BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00036101
         (931 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   223   6e-56
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   214   4e-53
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   199   2e-52
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   211   4e-52
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]   210   7e-52
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   209   8e-52
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   208   3e-51
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   204   3e-50
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]   197   3e-50
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]   191   6e-50
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   203   7e-50
gb|AAU90262.1| integrase core domain containing protein [Oryza s...   203   9e-50
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc...   202   1e-49
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     199   1e-48
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   190   1e-48
emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]   199   2e-48
emb|CAN77529.1| hypothetical protein VITISV_041425 [Vitis vinifera]   190   5e-48
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   196   1e-47
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   196   1e-47
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   196   1e-47

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  223 bits (569), Expect = 6e-56
 Identities = 114/217 (52%), Positives = 147/217 (67%), Gaps = 7/217 (3%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            +QSD GGE++   ++LT NGI+HRISCPYT EQN LAERKHRH+VE G++LLAQ++LP  
Sbjct: 629  VQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFK 688

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
            +WD AF  + +LINR PT +L+ KSP E L  QKP+Y  LK FGC+CYP LRP+N +KLQ
Sbjct: 689  YWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQ 748

Query: 441  YRSDVCTFIGYSGQHKGYKVLLPNKRVIITRHVIFDETKFPF-------HKTESSHSIHT 599
            +RS  CTF+GYS  HKGYK L PN  ++I+R VIFDE  FPF         T S  S  T
Sbjct: 749  FRSIPCTFLGYSLNHKGYKCLSPNGNILISRDVIFDEXAFPFAQLQSQKQXTSSFSSSXT 808

Query: 600  PVHNITNLPLLHVPAVVPSPSDTSSQLSNQILSSPFN 710
             +   T+LPL+ +P+   +   TSS  +  I  +  N
Sbjct: 809  SLPCQTSLPLMVLPS--STSCSTSSPTNPSIFPATSN 843


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  214 bits (545), Expect = 4e-53
 Identities = 105/211 (49%), Positives = 145/211 (68%), Gaps = 8/211 (3%)
 Frame = +3

Query: 84   QSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSFH 263
            Q+D GGEF+ L  +  +NGI+HR+SCP+T +QN + ERKHRH+VE+GL+LLAQ++LP  +
Sbjct: 442  QTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKY 501

Query: 264  WDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQY 443
            W +AF  A FLINR PT++L+ K P+E L   KPNY +LK FGCLC+P LRPYNK+KL +
Sbjct: 502  WPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDF 561

Query: 444  RSDVCTFIGYSGQHKGYKVLLPNKRVIITRHVIFDETKFPFHKTESSHSIHTPVHNITNL 623
            RS  CTF+GYS +HKGYK L    R+ I+R V+FDET+FPF        +    H+   L
Sbjct: 562  RSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVFDETRFPF-ADRLQKPVQIVSHSTVGL 620

Query: 624  PLL----HVPAVVPSPS----DTSSQLSNQI 692
            P +    ++  +  SPS     +S+Q S+Q+
Sbjct: 621  PCIPLVKNLEPJSVSPSLSLPTSSAQSSHQL 651


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  199 bits (507), Expect(2) = 2e-52
 Identities = 112/234 (47%), Positives = 147/234 (62%), Gaps = 9/234 (3%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            LQ+D GGEF+    +L ENGI+HR+SCP+T +QN +AERKHR +VE GL+LL  ++LP  
Sbjct: 646  LQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLK 705

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             WD +F    +L NR PT IL  K P E L    P+Y  LK FGC C+P LRPYN +KLQ
Sbjct: 706  FWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQ 765

Query: 441  YRSDVCTFIGYSGQHKGYKVLLPNKRVIITRHVIFDETKFPFHKT--ESSHSIHTPVHNI 614
            YRS+ CTF+GYS +HKGYK +  N RV I+  VIF+ET FP+ KT   SS  + T   + 
Sbjct: 766  YRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTVSPST 825

Query: 615  TNL-PLLHVPAVVPS--PSDTSSQLSNQILSSPFNLI---PH-PTCLVPHLTPA 755
            ++L P    P + P+  P+ TS   S + +S   N++   PH P      LTPA
Sbjct: 826  SHLSPSASPPVLSPTMLPTPTSPISSARPISEMDNIVSTHPHAPNSADTTLTPA 879



 Score = 33.9 bits (76), Expect(2) = 2e-52
 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
 Frame = +2

Query: 803  PIEIDTSHVSANAPLIDDTQVT--------NTHHMITRSKAGIYKPKI 922
            P+     HV ++   I D  VT        NTH MITR+K+GI KPKI
Sbjct: 885  PVATPVQHVVSS---IADASVTRTIAKDADNTHPMITRAKSGIVKPKI 929


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  211 bits (536), Expect = 4e-52
 Identities = 108/224 (48%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            L+SD GGEF+  + +L  +GI  + SCPYTPEQN  AERK RH++E GL+LLA ++LP  
Sbjct: 643  LRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLATASLPFK 702

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             W  AF  A FLINR PTK+L ++SPF+ L G+ PNY   K FGCLCYP +RPYNKNKL 
Sbjct: 703  FWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLS 762

Query: 441  YRSDVCTFIGYSGQHKGYKVLLP-NKRVIITRHVIFDETKFPFHKTESSHSIHTPVHNIT 617
            YRS  C F+GYS  HKGY  L P   R+ +TRHV+F ET FPF  T    S      ++ 
Sbjct: 763  YRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQSTPDQSS------SVV 816

Query: 618  NLPL-LHVPAVVPSPSDTSSQLSNQILSSPFNLIPHPTCLVPHL 746
             +P    +P   P  S   S  +    S P   +P  T  +P L
Sbjct: 817  TIPTPAFLPCSSPPVSSLRSHTTXSTSSPPLTNMPSSTISLPDL 860


>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
          Length = 1242

 Score =  210 bits (534), Expect = 7e-52
 Identities = 95/161 (59%), Positives = 122/161 (75%)
 Frame = +3

Query: 84   QSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSFH 263
            Q D GGEF+ L  +  +NGI+HR+SCP+T +QN + ERKHRH+VE+GL+LLAQ++LP  +
Sbjct: 688  QXDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKY 747

Query: 264  WDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQY 443
            W +AF    FLINR PT++L+ K P+E L   KPNY +LK FGCLC+P LRPYNK+KL +
Sbjct: 748  WPDAFSTXVFLINRLPTEVLKQKCPYEFLFNSKPNYSQLKVFGCLCFPHLRPYNKHKLDF 807

Query: 444  RSDVCTFIGYSGQHKGYKVLLPNKRVIITRHVIFDETKFPF 566
            RS  CTF+GYS +HKGYK L    R+ I+R V FDETKFPF
Sbjct: 808  RSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVXFDETKFPF 848


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  209 bits (531), Expect(2) = 8e-52
 Identities = 108/213 (50%), Positives = 141/213 (66%), Gaps = 3/213 (1%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            +QSD GGE++ L  F T+ GI H +SCP+T +QN  AERKHRH+VEVGL+LLA S++P  
Sbjct: 580  MQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLK 639

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             WD AF  A +LINRTPTK+LQF +P E L  Q P+Y  L+ FGC C+P LRPYN +KLQ
Sbjct: 640  FWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQ 699

Query: 441  YRSDVCTFIGYSGQHKGYKVLLPNK-RVIITRHVIFDETKFPFHKTESSHSIHTPVHNIT 617
            +RS  CTF+GYS  HKG+K L P+  RV I+R VIFDET FPF K      +HT      
Sbjct: 700  FRSKQCTFLGYSTLHKGFKCLDPSTGRVYISRDVIFDETNFPFAK------LHTNAGARL 753

Query: 618  NLPLLHVPAVVPSPSDT--SSQLSNQILSSPFN 710
               +L +P+ + +P+      QL + + + P N
Sbjct: 754  RSEILLLPSHLLNPTSNPGEQQLDDNMANIPVN 786



 Score = 22.7 bits (47), Expect(2) = 8e-52
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 5   KSDTLQAFVHLNNLIKTQFNKNIKYVAE*WWG 100
           KS+ +Q F     L++  FN+ I  +   W G
Sbjct: 555 KSEVIQKFHEFQALVERLFNRKIIAMQSDWGG 586


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  208 bits (529), Expect = 3e-51
 Identities = 115/233 (49%), Positives = 146/233 (62%), Gaps = 4/233 (1%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            LQSD GGEF+    FL E+GILHR SCPY   QN   ERKHRH+VE GL+LLA + LP  
Sbjct: 557  LQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLK 616

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             W  AF  A FLINR P+K+LQ  SP+ AL  + P+YK L+ FGCLCYP +RPYN +KLQ
Sbjct: 617  FWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQ 676

Query: 441  YRSDVCTFIGYSGQHKGYKVLLPN--KRVIITRHVIFDETKFPFHKTESSHSIHTPVHNI 614
            YRS  C F+GYS  HKGY + L N   RV ++ HV+FDET+FPF +  SS    +P  + 
Sbjct: 677  YRSLKCVFLGYSLHHKGY-LCLDNLTGRVYVSPHVVFDETQFPFAQNISS----SPSKDA 731

Query: 615  TNLPLLHVPAVVPSPSDTSSQLSNQILSSP--FNLIPHPTCLVPHLTPAITPT 767
            ++  ++    V  +PS  S   SN  ++SP   + + HPT       P  TPT
Sbjct: 732  SDESVIPAIIVSSNPSTLSFHGSNHSMASPNLTSALTHPT------PPTDTPT 778


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  204 bits (520), Expect = 3e-50
 Identities = 113/233 (48%), Positives = 145/233 (62%), Gaps = 4/233 (1%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            LQ D GGEF+    FL E+GILHR SCPY   QN   ERKHRH+VE GL+LLA + LP  
Sbjct: 607  LQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLPLK 666

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             W  AF  A FLINR P+K+L   SP+ AL  + P+YK L+ FGCLCYP +RPYN +KLQ
Sbjct: 667  FWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQ 726

Query: 441  YRSDVCTFIGYSGQHKGYKVLLPN--KRVIITRHVIFDETKFPFHKTESSHSIHTPVHNI 614
            YRS  C F+GYS  HKGY + L N   RV ++ HV+FDET+FPF +  SS    +P  + 
Sbjct: 727  YRSLKCVFLGYSLHHKGY-LCLDNLTGRVYVSPHVVFDETQFPFAQNISS----SPSKDA 781

Query: 615  TNLPLLHVPAVVPSPSDTSSQLSNQILSSP--FNLIPHPTCLVPHLTPAITPT 767
            ++  ++    V  +PS  S   SN  ++SP   + + HPT      +P  TPT
Sbjct: 782  SDESIIPXIIVSSNPSTLSFHGSNHSMASPNLTSTLTHPT------SPTDTPT 828


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score =  197 bits (501), Expect(2) = 3e-50
 Identities = 109/247 (44%), Positives = 147/247 (59%), Gaps = 6/247 (2%)
 Frame = +3

Query: 51   KHNLIKTSNMLQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLS 230
            ++ L  T   +QSD GGEF     +L  +GI+H+ SCP+TP+QN  A+RK RHLVE G++
Sbjct: 485  ENQLNSTIKCIQSDNGGEFIAFKPYLEAHGIVHQFSCPHTPQQNGRAKRKIRHLVETGMA 544

Query: 231  LLAQSNLPSFHWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPL 410
            LLAQS LPS +W  AF  + +LIN  PTK+L F+SP + L  + PNY  L+ FGCLC+P 
Sbjct: 545  LLAQSFLPSKYWSFAFQTSVYLINLLPTKLLNFQSPLQVLFHKIPNYHHLRVFGCLCFPS 604

Query: 411  LRPYNKNKLQYRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTESSH 587
            LRPYN +KL YRS  C F+GY+  HKGY  L +   R+ I+R V+F E+ FPF    +  
Sbjct: 605  LRPYNHHKLSYRSTACVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPFQSIPAPL 664

Query: 588  SI--HTPVHN-ITNLPLLHV--PAVVPSPSDTSSQLSNQILSSPFNLIPHPTCLVPHLTP 752
             +  HTP+ + + N P L    P  V  P  TSS        S   L+  P    P  TP
Sbjct: 665  PLPQHTPLTSALINPPFLSTSSPPTVSFPIPTSSTDCTSTSDSLPPLLQVPFSPTPSPTP 724

Query: 753  AITPTIL 773
            + +P+ L
Sbjct: 725  SSSPSPL 731



 Score = 28.9 bits (63), Expect(2) = 3e-50
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 869 NTHHMITRSKAGIYKPK 919
           NTH M+TR+K+GI+K K
Sbjct: 732 NTHPMVTRAKSGIHKKK 748


>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
          Length = 846

 Score =  191 bits (485), Expect(2) = 6e-50
 Identities = 103/219 (47%), Positives = 131/219 (59%)
 Frame = +3

Query: 96  GGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSFHWDNA 275
           GGEF+    +L ENGI+HR+SCP+T +QN +AERKHR +VE GL+LL  ++LP   WD +
Sbjct: 233 GGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDES 292

Query: 276 FLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQYRSDV 455
           F    +L NR PT +L  K P E L    P+Y  LK FGC C+P LRPYN +KLQYRS+ 
Sbjct: 293 FRTVVYLSNRLPTAVLHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEE 352

Query: 456 CTFIGYSGQHKGYKVLLPNKRVIITRHVIFDETKFPFHKTESSHSIHTPVHNITNLPLLH 635
           CTF+GYS +HKGYK +  N RV I+R VIF+ET F + KT  + S          LP   
Sbjct: 353 CTFLGYSLKHKGYKCMFSNGRVYISRDVIFNETSFSYSKTIQASSC---------LP--- 400

Query: 636 VPAVVPSPSDTSSQLSNQILSSPFNLIPHPTCLVPHLTP 752
              V PS S  S      ILS    ++P PT  +    P
Sbjct: 401 -STVSPSTSHLSPSAPPPILSP--TMLPAPTSPISSARP 436



 Score = 34.3 bits (77), Expect(2) = 6e-50
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
 Frame = +2

Query: 803 PIEIDTSHVSANAPLIDDTQVT--------NTHHMITRSKAGIYKPKILSV 931
           PI     H+ ++   I D  VT        NTH MITR K+GI KPKI  V
Sbjct: 467 PIATPVQHIVSS---IADASVTRTIAKDADNTHPMITRGKSGIVKPKIFIV 514


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  203 bits (517), Expect = 7e-50
 Identities = 105/211 (49%), Positives = 140/211 (66%), Gaps = 1/211 (0%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            +Q+D GGE+Q L  F  + GI H +SCP+T +QN  AERKHRH+VEVGL+LLA S++P  
Sbjct: 578  MQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPLK 637

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             W  AFL A +LINRTP+++L   SP E L G KP+Y  L+ FGC C+P LRPYNK+KLQ
Sbjct: 638  FWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQ 697

Query: 441  YRSDVCTFIGYSGQHKGYKVLLPNK-RVIITRHVIFDETKFPFHKTESSHSIHTPVHNIT 617
            +RS  CTF+GYS  HKG+K L P+  RV I+R V+FDET+FPF K      +H  V    
Sbjct: 698  FRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFPFTK------LHPNVGAKL 751

Query: 618  NLPLLHVPAVVPSPSDTSSQLSNQILSSPFN 710
               +  VP +  S      Q+S+ ++++P N
Sbjct: 752  RAEIALVPELAASLPRGLQQISS-VINTPEN 781


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
            Group] gi|108710062|gb|ABF97857.1| retrotransposon
            protein, putative, Ty1-copia subclass, expressed [Oryza
            sativa Japonica Group]
          Length = 1021

 Score =  203 bits (516), Expect = 9e-50
 Identities = 95/169 (56%), Positives = 121/169 (71%), Gaps = 1/169 (0%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            +QSD GGE++ L    T+ GI H +SCPY  +QN  AERKHRH+VEVGLSLLA +++P  
Sbjct: 495  MQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHASMPLK 554

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             WD AFL A +LINRTP+K++Q+ +P E L  QKPNY  L+TFGC C+P LRPYN  KLQ
Sbjct: 555  FWDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPYNNRKLQ 614

Query: 441  YRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTESS 584
            +RS  C F+GYS  HKG+K L +   RV I+R V+FDE  FPF +  S+
Sbjct: 615  FRSKQCVFLGYSNIHKGFKCLDVATGRVYISRDVVFDENIFPFSQLHSN 663


>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1016

 Score =  202 bits (515), Expect = 1e-49
 Identities = 94/169 (55%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
 Frame = +3

Query: 81  LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
           +Q+D GGE++ L  F T+ GI H +SCPY  +QN  AERKHRH+VEVGL+LLA +++P  
Sbjct: 191 MQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLAHASVPLK 250

Query: 261 HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
            WD AFL A +LINR P+K++Q+ +P E L  QKPNY  L+TFGC C+P LRPYNK KL+
Sbjct: 251 FWDEAFLAATYLINRLPSKVIQYSAPLERLLDQKPNYSALRTFGCACWPNLRPYNKRKLE 310

Query: 441 YRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTESS 584
           +RS  C F+GYS  HKG+K L +   RV I+R V+FDE  FPF K  S+
Sbjct: 311 FRSKQCVFLGYSNIHKGFKCLDVSTGRVYISRDVVFDENVFPFSKLHSN 359


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  199 bits (506), Expect = 1e-48
 Identities = 97/200 (48%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            +Q+D GGE++ L  F T+ GI H +SCP+T +QN  AERKHRH+VEVGLSLLA +++P  
Sbjct: 571  MQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASMPLK 630

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
             WD AF+ A +LINRTP+K++Q+++P E L  QKP+Y  L+ FGC C+P LRPYN  KLQ
Sbjct: 631  FWDEAFIAATYLINRTPSKVIQYETPLEHLFHQKPSYTSLRVFGCACWPNLRPYNARKLQ 690

Query: 441  YRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTESSHSIHTPVHNIT 617
            +RS  C F+GYS  HKG+K L +   RV I+R V+FDE  FPF       S+H+      
Sbjct: 691  FRSKQCVFLGYSNLHKGFKCLDVAAGRVYISRDVVFDENVFPF------ASLHSNAGARL 744

Query: 618  NLPLLHVPAVVPSPSDTSSQ 677
               +L +P  + +P D++ +
Sbjct: 745  RSEILLLPPTLLNPDDSTGR 764


>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  190 bits (482), Expect(2) = 1e-48
 Identities = 108/250 (43%), Positives = 140/250 (56%), Gaps = 22/250 (8%)
 Frame = +3

Query: 81  LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
           +Q+D GGEF+  A +LT+ GI  R  CP+   QN   ERKHRH+V++GL+LLAQ+NLP  
Sbjct: 46  VQTDWGGEFRTFASYLTQFGIQFRHPCPHIHHQNGRIERKHRHIVDIGLTLLAQANLPLK 105

Query: 261 HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
            W NAF  A FLINR PT  L   SP++ L  Q P+Y  L+ FGC C+P LRPYN++KL 
Sbjct: 106 FWWNAFHTAVFLINRLPTPTLNNISPYQKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLS 165

Query: 441 YRSDVCTFIGYSGQHKGYKVLLPNKRVIITRHVIFDETKFPFHKTESSHSIH-------- 596
           +RS+ C FIGYS  HKGY+ L  + RV ++ HVIFDE  FP+       SI         
Sbjct: 166 FRSNRCVFIGYSSSHKGYQCLHSSGRVYVSNHVIFDEQSFPYVSGSDFSSIAQSCSPLDI 225

Query: 597 --------TPVHNITNLPLLHVPAVVPSPSDT------SSQLSNQILSSPFNLIPHPTCL 734
                    P+  + + PL   PA    P+DT      SS  S+   S+      H T  
Sbjct: 226 SSESKVTLVPIPQVQS-PLQESPASDYLPADTPQVFSPSSTSSSSSTSTSHTHPIHHTQS 284

Query: 735 VPHLTPAITP 764
            PH+ PA  P
Sbjct: 285 PPHILPAAPP 294



 Score = 30.8 bits (68), Expect(2) = 1e-48
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 875 HHMITRSKAGIYKPK 919
           H MITRSKAGI+KPK
Sbjct: 297 HPMITRSKAGIFKPK 311


>emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]
          Length = 828

 Score =  199 bits (505), Expect = 2e-48
 Identities = 113/244 (46%), Positives = 149/244 (61%), Gaps = 6/244 (2%)
 Frame = +3

Query: 51   KHNLIKTSNMLQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLS 230
            ++ L  T   +QSD GGEF     +L  +GILH+ SCP+TP+QN  AERK RHLVE GL+
Sbjct: 496  ENQLHTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLA 555

Query: 231  LLAQSNLPSFHWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPL 410
            L+AQS LPS +W  AF  A +LIN  P K+L F+SP +AL  + PNY  L+ FGCLC+P 
Sbjct: 556  LMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPIQALFHKLPNYHHLRVFGCLCFPS 615

Query: 411  LRPYNKNKLQYRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTESSH 587
            LRPY ++KL YRS  C F+GY+  H GY  L +   R+ I+R+VIF E+ FPF       
Sbjct: 616  LRPYTQHKLCYRSTACVFLGYAPAHNGYLCLDVSTSRIYISRNVIFHESYFPF------Q 669

Query: 588  SIHTPVHNITNLPLLHVPAVVPSPS---DTSSQLSNQILSSPF--NLIPHPTCLVPHLTP 752
            S   P+    +LP    PA++ SPS    +S  LS+ I++S F   LIP P       TP
Sbjct: 670  SSFPPLSPPPHLP-SSTPALINSPSLSAPSSPALSSPIITSDFIPPLIPVPFATSSPATP 728

Query: 753  AITP 764
            +  P
Sbjct: 729  SPPP 732


>emb|CAN77529.1| hypothetical protein VITISV_041425 [Vitis vinifera]
          Length = 1047

 Score =  190 bits (482), Expect(2) = 5e-48
 Identities = 106/247 (42%), Positives = 145/247 (58%), Gaps = 6/247 (2%)
 Frame = +3

Query: 51   KHNLIKTSNMLQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLS 230
            ++ L  T   +QSD GGEF     +L  +GI+H+ SCP+TP+QN  A+RK  HLVE G++
Sbjct: 479  ENQLNSTIKCIQSDNGGEFIAFKPYLEAHGIVHQFSCPHTPQQNGRAKRKIHHLVETGMT 538

Query: 231  LLAQSNLPSFHWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPL 410
            LLAQS LPS +W  +F  + +LIN    K+L F+SP + L  + PNY  L+ FGCLC+P 
Sbjct: 539  LLAQSFLPSKYWSFSFQTSVYLINLLLAKLLNFQSPLQVLFHKIPNYHHLRVFGCLCFPS 598

Query: 411  LRPYNKNKLQYRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTESSH 587
            LRPYN +KL YRS  C F+GY+  HKGY  L +   R+ I+R V+F E+ FPF    +  
Sbjct: 599  LRPYNHHKLSYRSIACVFLGYASAHKGYICLDVSTSRLYISRDVLFHESSFPFQSIPAPS 658

Query: 588  SI--HTPVHN-ITNLPLLHV--PAVVPSPSDTSSQLSNQILSSPFNLIPHPTCLVPHLTP 752
             +  HTP+ + + N PLL    P  V  P  TSS        S   L+  P    P  TP
Sbjct: 659  PLPQHTPLTSALINPPLLSTSSPPTVSFPVPTSSTDYTSTSDSLPPLLQVPFAPTPSPTP 718

Query: 753  AITPTIL 773
            + +P+ L
Sbjct: 719  SSSPSPL 725



 Score = 28.9 bits (63), Expect(2) = 5e-48
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 869 NTHHMITRSKAGIYKPK 919
           NTH M+TR+K+GI+K K
Sbjct: 726 NTHPMVTRAKSGIHKKK 742


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score =  196 bits (498), Expect = 1e-47
 Identities = 104/232 (44%), Positives = 139/232 (59%), Gaps = 3/232 (1%)
 Frame = +3

Query: 81   LQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLSLLAQSNLPSF 260
            L SD GGEF  L +FL  NGI H  S P+TPE N L+ERKHRH+VE GL+LL Q+++P  
Sbjct: 590  LYSDNGGEFIALREFLVSNGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLTQASVPRE 649

Query: 261  HWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPLLRPYNKNKLQ 440
            +W  AF  A +LINR PT +L  +SPF+ L G KPNY+ L+ FGCLC+P LRPY  NKL+
Sbjct: 650  YWPYAFAAAVYLINRMPTPVLSMESPFQKLFGSKPNYERLRVFGCLCFPWLRPYTHNKLE 709

Query: 441  YRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTESSHSIHTPVHNIT 617
             RS  C F+GYS     Y    + +KR+  +RHV+FDE  FPF    S +S+ T     +
Sbjct: 710  ERSRRCVFLGYSLTQTAYLCFDVEHKRLYTSRHVVFDEASFPFSNLTSQNSLPTVTFEQS 769

Query: 618  NLPLLHVPAVVPSPSDTSSQLSNQILSSPFNLI--PHPTCLVPHLTPAITPT 767
            + PL+       +P  +SS +    LSSP  ++    P    P+   +  PT
Sbjct: 770  SSPLV-------TPILSSSSVLPSCLSSPCTVLHQQQPPVTTPNSPHSSQPT 814


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  196 bits (497), Expect = 1e-47
 Identities = 115/249 (46%), Positives = 146/249 (58%), Gaps = 12/249 (4%)
 Frame = +3

Query: 51   KHNLIKTSNMLQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLS 230
            ++ L  T   +QSD GGEF     +L  +GILH+ SCP+TP+QN  AERK RHLVE GL+
Sbjct: 593  ENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLA 652

Query: 231  LLAQSNLPSFHWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPL 410
            L+AQS LPS +W  AF  A +LIN  P K+L F+SP + L  + PNY  L+ FGCLC+P 
Sbjct: 653  LMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPS 712

Query: 411  LRPYNKNKLQYRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTE--S 581
            LRPY ++KL YRS  C F+GY+  HKGY  L +   R+ I+R+VIF E+ FPF  +   S
Sbjct: 713  LRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPS 772

Query: 582  SHSIHTPVHN--ITNLPLLHVPA--VVPSPSDTSSQLSNQI-----LSSPFNLIPHPTCL 734
            S S H P     + N P L  P+   V SP  TS      I      SSP    P P  L
Sbjct: 773  SPSPHLPSSTPALINSPSLSAPSSPAVSSPIITSDSXPPLIPVPFATSSPAAPSPPPLPL 832

Query: 735  VPHLTPAIT 761
              H  P +T
Sbjct: 833  NTH--PMVT 839


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  196 bits (497), Expect = 1e-47
 Identities = 115/249 (46%), Positives = 146/249 (58%), Gaps = 12/249 (4%)
 Frame = +3

Query: 51   KHNLIKTSNMLQSDGGGEFQGLAKFLTENGILHRISCPYTPEQNRLAERKHRHLVEVGLS 230
            ++ L  T   +QSD GGEF     +L  +GILH+ SCP+TP+QN  AERK RHLVE GL+
Sbjct: 593  ENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKIRHLVETGLA 652

Query: 231  LLAQSNLPSFHWDNAFLCACFLINRTPTKILQFKSPFEALTGQKPNYKELKTFGCLCYPL 410
            L+AQS LPS +W  AF  A +LIN  P K+L F+SP + L  + PNY  L+ FGCLC+P 
Sbjct: 653  LMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLRVFGCLCFPS 712

Query: 411  LRPYNKNKLQYRSDVCTFIGYSGQHKGYKVL-LPNKRVIITRHVIFDETKFPFHKTE--S 581
            LRPY ++KL YRS  C F+GY+  HKGY  L +   R+ I+R+VIF E+ FPF  +   S
Sbjct: 713  LRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQSSSPPS 772

Query: 582  SHSIHTPVHN--ITNLPLLHVPA--VVPSPSDTSSQLSNQI-----LSSPFNLIPHPTCL 734
            S S H P     + N P L  P+   V SP  TS      I      SSP    P P  L
Sbjct: 773  SPSPHLPSSTPALINSPSLSAPSSPAVSSPIITSDSXPPLIPVPFATSSPAAPSPPPLPL 832

Query: 735  VPHLTPAIT 761
              H  P +T
Sbjct: 833  NTH--PMVT 839