BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00036013
         (584 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   142   6e-32
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   142   6e-32
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...   139   4e-31
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   133   4e-29
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   131   1e-28
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   131   1e-28
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660...   130   3e-28
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]   128   9e-28
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]   128   1e-27
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...   125   6e-27
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   125   8e-27
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]   121   1e-25
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]   120   3e-25
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]   120   3e-25
gb|AAB82754.1| retrofit [Oryza longistaminata]                        119   4e-25
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   119   6e-25
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc...   118   1e-24
emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera]   118   1e-24
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   117   2e-24
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  117   2e-24

>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  142 bits (358), Expect = 6e-32
 Identities = 84/193 (43%), Positives = 114/193 (59%), Gaps = 16/193 (8%)
 Frame = -2

Query: 538 GFRARGGR------------NSGNRICCQICGYNNHTADRCYHRFNSEYA--QN--SQSQ 407
           GFR RG +            N   +  CQ+CG   H   +CY+RF+  +   QN  S++ 
Sbjct: 283 GFRGRGNKGSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNS 342

Query: 406 SPRNNVENNRNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKL 227
           SPR     +   PQ N +  T S+  S+ NW+PDSGAS+H+T +  NL   +++ G N++
Sbjct: 343 SPRAYYSFS---PQVNGVIPT-SEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQV 398

Query: 226 QIGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFE 47
            +GNGTGL I HIG++   S   S  L    LN+LLHVP ITKNLLSV++FA+DN VFFE
Sbjct: 399 HVGNGTGLSIKHIGQSEFLSPFSSKPL---LLNHLLHVPSITKNLLSVSKFAKDNKVFFE 455

Query: 46  FYPFYCLVKDQAT 8
           F+   C VKDQ T
Sbjct: 456 FHSDSCFVKDQVT 468


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  142 bits (358), Expect = 6e-32
 Identities = 79/187 (42%), Positives = 110/187 (58%), Gaps = 9/187 (4%)
 Frame = -2

Query: 541 RGFRARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQS--PRNNVENNRN-- 374
           RG   RG     N+  CQ+CG   H   +CY+RF+  +   SQ Q   P+ N+ +     
Sbjct: 270 RGRHGRGSWKGNNKPQCQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRPQGNMAHLHQQL 329

Query: 373 ----FPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTG 206
               FP + ++  T ++   + NW+PDSGA+HH+T +L+NL   S +  ++++ +GNG G
Sbjct: 330 SEXFFPGTPSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKG 389

Query: 205 LDITHIGKT-LVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYC 29
           L I HIG T    S  PS  L    L  LLHVP+ITKNLLSV++FA DN VFFEF+P  C
Sbjct: 390 LPIHHIGHTSFSSSFIPSKTL---ALKQLLHVPEITKNLLSVSKFAADNHVFFEFHPTSC 446

Query: 28  LVKDQAT 8
            VKD +T
Sbjct: 447 FVKDPST 453


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
           lycopersicum]
          Length = 544

 Score =  139 bits (351), Expect = 4e-31
 Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 2/172 (1%)
 Frame = -2

Query: 526 RGGRNSGNRICCQICGYNNHTADRCYHRFNSE-YAQNSQSQSPRNNVENNRNFPQSNAMF 350
           R    S  RI CQIC   NH A  CY+R N + Y     S  P+ N+      P +N+M 
Sbjct: 278 RSSNRSSPRIICQICEKPNHHARNCYNRNNMDTYPPTRSSNRPQANMVT----PSTNSMM 333

Query: 349 ATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGKTLVF 170
           + ++    + +WF DSGA++H+T+DLS LSI  DYNG ++L +GNG  L I HIG + + 
Sbjct: 334 SPSA--IIDNSWFADSGATNHVTSDLSQLSIHMDYNGEDQLALGNGQKLSINHIGSSKLS 391

Query: 169 SLT-PSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVKD 17
             T P H      LN +LHVP ITK+LLSV+QF +DN VF EF+P  C VKD
Sbjct: 392 CATRPLH------LNKILHVPSITKSLLSVSQFTKDNNVFMEFHPSCCFVKD 437


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  133 bits (334), Expect = 4e-29
 Identities = 81/197 (41%), Positives = 108/197 (54%), Gaps = 7/197 (3%)
 Frame = -2

Query: 577 NNEGSTPTVNLARGFRARGGRNSG------NRICCQICGYNNHTADRCYHRFNSEY-AQN 419
           NN+ S+   N   GF  R G N G      +R  CQ+CG   HT  RCYHRF+  +   N
Sbjct: 288 NNKRSSGQ-NRQSGFNTRRGTNGGRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQGYN 346

Query: 418 SQSQSPRNNVENNRNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNG 239
               + + N  N +N  Q  AM A+ S  + E  WF D+GA+HH++  +  LS V  Y G
Sbjct: 347 PNMDTVQTNKPNAKN--QVQAMMASPSTISDEA-WFFDTGATHHLSQSIDPLSDVQPYMG 403

Query: 238 NNKLQIGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNG 59
           N+K+ +GNG  L I H G T   S + +     F+L  +LHVP I  NL+SV+QF  DN 
Sbjct: 404 NDKVIVGNGKHLRILHTGTTFFPSSSKT-----FQLRQVLHVPDIATNLISVSQFCADNN 458

Query: 58  VFFEFYPFYCLVKDQAT 8
            FFEF+P +  VKDQ T
Sbjct: 459 TFFEFHPRFFFVKDQVT 475


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  131 bits (330), Expect = 1e-28
 Identities = 75/184 (40%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
 Frame = -2

Query: 532 RARGGRNS---------GNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENN 380
           R RGGRN            +  CQ+CG   HTA  CYHRF+  +     + S   N  N 
Sbjct: 267 RGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQ 326

Query: 379 RNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLD 200
            N P   AM A+AS   ++ +W+ DSGASHH+T +L NL+  S Y G +K+ IGNG  L 
Sbjct: 327 NNIP---AMVASASNNPADESWYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLS 383

Query: 199 ITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVK 20
           I++IG   + S T     HSF+L  + HVP I+ NL+SVA+F  +N    EF+     VK
Sbjct: 384 ISNIGSKQLHSHT-----HSFRLKKVFHVPFISANLISVAKFCSENNALIEFHSNAFFVK 438

Query: 19  DQAT 8
           D  T
Sbjct: 439 DLHT 442


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  131 bits (329), Expect = 1e-28
 Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 26/191 (13%)
 Frame = -2

Query: 532 RARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNV------------ 389
           R RG    G +  CQ+C    HT  RC++R++  +  N  +  P   V            
Sbjct: 170 RGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGS 229

Query: 388 --------------ENNRNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVS 251
                         + N+++ +  AM AT  +      WFPDSGA++H+T+DL NL+  +
Sbjct: 230 ISSAGNVNLTEYDAQENQDYSEMEAMVATP-EDLQNCCWFPDSGATNHVTHDLGNLNSGA 288

Query: 250 DYNGNNKLQIGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFA 71
           +YNGN+K+ +GNGTGL I+HIG ++  S +  +K+    L N+L VP I KN LSV+QF 
Sbjct: 289 EYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKV--LFLKNILRVPAIKKNXLSVSQFX 346

Query: 70  RDNGVFFEFYP 38
           RDN V+FEF+P
Sbjct: 347 RDNNVYFEFHP 357


>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
          Length = 868

 Score =  130 bits (326), Expect = 3e-28
 Identities = 80/198 (40%), Positives = 107/198 (54%), Gaps = 15/198 (7%)
 Frame = -2

Query: 550 NLARGFRARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQ------------ 407
           N   G   RGG   G +  CQIC  + H A  CY+R+++  A   Q Q            
Sbjct: 267 NRGGGRFGRGGGRFG-KTQCQICHKSGHDASICYYRYSNSVAAMYQPQRAPFNPFLMPSR 325

Query: 406 ---SPRNNVENNRNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGN 236
               P  +    R  PQ    +A      S   W+PDSGASHH+T D SN+S  +   G 
Sbjct: 326 PMYQPPFSYAAPRGAPQPQVFYAGTDAGFSNQWWYPDSGASHHVTPDPSNVSDSTSVPGT 385

Query: 235 NKLQIGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGV 56
            ++ +GNG GL I  IG ++ F L P++   S  L NLL VP ITKNL+SV++FA+DN V
Sbjct: 386 EQVFMGNGQGLSIHSIG-SMPFPL-PNYPHMSLTLQNLLLVPHITKNLMSVSKFAQDNKV 443

Query: 55  FFEFYPFYCLVKDQATGE 2
           FFEF+P +C+VK QA+ E
Sbjct: 444 FFEFHPKFCVVKSQASSE 461


>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
          Length = 1139

 Score =  128 bits (322), Expect = 9e-28
 Identities = 73/184 (39%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
 Frame = -2

Query: 532 RARGGRNS---------GNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENN 380
           R RGGRN            +  CQ+CG   HTA  CYHRF+  +     + S   N  N 
Sbjct: 238 RGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTTSHSLNNGNQ 297

Query: 379 RNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLD 200
            N P    M A+AS   ++ +W+ DSG SHH+T +L NL+  S Y G +++ IGNG  L 
Sbjct: 298 NNIP---TMVASASNSPADESWYLDSGTSHHLTQNLGNLTSTSLYTGTDRVTIGNGKHLS 354

Query: 199 ITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVK 20
           I++IG   + S T     HSF+L  + HVP I+ NL+SVA+F  DN    EF+     VK
Sbjct: 355 ISNIGSKQLHSHT-----HSFQLKKVFHVPFISANLISVAKFYSDNNALIEFHSNAFFVK 409

Query: 19  DQAT 8
           D+ T
Sbjct: 410 DRHT 413


>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
          Length = 955

 Score =  128 bits (321), Expect = 1e-27
 Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 26/191 (13%)
 Frame = -2

Query: 532 RARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNV------------ 389
           R RG    G +  CQ+C    HT  RC++R++  +  N  +  P   V            
Sbjct: 172 RGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMXANGPTPGVLGSGARNGAXGS 231

Query: 388 --------------ENNRNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVS 251
                         + ++++ +  AM AT  +      WFPDS A++H+T+DL NL+  +
Sbjct: 232 ISSAGNVNLTEYDAQEDQDYSEMEAMVATX-EDLQNCCWFPDSRATNHVTHDLGNLNSGA 290

Query: 250 DYNGNNKLQIGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFA 71
           +YNGN+K+ +GN TGL I+HIG ++  S +  +K+  F L N+L VP I KNLLSV QFA
Sbjct: 291 EYNGNSKIHMGNETGLKISHIGLSVFPSSSSPNKV--FFLKNILRVPAIKKNLLSVFQFA 348

Query: 70  RDNGVFFEFYP 38
           RDN V+FEF+P
Sbjct: 349 RDNNVYFEFHP 359


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score =  125 bits (315), Expect = 6e-27
 Identities = 68/177 (38%), Positives = 102/177 (57%)
 Frame = -2

Query: 538 GFRARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENNRNFPQSN 359
           G   +G  N G+R  CQIC    H A  C+HRF++++   +   S  N   ++   PQ+ 
Sbjct: 299 GHSNKGRANPGSRPQCQICCKIGHVATECWHRFDNQFQPKA---SHSNQFSSSAQDPQA- 354

Query: 358 AMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGKT 179
                A     E  WF D+GA+HH+T+DL+NLS+ + ++G++K+ +GNG GL + H G +
Sbjct: 355 --LMAAPGLLGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHS 412

Query: 178 LVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVKDQAT 8
            +    P+ +  +  L N+LHVPKI  NL+SV +   DN  + EFYP Y  VKDQ T
Sbjct: 413 SI----PTSQ-GALLLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKT 464


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  125 bits (314), Expect = 8e-27
 Identities = 75/186 (40%), Positives = 102/186 (54%), Gaps = 11/186 (5%)
 Frame = -2

Query: 532 RARGGR---------NSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENN 380
           R RGGR         +S  R  CQ+CG   HT   CYHRF+  +      QS +NN    
Sbjct: 265 RGRGGRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDITF------QSTQNNTTGV 318

Query: 379 RNFPQSNAMFA--TASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTG 206
            N   SN+M A   +S   ++ NW+ DSGASHH+T +++NL+  + Y G +K+ IGNG  
Sbjct: 319 SNSGNSNSMPAMVASSNNLADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGKH 378

Query: 205 LDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCL 26
           L I++ G T +FS       HSF+L  + HVP I+ NL+SVA+F  DN    EF+     
Sbjct: 379 LTISNTGFTRLFS-----NPHSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGFF 433

Query: 25  VKDQAT 8
           VKD  T
Sbjct: 434 VKDLHT 439


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score =  121 bits (304), Expect = 1e-25
 Identities = 78/217 (35%), Positives = 107/217 (49%), Gaps = 36/217 (16%)
 Frame = -2

Query: 544 ARGFRARGGRN-SGNRICCQICGYNNHTADRCYHRFN-----SEYAQNSQSQS------- 404
           ++ FR R   N   +RI CQ+CG   HTA +C+HRF+       +AQN Q  S       
Sbjct: 152 SKNFRPRNVCNPQTSRIVCQLCGKMGHTAMKCFHRFDVYFQSPPHAQNQQFSSLHQPQQP 211

Query: 403 -------------------PRNNVENNRNFPQSNAMFATASKQASEMN----WFPDSGAS 293
                              P   ++N+     S      A   A ++N    WF DSGA+
Sbjct: 212 QLRPPPLHQPQYYSIGPLVPSRPIQNSHQQLDSTNTSPHAYIVAPDLNSNTSWFVDSGAT 271

Query: 292 HHITNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHV 113
           HH+T D + L +   Y+G   + +GNG  LDI+ +G T   S   S  LH   L N+LHV
Sbjct: 272 HHMTTDSNTLDVFDHYSGTGNVVVGNGQTLDISSVGHTSFPSRKSSKSLH---LANVLHV 328

Query: 112 PKITKNLLSVAQFARDNGVFFEFYPFYCLVKDQATGE 2
           P+ITKNL+SVA+F +DN V  EF    C VKD+ + E
Sbjct: 329 PQITKNLISVAKFTQDNDVILEFDSHCCFVKDKKSRE 365


>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
          Length = 515

 Score =  120 bits (301), Expect = 3e-25
 Identities = 65/165 (39%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
 Frame = -2

Query: 493 CQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENNRNFPQSNAMFATASKQAS---E 323
           CQ+CG   HT  +CYHRF+  Y             + N + P + A F+ +   A+   +
Sbjct: 269 CQLCGKFGHTVIKCYHRFDINY-------------QGNNSVPPAQASFSHSMLAAAPNHQ 315

Query: 322 MNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGKTLVFSLTPSHKLH 143
            +WF D+GA+HH+++ +  LS V  Y+G N++ IG+G  L I H G    F   PS    
Sbjct: 316 DSWFFDTGATHHLSHSVQTLSCVQPYSGTNQVTIGDGNSLPILHTGTKSFFF--PSK--- 370

Query: 142 SFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVKDQAT 8
           +F LN +LHVP ++ NL+SV++F  DN VFFEF+  Y  VKDQ T
Sbjct: 371 TFSLNQVLHVPHLSTNLISVSKFCMDNAVFFEFHFSYFFVKDQVT 415


>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
          Length = 1319

 Score =  120 bits (301), Expect = 3e-25
 Identities = 76/202 (37%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
 Frame = -2

Query: 571 EGSTPTV-NLARGFRARGGR---------NSGNRICCQICGYNNHTADRCYHRFNSEYAQ 422
           +  TP + N     R RGGR         NS  +  CQ+CG   HT   CYHRF+  Y  
Sbjct: 231 QNHTPNISNYTYRGRGRGGRYGQNGRHNSNSSEKPQCQLCGKFGHTVQICYHRFDISYQS 290

Query: 421 NSQSQSPRNNVENNRNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYN 242
           +  S +  +N  N  + P   AM A+++  A +  W+ DSGASHH+T  + NL+  S Y 
Sbjct: 291 SXSSNTSPSNAGNPNSIP---AMVASSNNLADD-TWYLDSGASHHLTQSVXNLTSSSPYT 346

Query: 241 GNNKLQIGNGTGLDITHIGKTLVFSLTPSHKL----HSFKLNNLLHVPKITKNLLSVAQF 74
           G +K+ IGNG  L I++ G         SH+L     SF L  + HVP I+ NL+SVA+F
Sbjct: 347 GTDKVTIGNGKHLSISNTG---------SHRLLXDSRSFHLKKVFHVPFISANLISVAKF 397

Query: 73  ARDNGVFFEFYPFYCLVKDQAT 8
             DN    EF      VKD  T
Sbjct: 398 CSDNNALIEFXSNSFFVKDLHT 419


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  119 bits (299), Expect = 4e-25
 Identities = 63/178 (35%), Positives = 93/178 (52%)
 Frame = -2

Query: 541 RGFRARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENNRNFPQS 362
           RG R RG      R  CQ+C    HTA  C++RF+ +Y  + +                 
Sbjct: 264 RGGRGRGTGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVADEK----------------- 306

Query: 361 NAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGK 182
             + A  +    + NW+ D+GA+ HIT +L  L+    YNG  ++   +G G+DI+HIG 
Sbjct: 307 -LVAAATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGH 365

Query: 181 TLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVKDQAT 8
           T+V   TPS  +H   LNN+L+VP+  KNL+S +Q A DN  F E +  +  +KDQ T
Sbjct: 366 TIVH--TPSRNIH---LNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVT 418


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  119 bits (298), Expect = 6e-25
 Identities = 80/212 (37%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
 Frame = -2

Query: 577 NNEGSTPTVNLARG---------FRARG--------GR---NSGNRICCQICGYNNHTAD 458
           NN G     N  RG         FR RG        GR   +S  R  CQ+CG   HT  
Sbjct: 239 NNRGGGRKYNGGRGPNFMMTNSNFRGRGRGXRYGQSGRQNSSSSERPQCQLCGKFGHTVQ 298

Query: 457 RCYHRFNSEYAQNSQSQSPRNNVENNRNFPQSNAMFATA--SKQASEMNWFPDSGASHHI 284
            CYHRF+  +      QS +NN     N   SN M A    S   ++ NW+ DSGASHH+
Sbjct: 299 VCYHRFDITF------QSTQNNTTGVSNSGNSNXMPAMVAXSNNXADDNWYLDSGASHHL 352

Query: 283 TNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKI 104
           T +++NL+  + Y G +K+ IGNG  L I++   T +FS       HSF+L  + HVP I
Sbjct: 353 TQNVANLTNATPYTGADKVTIGNGKHLTISNTXFTRLFS-----NPHSFQLKKVFHVPFI 407

Query: 103 TKNLLSVAQFARDNGVFFEFYPFYCLVKDQAT 8
           + NL+SVA+F  DN    EF+     +KD  T
Sbjct: 408 SANLISVAKFCSDNNALIEFHSNGFFLKDLHT 439


>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 807

 Score =  118 bits (296), Expect = 1e-24
 Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
 Frame = -2

Query: 532 RARG---GRNSGN------RICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENN 380
           R RG    RN GN      R  CQ+C    H A +C+HRF+  Y  + +           
Sbjct: 226 RGRGYTPARNRGNQQRVDPRPICQVCYKRGHVAAKCWHRFDENYVPDER----------- 274

Query: 379 RNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLD 200
                 +   A  +  A + NW+ DSGA+ HIT++L  L++   Y G  K+   NG G+ 
Sbjct: 275 ------HVAAAAQAAYAVDTNWYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVGMQ 328

Query: 199 ITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVK 20
           I HIG  LV   TP +  H+  L N+LHVP  TKNL+S ++ A DN VF E +  Y LVK
Sbjct: 329 IKHIGHALVH--TPDN--HTLHLKNVLHVPHATKNLISASRLAEDNYVFLEIHSKYFLVK 384

Query: 19  DQA 11
           D+A
Sbjct: 385 DRA 387


>emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera]
          Length = 411

 Score =  118 bits (296), Expect = 1e-24
 Identities = 74/192 (38%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
 Frame = -2

Query: 550 NLARGFRARG-GRNSGNRICCQ---ICGYNNHTADRCYHRFNSEYAQN-------SQSQS 404
           N  RG  ++G G  S N+       +C    H+A+RCY+R++  +          S  +S
Sbjct: 157 NFGRGNFSQGRGFTSNNQFSPNFGXVCMKIGHSANRCYYRYDPSFQSPRTLGFTPSFQKS 216

Query: 403 PRNNVENNRNFPQSNAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQ 224
           P+   +   N P    +  T  +   + NW+PDS AS+H+T + +NL   + Y GN +++
Sbjct: 217 PQTQXQGG-NKPNMQVLX-TIPENICDTNWYPDSSASNHVTTNANNLVEHTPYYGNEQVR 274

Query: 223 IGNGTGLDITHIGKTLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEF 44
           +GNG G+ I +IG +  FS   + +L  F LN LLHV  ITKNLLSV++F RDN VFFEF
Sbjct: 275 VGNGMGIFIKYIGLSQ-FSXPFTSQL--FSLNXLLHVLXITKNLLSVSKFXRDNNVFFEF 331

Query: 43  YPFYCLVKDQAT 8
           +P +CLVK Q +
Sbjct: 332 HPNFCLVKYQVS 343


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score =  117 bits (294), Expect = 2e-24
 Identities = 62/178 (34%), Positives = 92/178 (51%)
 Frame = -2

Query: 541 RGFRARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENNRNFPQS 362
           RG   RG      R  CQ+C    HTA  C++RF+ +Y  + +                 
Sbjct: 268 RGGHGRGTGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVADEK----------------- 310

Query: 361 NAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGK 182
             + A  +    + NW+ D+GA+ HIT +L  L+    YNG  ++   +G G+DI+HIG 
Sbjct: 311 -LVAAATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGH 369

Query: 181 TLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVKDQAT 8
           T+V   TPS  +H   LNN+L+VP+  KNL+S +Q A DN  F E +  +  +KDQ T
Sbjct: 370 TIVH--TPSRNIH---LNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVT 422


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  117 bits (294), Expect = 2e-24
 Identities = 62/178 (34%), Positives = 92/178 (51%)
 Frame = -2

Query: 541 RGFRARGGRNSGNRICCQICGYNNHTADRCYHRFNSEYAQNSQSQSPRNNVENNRNFPQS 362
           RG   RG      R  CQ+C    HTA  C++RF+ +Y  + +                 
Sbjct: 268 RGGHGRGTGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVADEK----------------- 310

Query: 361 NAMFATASKQASEMNWFPDSGASHHITNDLSNLSIVSDYNGNNKLQIGNGTGLDITHIGK 182
             + A  +    + NW+ D+GA+ HIT +L  L+    YNG  ++   +G G+DI+HIG 
Sbjct: 311 -LVAAATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGH 369

Query: 181 TLVFSLTPSHKLHSFKLNNLLHVPKITKNLLSVAQFARDNGVFFEFYPFYCLVKDQAT 8
           T+V   TPS  +H   LNN+L+VP+  KNL+S +Q A DN  F E +  +  +KDQ T
Sbjct: 370 TIVH--TPSRNIH---LNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVT 422