BLASTX nr result
ID: Rehmannia22_contig00035735
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00035735
(414 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in... 214 4e-64
ref|YP_007353905.1| RNA polymerase beta'' subunit (chloroplast) ... 210 7e-63
ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) ... 210 7e-63
gb|ADD31149.1| RNA polymerase beta'' subunit protein [Antirrhinu... 210 7e-63
ref|YP_004940500.1| rpoC2 gene product (chloroplast) [Boea hygro... 211 9e-63
gb|AHH30431.1| RNA polymerase beta'' subunit (chloroplast) [Bart... 210 2e-62
ref|YP_008964857.1| RNA polymerase beta'' subunit (chloroplast) ... 207 1e-61
gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Orig... 207 2e-61
ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ... 206 3e-61
ref|YP_008081255.1| RNA polymerase beta' subunit (chloroplast) [... 203 8e-61
gb|ADD31152.1| RNA polymerase beta'' subunit protein [Ehretia ac... 202 2e-60
ref|YP_817472.1| RNA polymerase beta' subunit [Coffea arabica] g... 203 3e-60
ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea s... 201 4e-60
ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana s... 201 4e-60
emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp... 201 4e-60
ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea s... 201 4e-60
gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea] gi|3... 201 4e-60
ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast)... 201 4e-60
gb|AHE41665.1| RNA polymerase beta' subunit, partial (chloroplas... 201 4e-60
sp|Q33C48.1|RPOC2_NICTO RecName: Full=DNA-directed RNA polymeras... 200 7e-60
>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
(chloroplast) [Sesamum indicum]
gi|496538591|gb|AGL45326.1| RpoC2 (chloroplast) [Sesamum
indicum]
Length = 1390
Score = 214 bits (546), Expect(2) = 4e-64
Identities = 108/111 (97%), Positives = 109/111 (98%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1245 FSPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 1304
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGR+DWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNK PLETKKNNLFEG
Sbjct: 1305 RGRVDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKGPLETKKNNLFEG 1355
Score = 56.2 bits (134), Expect(2) = 4e-64
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1219 HNRHIEIIVRQITSKVLVSEDGMSNVF 1245
>ref|YP_007353905.1| RNA polymerase beta'' subunit (chloroplast) [Tectona grandis]
gi|438687594|emb|CCP47120.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
gi|438688278|emb|CCP47209.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
gi|438688402|emb|CCP47298.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
Length = 1395
Score = 210 bits (535), Expect(2) = 7e-63
Identities = 109/113 (96%), Positives = 110/113 (97%), Gaps = 2/113 (1%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1248 FSPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 1307
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPL--ETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHN+SPL ETKKNNLFEG
Sbjct: 1308 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNRSPLEMETKKNNLFEG 1360
Score = 56.2 bits (134), Expect(2) = 7e-63
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1222 HNRHIEIIVRQITSKVLVSEDGMSNVF 1248
>ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) [Lindenbergia
philippensis] gi|557136853|emb|CDI43908.1| RNA polymerase
beta'' subunit (chloroplast) [Lindenbergia philippensis]
Length = 1368
Score = 210 bits (535), Expect(2) = 7e-63
Identities = 108/111 (97%), Positives = 108/111 (97%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAER GRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1237 FSPGELIGLLRAERTGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 1296
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKGLV PSKQHNKSPLETKKNNLFEG
Sbjct: 1297 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVLPSKQHNKSPLETKKNNLFEG 1347
Score = 56.2 bits (134), Expect(2) = 7e-63
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1211 HNRHIEIIVRQITSKVLVSEDGMSNVF 1237
>gb|ADD31149.1| RNA polymerase beta'' subunit protein [Antirrhinum majus]
Length = 1361
Score = 210 bits (535), Expect(2) = 7e-63
Identities = 106/111 (95%), Positives = 108/111 (97%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGIT+ASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1231 FSPGELIGLLRAERMGRALEEAVCYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL 1290
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKG VPPSKQHNKSPLE KKNNLFEG
Sbjct: 1291 RGRIDWLKGLKENVVLGGMIPVGTGLKGFVPPSKQHNKSPLEPKKNNLFEG 1341
Score = 56.2 bits (134), Expect(2) = 7e-63
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1205 HNRHIEIIVRQITSKVLVSEDGMSNVF 1231
>ref|YP_004940500.1| rpoC2 gene product (chloroplast) [Boea hygrometrica]
gi|340549397|gb|AEK53219.1| RNA polymerase beta'' subunit
(chloroplast) [Boea hygrometrica]
Length = 1381
Score = 211 bits (537), Expect(2) = 9e-63
Identities = 106/111 (95%), Positives = 109/111 (98%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1236 FSPGELIGLLRAERMGRALEEAVCYRAILLGITRASLNTQSFISEASFQETARVLAKAAL 1295
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKG VPPSKQHNKSPL+TKK+NLFEG
Sbjct: 1296 RGRIDWLKGLKENVVLGGMIPVGTGLKGFVPPSKQHNKSPLQTKKDNLFEG 1346
Score = 55.1 bits (131), Expect(2) = 9e-63
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDG+SNVF
Sbjct: 1210 HNRHIEIIVRQITSKVLVSEDGLSNVF 1236
>gb|AHH30431.1| RNA polymerase beta'' subunit (chloroplast) [Bartsia inaequalis]
Length = 1384
Score = 210 bits (535), Expect(2) = 2e-62
Identities = 107/111 (96%), Positives = 109/111 (98%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1239 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 1298
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKGLV PS++HNKSPLETK NNLFEG
Sbjct: 1299 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVLPSQEHNKSPLETKNNNLFEG 1349
Score = 54.7 bits (130), Expect(2) = 2e-62
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSE+GMSNVF
Sbjct: 1213 HNRHIEIIVRQITSKVLVSEEGMSNVF 1239
>ref|YP_008964857.1| RNA polymerase beta'' subunit (chloroplast) [Schwalbea americana]
gi|560176690|emb|CDJ38609.1| RNA polymerase beta''
subunit (chloroplast) [Schwalbea americana]
Length = 1382
Score = 207 bits (527), Expect(2) = 1e-61
Identities = 106/111 (95%), Positives = 107/111 (96%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1238 FSPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 1297
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKGL+ PSKQH KSPLETKKNNLF G
Sbjct: 1298 RGRIDWLKGLKENVVLGGMIPVGTGLKGLILPSKQHTKSPLETKKNNLFGG 1348
Score = 55.1 bits (131), Expect(2) = 1e-61
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITS+VLVSEDGMSNVF
Sbjct: 1212 HNRHIEIIVRQITSRVLVSEDGMSNVF 1238
>gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 1397
Score = 207 bits (527), Expect(2) = 2e-61
Identities = 108/113 (95%), Positives = 109/113 (96%), Gaps = 2/113 (1%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1250 FSPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 1309
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPL--ETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKGLVP SKQHN+SPL ETKKNNLFEG
Sbjct: 1310 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPSSKQHNRSPLEMETKKNNLFEG 1362
Score = 54.7 bits (130), Expect(2) = 2e-61
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSE+GMSNVF
Sbjct: 1224 HNRHIEIIVRQITSKVLVSEEGMSNVF 1250
>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|401879732|gb|AFQ30919.1| RNA polymerase beta subunit-2
(chloroplast) [Salvia miltiorrhiza]
gi|573461941|emb|CCQ71610.1| RNA polymerase beta''
subunit (chloroplast) [Salvia miltiorrhiza]
Length = 1395
Score = 206 bits (525), Expect(2) = 3e-61
Identities = 108/113 (95%), Positives = 109/113 (96%), Gaps = 2/113 (1%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1248 FSPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 1307
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPL--ETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTGLKGLVP SKQHN+SPL ETKKNNLFEG
Sbjct: 1308 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPYSKQHNRSPLEMETKKNNLFEG 1360
Score = 54.7 bits (130), Expect(2) = 3e-61
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSE+GMSNVF
Sbjct: 1222 HNRHIEIIVRQITSKVLVSEEGMSNVF 1248
>ref|YP_008081255.1| RNA polymerase beta' subunit (chloroplast) [Catharanthus roseus]
gi|474452066|gb|AGI51134.1| RNA polymerase beta' subunit
(chloroplast) [Catharanthus roseus]
Length = 1376
Score = 203 bits (517), Expect(2) = 8e-61
Identities = 102/110 (92%), Positives = 106/110 (96%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
FLPGE+IGLLRAERMGRALEEA+CYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1239 FLPGEIIGLLRAERMGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAAL 1298
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFE 5
RGRIDWLKGLKENVVLGGMIPVGTG KGLV PSKQHNK PLE+KK NLFE
Sbjct: 1299 RGRIDWLKGLKENVVLGGMIPVGTGFKGLVHPSKQHNKIPLESKKKNLFE 1348
Score = 56.2 bits (134), Expect(2) = 8e-61
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1213 HNRHIEIIVRQITSKVLVSEDGMSNVF 1239
>gb|ADD31152.1| RNA polymerase beta'' subunit protein [Ehretia acuminata]
Length = 1381
Score = 202 bits (513), Expect(2) = 2e-60
Identities = 103/111 (92%), Positives = 105/111 (94%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEA+CYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1245 FSPGELIGLLRAERMGRALEEAICYRAILLGITRASLNTQSFISEASFQETARVLAKAAL 1304
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTG KGLV SKQHNK PLETKK NLFEG
Sbjct: 1305 RGRIDWLKGLKENVVLGGMIPVGTGFKGLVHLSKQHNKIPLETKKKNLFEG 1355
Score = 56.2 bits (134), Expect(2) = 2e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1219 HNRHIEIIVRQITSKVLVSEDGMSNVF 1245
>ref|YP_817472.1| RNA polymerase beta' subunit [Coffea arabica]
gi|122153611|sp|A0A325.1|RPOC2_COFAR RecName:
Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|116242154|gb|ABJ89669.1| RNA polymerase beta' subunit
[Coffea arabica]
Length = 1391
Score = 203 bits (516), Expect(2) = 3e-60
Identities = 103/111 (92%), Positives = 106/111 (95%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEA+CYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1246 FSPGELIGLLRAERMGRALEEAICYRAVLLGITRASLNTQSFISEASFQETARVLAKAAL 1305
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTG KGLV PSKQHNK+ LETKK NLFEG
Sbjct: 1306 RGRIDWLKGLKENVVLGGMIPVGTGFKGLVKPSKQHNKALLETKKKNLFEG 1356
Score = 54.7 bits (130), Expect(2) = 3e-60
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HN+HIEIIVRQITSKVL+SEDGMSNVF
Sbjct: 1220 HNKHIEIIVRQITSKVLISEDGMSNVF 1246
>ref|YP_004563771.1| RNA polymerase beta'' chain [Olea europaea subsp. cuspidata]
gi|334084940|emb|CBJ04288.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 201 bits (511), Expect(2) = 4e-60
Identities = 103/111 (92%), Positives = 105/111 (94%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1249 FSPGELIGLLRAERMGRALEEAVCYRAVLLGITRASLNTQSFISEASFQETARVLAKAAL 1308
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIP+GTG KGLVPPSKQ N S LETKK NLFEG
Sbjct: 1309 RGRIDWLKGLKENVVLGGMIPLGTGFKGLVPPSKQDNNSLLETKKKNLFEG 1359
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1223 HNRHIEIIVRQITSKVLVSEDGMSNVF 1249
>ref|YP_004563994.1| RNA polymerase beta'' chain [Olea woodiana subsp. woodiana]
gi|334084649|emb|CBS29340.1| RNA polymerase beta'' chain
[Olea woodiana subsp. woodiana]
Length = 1394
Score = 201 bits (511), Expect(2) = 4e-60
Identities = 103/111 (92%), Positives = 105/111 (94%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1249 FSPGELIGLLRAERMGRALEEAVCYRAVLLGITRASLNTQSFISEASFQETARVLAKAAL 1308
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIP+GTG KGLVPPSKQ N S LETKK NLFEG
Sbjct: 1309 RGRIDWLKGLKENVVLGGMIPLGTGFKGLVPPSKQDNNSLLETKKKNLFEG 1359
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1223 HNRHIEIIVRQITSKVLVSEDGMSNVF 1249
>emb|CBR30396.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
Length = 1394
Score = 201 bits (511), Expect(2) = 4e-60
Identities = 103/111 (92%), Positives = 105/111 (94%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1249 FSPGELIGLLRAERMGRALEEAVCYRAVLLGITRASLNTQSFISEASFQETARVLAKAAL 1308
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIP+GTG KGLVPPSKQ N S LETKK NLFEG
Sbjct: 1309 RGRIDWLKGLKENVVLGGMIPLGTGFKGLVPPSKQDNNSLLETKKKNLFEG 1359
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1223 HNRHIEIIVRQITSKVLVSEDGMSNVF 1249
>ref|YP_004376411.1| RNA polymerase beta'' chain [Olea europaea subsp. europaea]
gi|334701878|ref|YP_004564487.1| RNA polymerase beta''
chain [Olea europaea subsp. maroccana]
gi|328795423|emb|CBR30304.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|334084391|emb|CBR23819.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
gi|334084854|emb|CBS29226.1| RNA polymerase beta'' chain
[Olea europaea subsp. maroccana]
gi|334085026|emb|CBR23728.1| RNA polymerase beta'' chain
[Olea europaea subsp. cuspidata]
Length = 1394
Score = 201 bits (511), Expect(2) = 4e-60
Identities = 103/111 (92%), Positives = 105/111 (94%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1249 FSPGELIGLLRAERMGRALEEAVCYRAVLLGITRASLNTQSFISEASFQETARVLAKAAL 1308
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIP+GTG KGLVPPSKQ N S LETKK NLFEG
Sbjct: 1309 RGRIDWLKGLKENVVLGGMIPLGTGFKGLVPPSKQDNNSLLETKKKNLFEG 1359
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1223 HNRHIEIIVRQITSKVLVSEDGMSNVF 1249
>gb|ADD72079.1| RNA polymerase beta' subunit [Olea europaea]
gi|334084477|emb|CBR24610.1| RNA polymerase beta'' chain
[Olea europaea subsp. europaea]
gi|510934394|emb|CCQ09092.1| RNA polymerase beta'' chain
(chloroplast) [Olea europaea subsp. europaea]
Length = 1394
Score = 201 bits (511), Expect(2) = 4e-60
Identities = 103/111 (92%), Positives = 105/111 (94%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1249 FSPGELIGLLRAERMGRALEEAVCYRAVLLGITRASLNTQSFISEASFQETARVLAKAAL 1308
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIP+GTG KGLVPPSKQ N S LETKK NLFEG
Sbjct: 1309 RGRIDWLKGLKENVVLGGMIPLGTGFKGLVPPSKQDNNSLLETKKKNLFEG 1359
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1223 HNRHIEIIVRQITSKVLVSEDGMSNVF 1249
>ref|YP_003359349.2| RNA polymerase beta II subunit (chloroplast) [Olea europaea]
gi|363413081|gb|ADA69916.2| RNA polymerase beta II
subunit (chloroplast) [Olea europaea]
Length = 1390
Score = 201 bits (511), Expect(2) = 4e-60
Identities = 103/111 (92%), Positives = 105/111 (94%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEAVCYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1245 FSPGELIGLLRAERMGRALEEAVCYRAVLLGITRASLNTQSFISEASFQETARVLAKAAL 1304
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIP+GTG KGLVPPSKQ N S LETKK NLFEG
Sbjct: 1305 RGRIDWLKGLKENVVLGGMIPLGTGFKGLVPPSKQDNNSLLETKKKNLFEG 1355
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1219 HNRHIEIIVRQITSKVLVSEDGMSNVF 1245
>gb|AHE41665.1| RNA polymerase beta' subunit, partial (chloroplast) [Philadelphus
coronarius]
Length = 1368
Score = 201 bits (511), Expect(2) = 4e-60
Identities = 101/111 (90%), Positives = 104/111 (93%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEE +CYRA+LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1223 FSPGELIGLLRAERMGRALEEGICYRAILLGITRASLNTQSFISEASFQETARVLAKAAL 1282
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGGMIPVGTG KGLV PS+QHN PLETKK NLFEG
Sbjct: 1283 RGRIDWLKGLKENVVLGGMIPVGTGFKGLVHPSRQHNNIPLETKKKNLFEG 1333
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1197 HNRHIEIIVRQITSKVLVSEDGMSNVF 1223
>sp|Q33C48.1|RPOC2_NICTO RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta''; Short=RNA polymerase subunit beta''
gi|80750911|dbj|BAE47987.1| RNA polymerase beta'' subunit
[Nicotiana tomentosiformis]
Length = 1392
Score = 200 bits (509), Expect(2) = 7e-60
Identities = 101/111 (90%), Positives = 104/111 (93%)
Frame = -3
Query: 334 FLPGELIGLLRAERMGRALEEAVCYRALLLGITRASLNTQSFISEASFQETARVLAKAAL 155
F PGELIGLLRAERMGRALEEA+CYR +LLGITRASLNTQSFISEASFQETARVLAKAAL
Sbjct: 1247 FSPGELIGLLRAERMGRALEEAICYRVVLLGITRASLNTQSFISEASFQETARVLAKAAL 1306
Query: 154 RGRIDWLKGLKENVVLGGMIPVGTGLKGLVPPSKQHNKSPLETKKNNLFEG 2
RGRIDWLKGLKENVVLGG+IPVGTG KGLV PSKQHN PLETKK NLFEG
Sbjct: 1307 RGRIDWLKGLKENVVLGGVIPVGTGFKGLVHPSKQHNNIPLETKKKNLFEG 1357
Score = 56.2 bits (134), Expect(2) = 7e-60
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -2
Query: 413 HNRHIEIIVRQITSKVLVSEDGMSNVF 333
HNRHIEIIVRQITSKVLVSEDGMSNVF
Sbjct: 1221 HNRHIEIIVRQITSKVLVSEDGMSNVF 1247