(2) = 3e-13
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIEVN T I+LTQ KY LL +VNM K ++TP+ +S LS +G+
Sbjct: 1161 DLGDLHYFLGIEVNKVTDEIILTQDKYACDLLRRVNMFDCKPVSTPLSTSEKLSAHEGD 1219
Score = 39.7 bits (91), Expect(2) = 3e-13
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L L+ LGF SK DT LFF+ IF+ +Y
Sbjct: 1090 QAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIY 1132
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 57.4 bits (137), Expect(2) = 7e-13
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILS 16
DLG LH+FLGIEV T Q +LL+Q++Y +LL +VNM+ K ++TP+ ++ LS
Sbjct: 606 DLGDLHYFLGIEVKRTPQTLLLSQERYTTELLERVNMTSCKPVSTPLSTAEKLS 659
Score = 41.6 bits (96), Expect(2) = 7e-13
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW 299
QA +AW+ +L L LGFS+SKADT LFF+
Sbjct: 535 QAPRAWYSRLSKKLQELGFSSSKADTSLFFY 565
>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
gi|289065044|ref|YP_003433855.1| hypothetical protein
OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
protein (mitochondrion) [Oryza sativa Japonica Group]
gi|74100220|gb|AAZ99382.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
protein [Oryza sativa Indica Group]
gi|353685219|gb|AER12982.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685288|gb|AER13050.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277649|gb|AEZ03755.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277659|gb|AEZ03764.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540457|dbj|BAN67511.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540460|dbj|BAN67513.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 490
Score = 58.2 bits (139), Expect(2) = 2e-12
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
DLG+LH+FLGIEVN GI+LTQ+KY LL +V M G K + TP+ ++ L +G
Sbjct: 207 DLGALHYFLGIEVNKVHDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEG 264
Score = 39.7 bits (91), Expect(2) = 2e-12
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AWF +L L +LGF SKAD LFF+ IF+ +Y
Sbjct: 136 QAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIY 178
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
DLG LH+FLGIEV+ G++L+Q+KY LL +V M K ++TP+ +S LS +G
Sbjct: 1107 DLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEG 1164
Score = 42.4 bits (98), Expect(2) = 2e-12
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T L LGF SKADT LFF+ IFL +Y
Sbjct: 1036 QAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIY 1078
>gb|AAW56918.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1018
Score = 56.6 bits (135), Expect(2) = 2e-12
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DL LH+FLGIEV T GILLTQ KY +L +V M K + TP+L+S LS +G+
Sbjct: 780 DLRELHYFLGIEVTRTEDGILLTQAKYAYDVLRRVGMQDCKPVNTPLLTSEKLSVNEGD 838
Score = 40.8 bits (94), Expect(2) = 2e-12
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T L +LGF SK DT LFF+ +F+ +Y
Sbjct: 709 QAPRAWYSRLSTKLQALGFKPSKVDTSLFFYSKGDVTVFVLIY 751
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
DLG LH+FLGIEV+ G++L+Q+KY LL +V M K ++TP+ +S LS +G
Sbjct: 529 DLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEG 586
Score = 42.4 bits (98), Expect(2) = 2e-12
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T L LGF SKADT LFF+ IFL +Y
Sbjct: 458 QAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIY 500
>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
DLG LH+FLGIEV+ G++L+Q+KY LL +V M K ++TP+ +S LS +G
Sbjct: 99 DLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEG 156
Score = 42.4 bits (98), Expect(2) = 2e-12
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T L LGF SKADT LFF+ IFL +Y
Sbjct: 28 QAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIY 70
>gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 308
Score = 57.4 bits (137), Expect(2) = 3e-12
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPM 37
DLG+LH+FLGIEVN GI+LTQ+KY LL +V M G K + TP+
Sbjct: 207 DLGALHYFLGIEVNKVHDGIILTQEKYATDLLKRVGMHGCKEINTPL 253
Score = 39.7 bits (91), Expect(2) = 3e-12
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AWF +L L +LGF SKAD LFF+ IF+ +Y
Sbjct: 136 QAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIY 178
>ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|23495377|dbj|BAC19858.1|
orf490 [Oryza sativa Japonica Group]
Length = 490
Score = 58.2 bits (139), Expect(2) = 6e-12
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
DLG+LH+FLGIEVN GI+LTQ+KY LL +V M G K + TP+ ++ L +G
Sbjct: 207 DLGALHYFLGIEVNKVHDGIILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEG 264
Score = 37.7 bits (86), Expect(2) = 6e-12
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Frame = -2
Query: 388 ASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
A +AWF +L L +LGF SKAD LFF+ IF+ +Y
Sbjct: 137 APRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIY 178
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 52.8 bits (125), Expect(2) = 1e-11
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
DLG LH+ LGIEV+ G++L+Q+KY LL +V M K ++TP+ +S LS +G
Sbjct: 1053 DLGDLHYLLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEG 1110
Score = 42.4 bits (98), Expect(2) = 1e-11
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L T L LGF SKADT LFF+ IFL +Y
Sbjct: 982 QAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIY 1024
>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1180
Score = 55.1 bits (131), Expect(2) = 1e-11
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQGN 1
DLG LH+FLGIEVN + GI+LTQ+KY LL +V M K ++ + +S L+ +G+
Sbjct: 788 DLGDLHYFLGIEVNKISNGIILTQEKYANDLLKRVGMIDCKPVSASLSTSEKLTLHEGD 846
Score = 39.7 bits (91), Expect(2) = 1e-11
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW------IFLCLY 281
QA +AW+ +L L LGF SKADT LFF+ IF+ +Y
Sbjct: 717 QAPRAWYARLSQKLQQLGFQGSKADTSLFFYNKQGLTIFVLIY 759
>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
Length = 1144
Score = 57.8 bits (138), Expect(2) = 1e-11
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = -3
Query: 177 DLGSLHFFLGIEVNYTTQGILLTQKKYIEKLLAKVNMSGSKGMATPMLSSPILSKFQG 4
D+GSLH+FLG+EV TT G+ L+Q KY+ +L +M+G+K ++TP+ ++ L G
Sbjct: 903 DMGSLHYFLGVEVIPTTAGVFLSQHKYVRDILENTHMAGAKDVSTPLSTTQSLHLVDG 960
Score = 37.0 bits (84), Expect(2) = 1e-11
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -2
Query: 391 QASKAWFDKLKTVLHSLGFSASKADTYLFFW---IFLCLYHLYDXXXXXXXXHRKF 233
QA +AW+ LKT L +LGF SK D+ LF + +C + +Y +KF
Sbjct: 832 QAPRAWYSALKTALLALGFQNSKVDSSLFVYRHDSIVCYFLVYVDDLVITGNDKKF 887